RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 TMEM212A6NML5 194 aa12.47□□□□□ -0.41
SHMT1P1-201ENST00000419974 RER1O15258 196 aa12.47□□□□□ -0.41
SHMT1P1-201ENST00000419974 UBL3O95164 117 aa12.47□□□□□ -0.41
SHMT1P1-201ENST00000419974 SERPINA3P01011 423 aa12.47□□□□□ -0.41
SHMT1P1-201ENST00000419974 H2BFMP0C1H6 154 aa12.47□□□□□ -0.41
SHMT1P1-201ENST00000419974 B4GALT1P15291 398 aa12.47□□□□□ -0.41
SHMT1P1-201ENST00000419974 CRYGSP22914 178 aa12.47□□□□□ -0.41
SHMT1P1-201ENST00000419974 IGHV1-2P23083 117 aa12.47□□□□□ -0.41
SHMT1P1-201ENST00000419974 GTF2A1P52655 376 aaPredicted RBP12.47□□□□□ -0.41
SHMT1P1-201ENST00000419974 PSMA6P60900 246 aaKnown RBP12.47□□□□□ -0.41
SHMT1P1-201ENST00000419974 ALKBH1Q13686 389 aaKnown RBP12.47□□□□□ -0.41
SHMT1P1-201ENST00000419974 ZNF829Q3KNS6 432 aaPredicted RBP12.47□□□□□ -0.41
SHMT1P1-201ENST00000419974 YIF1BQ5BJH7 314 aa12.47□□□□□ -0.41
SHMT1P1-201ENST00000419974 CORO6Q6QEF8 472 aa12.47□□□□□ -0.41
SHMT1P1-201ENST00000419974 LRRN1Q6UXK5 716 aa12.47□□□□□ -0.41
SHMT1P1-201ENST00000419974 SSX8Q7RTT4 187 aa12.47□□□□□ -0.41
SHMT1P1-201ENST00000419974 MRGPRGQ86SM5 289 aa12.47□□□□□ -0.41
SHMT1P1-201ENST00000419974 ZNF433Q8N7K0 673 aaPredicted RBP12.47□□□□□ -0.41
SHMT1P1-201ENST00000419974 CNEP1R1Q8N9A8 125 aa12.47□□□□□ -0.41
SHMT1P1-201ENST00000419974 NANOS1Q8WY41 292 aaKnown RBP12.47□□□□□ -0.41
SHMT1P1-201ENST00000419974 THRSPQ92748 146 aa12.47□□□□□ -0.41
SHMT1P1-201ENST00000419974 C4orf45Q96LM5 186 aa12.47□□□□□ -0.41
SHMT1P1-201ENST00000419974 ATF6BQ99941 703 aa12.47□□□□□ -0.41
SHMT1P1-201ENST00000419974 B3GNT2Q9NY97 397 aa12.47□□□□□ -0.41
SHMT1P1-201ENST00000419974 FRRS1LQ9P0K9 344 aa12.47□□□□□ -0.41
SHMT1P1-201ENST00000419974 IKZF2Q9UKS7 526 aa12.47□□□□□ -0.41
SHMT1P1-201ENST00000419974 FBXL3Q9UKT7 428 aa12.47□□□□□ -0.41
SHMT1P1-201ENST00000419974 MEMO1Q9Y316 297 aa12.47□□□□□ -0.41
SHMT1P1-201ENST00000419974 TRBV2A0A0J9YWF9 115 aa12.46□□□□□ -0.41
SHMT1P1-201ENST00000419974 OR4C45A6NMZ5 311 aa12.46□□□□□ -0.41
SHMT1P1-201ENST00000419974 A8MXE2 369 aa12.46□□□□□ -0.41
SHMT1P1-201ENST00000419974 H3BMQ9 156 aa12.46□□□□□ -0.41
SHMT1P1-201ENST00000419974 SGCEO43556 437 aa12.46□□□□□ -0.41
SHMT1P1-201ENST00000419974 GATBO75879 557 aaKnown RBP12.46□□□□□ -0.41
SHMT1P1-201ENST00000419974 IGHV3-9P01782 118 aa12.46□□□□□ -0.41
SHMT1P1-201ENST00000419974 PSMB1P20618 241 aaKnown RBP12.46□□□□□ -0.41
SHMT1P1-201ENST00000419974 UGT2B10P36537 528 aa12.46□□□□□ -0.41
SHMT1P1-201ENST00000419974 PSG4Q00888 419 aa12.46□□□□□ -0.41
SHMT1P1-201ENST00000419974 GABRA6Q16445 453 aa12.46□□□□□ -0.41
SHMT1P1-201ENST00000419974 RSPO1Q2MKA7 263 aaPredicted RBP12.46□□□□□ -0.41
SHMT1P1-201ENST00000419974 KLHL24Q6TFL4 600 aa12.46□□□□□ -0.41
SHMT1P1-201ENST00000419974 Q6ZSR3 168 aa12.46□□□□□ -0.41
SHMT1P1-201ENST00000419974 PRSS45Q7RTY3 260 aa12.46□□□□□ -0.41
SHMT1P1-201ENST00000419974 CATSPERDQ86XM0 798 aa12.46□□□□□ -0.41
SHMT1P1-201ENST00000419974 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.46□□□□□ -0.41
SHMT1P1-201ENST00000419974 RPRMLQ8N4K4 120 aa12.46□□□□□ -0.41
SHMT1P1-201ENST00000419974 IL17RDQ8NFM7 739 aa12.46□□□□□ -0.41
SHMT1P1-201ENST00000419974 GHSRQ92847 366 aa12.46□□□□□ -0.41
SHMT1P1-201ENST00000419974 SH3GL3Q99963 347 aa12.46□□□□□ -0.41
SHMT1P1-201ENST00000419974 OR2H1Q9GZK4 316 aa12.46□□□□□ -0.41
SHMT1P1-201ENST00000419974 G6PC2Q9NQR9 355 aa12.46□□□□□ -0.41
SHMT1P1-201ENST00000419974 FAM206AQ9NX38 181 aa12.46□□□□□ -0.41
SHMT1P1-201ENST00000419974 ELOVL5Q9NYP7 299 aa12.46□□□□□ -0.41
SHMT1P1-201ENST00000419974 TINAGQ9UJW2 476 aa12.46□□□□□ -0.41
SHMT1P1-201ENST00000419974 ZNF281Q9Y2X9 895 aa12.46□□□□□ -0.41
SHMT1P1-201ENST00000419974 A0A0G2JNJ9 132 aa12.45□□□□□ -0.42
SHMT1P1-201ENST00000419974 TMEM269A0A1B0GVZ9 245 aa12.45□□□□□ -0.42
SHMT1P1-201ENST00000419974 MAGEB4O15481 346 aaPredicted RBP12.45□□□□□ -0.42
SHMT1P1-201ENST00000419974 AIREO43918 545 aa12.45□□□□□ -0.42
SHMT1P1-201ENST00000419974 ICMTO60725 284 aa12.45□□□□□ -0.42
SHMT1P1-201ENST00000419974 NOL3O60936 208 aaKnown RBP12.45□□□□□ -0.42
SHMT1P1-201ENST00000419974 ZFPL1O95159 310 aa12.45□□□□□ -0.42
SHMT1P1-201ENST00000419974 WNT11O96014 354 aa12.45□□□□□ -0.42
SHMT1P1-201ENST00000419974 ZNF32P17041 273 aa12.45□□□□□ -0.42
SHMT1P1-201ENST00000419974 GADD45AP24522 165 aa12.45□□□□□ -0.42
SHMT1P1-201ENST00000419974 FOXG1P55316 489 aaPredicted RBP12.45□□□□□ -0.42
SHMT1P1-201ENST00000419974 NANOS3P60323 173 aaKnown RBP12.45□□□□□ -0.42
SHMT1P1-201ENST00000419974 RPS11P62280 158 aaKnown RBP eCLIP12.45□□□□□ -0.42
SHMT1P1-201ENST00000419974 PMPCAQ10713 525 aa12.45□□□□□ -0.42
SHMT1P1-201ENST00000419974 C3orf36Q3SXR2 165 aa12.45□□□□□ -0.42
SHMT1P1-201ENST00000419974 SFRP5Q5T4F7 317 aa12.45□□□□□ -0.42
SHMT1P1-201ENST00000419974 DRAM2Q6UX65 266 aa12.45□□□□□ -0.42
SHMT1P1-201ENST00000419974 PAMR1Q6UXH9 720 aa12.45□□□□□ -0.42
SHMT1P1-201ENST00000419974 UNQ9370/PRO34162Q6UXP9 181 aa12.45□□□□□ -0.42
SHMT1P1-201ENST00000419974 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.45□□□□□ -0.42
SHMT1P1-201ENST00000419974 LRRC18Q8N456 261 aa12.45□□□□□ -0.42
SHMT1P1-201ENST00000419974 ZNF610Q8N9Z0 462 aa12.45□□□□□ -0.42
SHMT1P1-201ENST00000419974 CCDC54Q8NEL0 328 aa12.45□□□□□ -0.42
SHMT1P1-201ENST00000419974 OR1F12Q8NHA8 337 aa12.45□□□□□ -0.42
SHMT1P1-201ENST00000419974 RND1Q92730 232 aa12.45□□□□□ -0.42
SHMT1P1-201ENST00000419974 SPTSSAQ969W0 71 aa12.45□□□□□ -0.42
SHMT1P1-201ENST00000419974 C12orf43Q96C57 262 aaKnown RBP12.45□□□□□ -0.42
SHMT1P1-201ENST00000419974 ZNF75AQ96N20 296 aa12.45□□□□□ -0.42
SHMT1P1-201ENST00000419974 DACH2Q96NX9 599 aa12.45□□□□□ -0.42
SHMT1P1-201ENST00000419974 DCLRE1CQ96SD1 692 aaKnown RBP12.45□□□□□ -0.42
SHMT1P1-201ENST00000419974 WNT5BQ9H1J7 359 aa12.45□□□□□ -0.42
SHMT1P1-201ENST00000419974 SP140LQ9H930 580 aa12.45□□□□□ -0.42
SHMT1P1-201ENST00000419974 SLC17A5Q9NRA2 495 aa12.45□□□□□ -0.42
SHMT1P1-201ENST00000419974 GALNT8Q9NY28 637 aa12.45□□□□□ -0.42
SHMT1P1-201ENST00000419974 Q9UFV3 132 aa12.45□□□□□ -0.42
SHMT1P1-201ENST00000419974 NUFIP1Q9UHK0 495 aaKnown RBP12.45□□□□□ -0.42
SHMT1P1-201ENST00000419974 SSR3Q9UNL2 185 aa12.45□□□□□ -0.42
SHMT1P1-201ENST00000419974 SHANK1Q9Y566 2161 aa12.45□□□□□ -0.42
SHMT1P1-201ENST00000419974 GTF3C1Q12789 2109 aa12.45□□□□□ -0.42
SHMT1P1-201ENST00000419974 MED12LQ86YW9 2145 aa12.45□□□□□ -0.42
SHMT1P1-201ENST00000419974 J3QW42 95 aa12.44□□□□□ -0.42
SHMT1P1-201ENST00000419974 DVL2O14641 736 aa12.44□□□□□ -0.42
SHMT1P1-201ENST00000419974 GPX5O75715 221 aa12.44□□□□□ -0.42
SHMT1P1-201ENST00000419974 PNPP00491 289 aa12.44□□□□□ -0.42
SHMT1P1-201ENST00000419974 IGLV3-1P01715 115 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms