RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 SLC5A6Q9Y289 635 aa7.8□□□□□ -1.16
SNCA-206ENST00000420646 FAM47E-STBD1D6RA91 191 aa7.8□□□□□ -1.16
SNCA-206ENST00000420646 ZZEF1O43149 2961 aa7.8□□□□□ -1.16
SNCA-206ENST00000420646 HPXP02790 462 aa7.8□□□□□ -1.16
SNCA-206ENST00000420646 PATE4P0C8F1 98 aa7.8□□□□□ -1.16
SNCA-206ENST00000420646 S100A1P23297 94 aa7.8□□□□□ -1.16
SNCA-206ENST00000420646 AVPR2P30518 371 aa7.8□□□□□ -1.16
SNCA-206ENST00000420646 PITPNAQ00169 270 aa7.8□□□□□ -1.16
SNCA-206ENST00000420646 NHLH1Q02575 133 aa7.8□□□□□ -1.16
SNCA-206ENST00000420646 MOGAT2Q3SYC2 334 aa7.8□□□□□ -1.16
SNCA-206ENST00000420646 ACER2Q5QJU3 275 aa7.8□□□□□ -1.16
SNCA-206ENST00000420646 ATP1A1-AS1Q5TC04 95 aa7.8□□□□□ -1.16
SNCA-206ENST00000420646 DNM1P34Q6PK57 102 aa7.8□□□□□ -1.16
SNCA-206ENST00000420646 DBX2Q6ZNG2 339 aa7.8□□□□□ -1.16
SNCA-206ENST00000420646 GTPBP8Q8N3Z3 284 aaPredicted RBP7.8□□□□□ -1.16
SNCA-206ENST00000420646 OR4D6Q8NGJ1 314 aa7.8□□□□□ -1.16
SNCA-206ENST00000420646 PHYHIPQ92561 330 aa7.8□□□□□ -1.16
SNCA-206ENST00000420646 CMBLQ96DG6 245 aa7.8□□□□□ -1.16
SNCA-206ENST00000420646 RBM24Q9BX46 236 aaKnown RBP7.8□□□□□ -1.16
SNCA-206ENST00000420646 HRASLSQ9HDD0 168 aa7.8□□□□□ -1.16
SNCA-206ENST00000420646 IL17BQ9UHF5 180 aa7.8□□□□□ -1.16
SNCA-206ENST00000420646 FREM1Q5H8C1 2179 aa7.79□□□□□ -1.16
SNCA-206ENST00000420646 TMEM272A0A1B0GTI8 110 aa7.79□□□□□ -1.16
SNCA-206ENST00000420646 A0A1W2PNV4 684 aa7.79□□□□□ -1.16
SNCA-206ENST00000420646 AQP7P3A6NL99 342 aa7.79□□□□□ -1.16
SNCA-206ENST00000420646 CENPBD1B2RD01 187 aa7.79□□□□□ -1.16
SNCA-206ENST00000420646 AKR7A2O43488 359 aa7.79□□□□□ -1.16
SNCA-206ENST00000420646 CTAG2O75638 210 aa7.79□□□□□ -1.16
SNCA-206ENST00000420646 IGHV3-9P01782 118 aa7.79□□□□□ -1.16
SNCA-206ENST00000420646 GP1BAP07359 652 aa7.79□□□□□ -1.16
SNCA-206ENST00000420646 CCR9P51686 369 aa7.79□□□□□ -1.16
SNCA-206ENST00000420646 BLVRAP53004 296 aa7.79□□□□□ -1.16
SNCA-206ENST00000420646 SUCLG1P53597 346 aaKnown RBP7.79□□□□□ -1.16
SNCA-206ENST00000420646 SPEM2Q0P670 501 aa7.79□□□□□ -1.16
SNCA-206ENST00000420646 THEM4Q5T1C6 240 aa7.79□□□□□ -1.16
SNCA-206ENST00000420646 OR11H7Q8NGC8 314 aa7.79□□□□□ -1.16
SNCA-206ENST00000420646 OR52N4Q8NGI2 321 aa7.79□□□□□ -1.16
SNCA-206ENST00000420646 OR13C9Q8NGT0 318 aa7.79□□□□□ -1.16
SNCA-206ENST00000420646 OR6N1Q8NGY5 312 aa7.79□□□□□ -1.16
SNCA-206ENST00000420646 OR14L1PQ8NHC6 308 aa7.79□□□□□ -1.16
SNCA-206ENST00000420646 THOC3Q96J01 351 aaKnown RBP7.79□□□□□ -1.16
SNCA-206ENST00000420646 FAM71F1Q96KD3 344 aaPredicted RBP7.79□□□□□ -1.16
SNCA-206ENST00000420646 OXGR1Q96P68 337 aa7.79□□□□□ -1.16
SNCA-206ENST00000420646 SNX18Q96RF0 628 aa7.79□□□□□ -1.16
SNCA-206ENST00000420646 ZNF416Q9BWM5 594 aa7.79□□□□□ -1.16
SNCA-206ENST00000420646 MFRPQ9BY79 579 aa7.79□□□□□ -1.16
SNCA-206ENST00000420646 ATG5Q9H1Y0 275 aa7.79□□□□□ -1.16
SNCA-206ENST00000420646 FAM206AQ9NX38 181 aa7.79□□□□□ -1.16
SNCA-206ENST00000420646 STMN3Q9NZ72 180 aa7.79□□□□□ -1.16
SNCA-206ENST00000420646 AKAP7Q9P0M2 348 aaPredicted RBP7.79□□□□□ -1.16
SNCA-206ENST00000420646 HHLA2Q9UM44 414 aa7.79□□□□□ -1.16
SNCA-206ENST00000420646 MYO7BQ6PIF6 2116 aa7.79□□□□□ -1.16
SNCA-206ENST00000420646 RAF1P04049 648 aa7.79□□□□□ -1.16
SNCA-206ENST00000420646 ALDOBP05062 364 aa7.79□□□□□ -1.16
SNCA-206ENST00000420646 CELA3AP09093 270 aa7.79□□□□□ -1.16
SNCA-206ENST00000420646 DBHP09172 617 aa7.79□□□□□ -1.16
SNCA-206ENST00000420646 EIF1P41567 113 aaKnown RBP7.79□□□□□ -1.16
SNCA-206ENST00000420646 VEGFCP49767 419 aa7.79□□□□□ -1.16
SNCA-206ENST00000420646 DLX5P56178 289 aa7.79□□□□□ -1.16
SNCA-206ENST00000420646 RRAS2P62070 204 aaPredicted RBP7.79□□□□□ -1.16
SNCA-206ENST00000420646 CHAF1BQ13112 559 aa7.79□□□□□ -1.16
SNCA-206ENST00000420646 TGIF1Q15583 401 aa7.79□□□□□ -1.16
SNCA-206ENST00000420646 PCK2Q16822 640 aa7.79□□□□□ -1.16
SNCA-206ENST00000420646 FDX2Q6P4F2 183 aa7.79□□□□□ -1.16
SNCA-206ENST00000420646 LINC00696Q6ZRV3 163 aa7.79□□□□□ -1.16
SNCA-206ENST00000420646 ZNF627Q7L945 461 aa7.79□□□□□ -1.16
SNCA-206ENST00000420646 ZNF454Q8N9F8 522 aa7.79□□□□□ -1.16
SNCA-206ENST00000420646 FCAMRQ8WWV6 532 aa7.79□□□□□ -1.16
SNCA-206ENST00000420646 PSMF1Q92530 271 aa7.79□□□□□ -1.16
SNCA-206ENST00000420646 CREB3L1Q96BA8 519 aa7.79□□□□□ -1.16
SNCA-206ENST00000420646 PBOV1Q9GZY1 135 aa7.79□□□□□ -1.16
SNCA-206ENST00000420646 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.79□□□□□ -1.16
SNCA-206ENST00000420646 DPAGT1Q9H3H5 408 aa7.79□□□□□ -1.16
SNCA-206ENST00000420646 C1orf198Q9H425 327 aa7.79□□□□□ -1.16
SNCA-206ENST00000420646 SH2D2AQ9NP31 389 aa7.79□□□□□ -1.16
SNCA-206ENST00000420646 NPAP1Q9NZP6 1156 aa7.79□□□□□ -1.16
SNCA-206ENST00000420646 KLHL9Q9P2J3 617 aa7.79□□□□□ -1.16
SNCA-206ENST00000420646 OR5H15A6NDH6 313 aa7.78□□□□□ -1.16
SNCA-206ENST00000420646 PRR33A8MZF0 331 aa7.78□□□□□ -1.16
SNCA-206ENST00000420646 B4E171 279 aa7.78□□□□□ -1.16
SNCA-206ENST00000420646 F5H5K5 113 aa7.78□□□□□ -1.16
SNCA-206ENST00000420646 DLSTP36957 453 aa7.78□□□□□ -1.16
SNCA-206ENST00000420646 TSPAN7P41732 249 aa7.78□□□□□ -1.16
SNCA-206ENST00000420646 DSCR4P56555 118 aaPredicted RBP7.78□□□□□ -1.16
SNCA-206ENST00000420646 H3F3AP84243 136 aa7.78□□□□□ -1.16
SNCA-206ENST00000420646 SRYQ05066 204 aa7.78□□□□□ -1.16
SNCA-206ENST00000420646 TAF13Q15543 124 aa7.78□□□□□ -1.16
SNCA-206ENST00000420646 RAB11BQ15907 218 aa7.78□□□□□ -1.16
SNCA-206ENST00000420646 ST3GAL2Q16842 350 aa7.78□□□□□ -1.16
SNCA-206ENST00000420646 CREB3L2Q70SY1 520 aa7.78□□□□□ -1.16
SNCA-206ENST00000420646 ABHD12BQ7Z5M8 362 aaPredicted RBP7.78□□□□□ -1.16
SNCA-206ENST00000420646 NAXDQ8IW45 347 aa7.78□□□□□ -1.16
SNCA-206ENST00000420646 OR6S1Q8NH40 331 aa7.78□□□□□ -1.16
SNCA-206ENST00000420646 NPRL2Q8WTW4 380 aa7.78□□□□□ -1.16
SNCA-206ENST00000420646 GIMAP1Q8WWP7 306 aa7.78□□□□□ -1.16
SNCA-206ENST00000420646 ZNF845Q96IR2 970 aaPredicted RBP7.78□□□□□ -1.16
SNCA-206ENST00000420646 B3GNT4Q9C0J1 378 aa7.78□□□□□ -1.16
SNCA-206ENST00000420646 ZNF222Q9UK12 451 aa7.78□□□□□ -1.16
SNCA-206ENST00000420646 SYT7O43581 403 aa7.78□□□□□ -1.16
SNCA-206ENST00000420646 KRT33AO76009 404 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms