RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 EXD3Q8N9H8 876 aa7.21□□□□□ -1.25
HMGXB4-202ENST00000418170 RSC1A1Q92681 617 aa7.21□□□□□ -1.25
HMGXB4-202ENST00000418170 NUS1Q96E22 293 aa7.21□□□□□ -1.25
HMGXB4-202ENST00000418170 DCBLD2Q96PD2 775 aa7.21□□□□□ -1.25
HMGXB4-202ENST00000418170 TSSK2Q96PF2 358 aa7.21□□□□□ -1.25
HMGXB4-202ENST00000418170 SOX7Q9BT81 388 aa7.21□□□□□ -1.25
HMGXB4-202ENST00000418170 TRIM2Q9C040 744 aa7.21□□□□□ -1.25
HMGXB4-202ENST00000418170 DUSP22Q9NRW4 184 aa7.21□□□□□ -1.25
HMGXB4-202ENST00000418170 GDE1Q9NZC3 331 aa7.21□□□□□ -1.25
HMGXB4-202ENST00000418170 LAMP5Q9UJQ1 280 aa7.21□□□□□ -1.25
HMGXB4-202ENST00000418170 LDLRAD4O15165 306 aa7.21□□□□□ -1.26
HMGXB4-202ENST00000418170 PMP2P02689 132 aa7.21□□□□□ -1.26
HMGXB4-202ENST00000418170 ACAA2P42765 397 aaKnown RBP7.21□□□□□ -1.26
HMGXB4-202ENST00000418170 LSSP48449 732 aa7.21□□□□□ -1.26
HMGXB4-202ENST00000418170 CASP6P55212 293 aa7.21□□□□□ -1.26
HMGXB4-202ENST00000418170 RAP1AP62834 184 aa7.21□□□□□ -1.26
HMGXB4-202ENST00000418170 RNF4P78317 190 aa7.21□□□□□ -1.26
HMGXB4-202ENST00000418170 SLC7A9P82251 487 aa7.21□□□□□ -1.26
HMGXB4-202ENST00000418170 EGR3Q06889 387 aa7.21□□□□□ -1.26
HMGXB4-202ENST00000418170 WDR38Q5JTN6 314 aa7.21□□□□□ -1.26
HMGXB4-202ENST00000418170 GLYATL3Q5SZD4 288 aa7.21□□□□□ -1.26
HMGXB4-202ENST00000418170 LHX8Q68G74 356 aa7.21□□□□□ -1.26
HMGXB4-202ENST00000418170 CLEC9AQ6UXN8 241 aa7.21□□□□□ -1.26
HMGXB4-202ENST00000418170 TGIF2LXQ8IUE1 241 aa7.21□□□□□ -1.26
HMGXB4-202ENST00000418170 AQP3Q92482 292 aa7.21□□□□□ -1.26
HMGXB4-202ENST00000418170 GALNT14Q96FL9 552 aa7.21□□□□□ -1.26
HMGXB4-202ENST00000418170 BCO1Q9HAY6 547 aa7.21□□□□□ -1.26
HMGXB4-202ENST00000418170 MKKSQ9NPJ1 570 aaPredicted RBP7.21□□□□□ -1.26
HMGXB4-202ENST00000418170 UBQLN4Q9NRR5 601 aa7.21□□□□□ -1.26
HMGXB4-202ENST00000418170 APOBEC3BQ9UH17 382 aaKnown RBP7.21□□□□□ -1.26
HMGXB4-202ENST00000418170 ZDHHC8Q9ULC8 765 aa7.21□□□□□ -1.26
HMGXB4-202ENST00000418170 C4orf47A7E2U8 309 aa7.21□□□□□ -1.26
HMGXB4-202ENST00000418170 HSPB2A8KAH6 182 aa7.21□□□□□ -1.26
HMGXB4-202ENST00000418170 SPINT1O43278 529 aa7.21□□□□□ -1.26
HMGXB4-202ENST00000418170 GPANK1O95872 356 aa7.21□□□□□ -1.26
HMGXB4-202ENST00000418170 EFEMP2O95967 443 aa7.21□□□□□ -1.26
HMGXB4-202ENST00000418170 ADH1CP00326 375 aa7.21□□□□□ -1.26
HMGXB4-202ENST00000418170 PET100P0DJ07 73 aa7.21□□□□□ -1.26
HMGXB4-202ENST00000418170 PRKAR2AP13861 404 aaKnown RBP7.21□□□□□ -1.26
HMGXB4-202ENST00000418170 C5AR1P21730 350 aa7.21□□□□□ -1.26
HMGXB4-202ENST00000418170 MNX1P50219 401 aaPredicted RBP7.21□□□□□ -1.26
HMGXB4-202ENST00000418170 ZNF157P51786 506 aaPredicted RBP7.21□□□□□ -1.26
HMGXB4-202ENST00000418170 BIKQ13323 160 aa7.21□□□□□ -1.26
HMGXB4-202ENST00000418170 HSPB2Q16082 182 aa7.21□□□□□ -1.26
HMGXB4-202ENST00000418170 TRMT12Q53H54 448 aaKnown RBP7.21□□□□□ -1.26
HMGXB4-202ENST00000418170 OR2A2Q6IF42 318 aa7.21□□□□□ -1.26
HMGXB4-202ENST00000418170 ZNF765Q7L2R6 523 aa7.21□□□□□ -1.26
HMGXB4-202ENST00000418170 FJX1Q86VR8 437 aa7.21□□□□□ -1.26
HMGXB4-202ENST00000418170 ACBD4Q8NC06 268 aa7.21□□□□□ -1.26
HMGXB4-202ENST00000418170 OR51F2Q8NH61 342 aa7.21□□□□□ -1.26
HMGXB4-202ENST00000418170 PMM1Q92871 262 aa7.21□□□□□ -1.26
HMGXB4-202ENST00000418170 GPX7Q96SL4 187 aaPredicted RBP7.21□□□□□ -1.26
HMGXB4-202ENST00000418170 INSM2Q96T92 566 aaPredicted RBP7.21□□□□□ -1.26
HMGXB4-202ENST00000418170 NUDT9Q9BW91 350 aa7.21□□□□□ -1.26
HMGXB4-202ENST00000418170 KCNK6Q9Y257 313 aa7.21□□□□□ -1.26
HMGXB4-202ENST00000418170 TMED3Q9Y3Q3 217 aa7.21□□□□□ -1.26
HMGXB4-202ENST00000418170 CACNA1CQ13936 2221 aa7.2□□□□□ -1.26
HMGXB4-202ENST00000418170 MANSC4A6NHS7 340 aaPredicted RBP7.2□□□□□ -1.26
HMGXB4-202ENST00000418170 BRINP1O60477 761 aa7.2□□□□□ -1.26
HMGXB4-202ENST00000418170 ADAP1O75689 374 aa7.2□□□□□ -1.26
HMGXB4-202ENST00000418170 TBC1D3HP0C7X1 549 aa7.2□□□□□ -1.26
HMGXB4-202ENST00000418170 COX5BP10606 129 aa7.2□□□□□ -1.26
HMGXB4-202ENST00000418170 CD37P11049 281 aa7.2□□□□□ -1.26
HMGXB4-202ENST00000418170 ALOX5APP20292 161 aa7.2□□□□□ -1.26
HMGXB4-202ENST00000418170 RAB6AP20340 208 aa7.2□□□□□ -1.26
HMGXB4-202ENST00000418170 RPS4XP62701 263 aaKnown RBP7.2□□□□□ -1.26
HMGXB4-202ENST00000418170 FOXO1Q12778 655 aa7.2□□□□□ -1.26
HMGXB4-202ENST00000418170 TOMM34Q15785 309 aaPredicted RBP7.2□□□□□ -1.26
HMGXB4-202ENST00000418170 TMEM128Q5BJH2 165 aa7.2□□□□□ -1.26
HMGXB4-202ENST00000418170 TMEM215Q68D42 235 aa7.2□□□□□ -1.26
HMGXB4-202ENST00000418170 TMEM225Q6GV28 225 aa7.2□□□□□ -1.26
HMGXB4-202ENST00000418170 TRAPPC6BQ86SZ2 158 aa7.2□□□□□ -1.26
HMGXB4-202ENST00000418170 TMEM25Q86YD3 366 aa7.2□□□□□ -1.26
HMGXB4-202ENST00000418170 MR1Q95460 341 aa7.2□□□□□ -1.26
HMGXB4-202ENST00000418170 VN1R3Q9BXE9 311 aa7.2□□□□□ -1.26
HMGXB4-202ENST00000418170 C19orf53Q9UNZ5 99 aaPredicted RBP7.2□□□□□ -1.26
HMGXB4-202ENST00000418170 AMDHD2Q9Y303 409 aa7.2□□□□□ -1.26
HMGXB4-202ENST00000418170 MRPS18BQ9Y676 258 aaKnown RBP7.2□□□□□ -1.26
HMGXB4-202ENST00000418170 MKRN2OSH3BPM6 223 aa7.2□□□□□ -1.26
HMGXB4-202ENST00000418170 NUDT21O43809 227 aaKnown RBP7.2□□□□□ -1.26
HMGXB4-202ENST00000418170 GAPDHP04406 335 aaKnown RBP7.2□□□□□ -1.26
HMGXB4-202ENST00000418170 F13BP05160 661 aa7.2□□□□□ -1.26
HMGXB4-202ENST00000418170 HPGDP15428 266 aa7.2□□□□□ -1.26
HMGXB4-202ENST00000418170 HRH1P35367 487 aa7.2□□□□□ -1.26
HMGXB4-202ENST00000418170 MIDNQ504T8 468 aa7.2□□□□□ -1.26
HMGXB4-202ENST00000418170 FHL5Q5TD97 284 aa7.2□□□□□ -1.26
HMGXB4-202ENST00000418170 METRNLQ641Q3 311 aa7.2□□□□□ -1.26
HMGXB4-202ENST00000418170 TCEAL6Q6IPX3 200 aa7.2□□□□□ -1.26
HMGXB4-202ENST00000418170 FDX2Q6P4F2 183 aa7.2□□□□□ -1.26
HMGXB4-202ENST00000418170 ULK3Q6PHR2 472 aa7.2□□□□□ -1.26
HMGXB4-202ENST00000418170 MDGA2Q7Z553 956 aa7.2□□□□□ -1.26
HMGXB4-202ENST00000418170 HIST3H2BBQ8N257 126 aa7.2□□□□□ -1.26
HMGXB4-202ENST00000418170 GVQW1Q8N7I0 195 aa7.2□□□□□ -1.26
HMGXB4-202ENST00000418170 ZNF610Q8N9Z0 462 aa7.2□□□□□ -1.26
HMGXB4-202ENST00000418170 OR9K2Q8NGE7 335 aa7.2□□□□□ -1.26
HMGXB4-202ENST00000418170 OR5T3Q8NGG3 340 aa7.2□□□□□ -1.26
HMGXB4-202ENST00000418170 PRO1933Q9H354 126 aa7.2□□□□□ -1.26
HMGXB4-202ENST00000418170 SCN2AQ99250 2005 aa7.2□□□□□ -1.26
HMGXB4-202ENST00000418170 ZNF726A6NNF4 738 aa7.2□□□□□ -1.26
HMGXB4-202ENST00000418170 FKTNO75072 461 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms