RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 ZMAT1Q5H9K5 638 aa18.24■□□□□ 0.51
CASC3-203ENST00000418132 FAM214BQ7L5A3 538 aa18.24■□□□□ 0.51
CASC3-203ENST00000418132 CISD2Q8N5K1 135 aaKnown RBP18.24■□□□□ 0.51
CASC3-203ENST00000418132 TEX19Q8NA77 164 aa18.24■□□□□ 0.51
CASC3-203ENST00000418132 C9orf106Q8NAJ2 232 aa18.24■□□□□ 0.51
CASC3-203ENST00000418132 COMMD4Q9H0A8 199 aa18.24■□□□□ 0.51
CASC3-203ENST00000418132 PPIL3Q9H2H8 161 aaKnown RBP18.24■□□□□ 0.51
CASC3-203ENST00000418132 C12orf49Q9H741 205 aa18.24■□□□□ 0.51
CASC3-203ENST00000418132 CRNNQ9UBG3 495 aaPredicted RBP18.24■□□□□ 0.51
CASC3-203ENST00000418132 MALT1Q9UDY8 824 aa18.24■□□□□ 0.51
CASC3-203ENST00000418132 EMC9Q9Y3B6 208 aa18.24■□□□□ 0.51
CASC3-203ENST00000418132 SPENQ96T58 3664 aaKnown RBP18.24■□□□□ 0.51
CASC3-203ENST00000418132 GABRA1P14867 456 aa18.24■□□□□ 0.51
CASC3-203ENST00000418132 MXD1Q05195 221 aa18.24■□□□□ 0.51
CASC3-203ENST00000418132 OR2A2Q6IF42 318 aa18.24■□□□□ 0.51
CASC3-203ENST00000418132 KLHL24Q6TFL4 600 aa18.24■□□□□ 0.51
CASC3-203ENST00000418132 PAMR1Q6UXH9 720 aa18.24■□□□□ 0.51
CASC3-203ENST00000418132 ZNF813Q6ZN06 617 aa18.24■□□□□ 0.51
CASC3-203ENST00000418132 SYT9Q86SS6 491 aa18.24■□□□□ 0.51
CASC3-203ENST00000418132 ZNF676Q8N7Q3 588 aa18.24■□□□□ 0.51
CASC3-203ENST00000418132 G6PC2Q9NQR9 355 aa18.24■□□□□ 0.51
CASC3-203ENST00000418132 PRSS50Q9UI38 385 aa18.24■□□□□ 0.51
CASC3-203ENST00000418132 SLC22A13Q9Y226 551 aa18.24■□□□□ 0.51
CASC3-203ENST00000418132 DOCK7Q96N67 2140 aa18.23■□□□□ 0.51
CASC3-203ENST00000418132 TMEM269A0A1B0GVZ9 245 aa18.23■□□□□ 0.51
CASC3-203ENST00000418132 SHISA3A0PJX4 238 aa18.23■□□□□ 0.51
CASC3-203ENST00000418132 LOC110117498-PIK3R3F6TDL0 507 aa18.23■□□□□ 0.51
CASC3-203ENST00000418132 WDR1O75083 606 aa18.23■□□□□ 0.51
CASC3-203ENST00000418132 CTSSP25774 331 aa18.23■□□□□ 0.51
CASC3-203ENST00000418132 ARF1P84077 181 aaKnown RBP18.23■□□□□ 0.51
CASC3-203ENST00000418132 CCDC92Q53HC0 331 aaPredicted RBP18.23■□□□□ 0.51
CASC3-203ENST00000418132 FAM27D1Q5T7N8 215 aa18.23■□□□□ 0.51
CASC3-203ENST00000418132 FBXW9Q5XUX1 488 aa18.23■□□□□ 0.51
CASC3-203ENST00000418132 GCNT2Q8N0V5 402 aa18.23■□□□□ 0.51
CASC3-203ENST00000418132 UBE2J2Q8N2K1 259 aa18.23■□□□□ 0.51
CASC3-203ENST00000418132 PHYHIPQ92561 330 aa18.23■□□□□ 0.51
CASC3-203ENST00000418132 SLC25A46Q96AG3 418 aa18.23■□□□□ 0.51
CASC3-203ENST00000418132 WACQ9BTA9 647 aa18.23■□□□□ 0.51
CASC3-203ENST00000418132 FAM206AQ9NX38 181 aa18.23■□□□□ 0.51
CASC3-203ENST00000418132 TMEM8BA6NDV4 472 aa18.22■□□□□ 0.51
CASC3-203ENST00000418132 MBD3L4A6NDZ8 208 aaPredicted RBP18.22■□□□□ 0.51
CASC3-203ENST00000418132 MBD3L3A6NE82 208 aaPredicted RBP18.22■□□□□ 0.51
CASC3-203ENST00000418132 MBD3L5A6NJ08 208 aaPredicted RBP18.22■□□□□ 0.51
CASC3-203ENST00000418132 UPK1BO75841 260 aa18.22■□□□□ 0.51
CASC3-203ENST00000418132 CLEC2LP0C7M8 214 aa18.22■□□□□ 0.51
CASC3-203ENST00000418132 PTGER4P35408 488 aa18.22■□□□□ 0.51
CASC3-203ENST00000418132 FOXG1P55316 489 aaPredicted RBP18.22■□□□□ 0.51
CASC3-203ENST00000418132 GRB2P62993 217 aaKnown RBP18.22■□□□□ 0.51
CASC3-203ENST00000418132 FAPQ12884 760 aa18.22■□□□□ 0.51
CASC3-203ENST00000418132 ABHD12BQ7Z5M8 362 aaPredicted RBP18.22■□□□□ 0.51
CASC3-203ENST00000418132 CCDC190Q86UF4 302 aa18.22■□□□□ 0.51
CASC3-203ENST00000418132 MBD3L2Q8NHZ7 208 aaPredicted RBP18.22■□□□□ 0.51
CASC3-203ENST00000418132 PPP1R14AQ96A00 147 aa18.22■□□□□ 0.51
CASC3-203ENST00000418132 OR14A2Q96R54 314 aa18.22■□□□□ 0.51
CASC3-203ENST00000418132 SLX1AQ9BQ83 275 aa18.22■□□□□ 0.51
CASC3-203ENST00000418132 SMURF1Q9HCE7 757 aa18.22■□□□□ 0.51
CASC3-203ENST00000418132 RHBDL2Q9NX52 303 aa18.22■□□□□ 0.51
CASC3-203ENST00000418132 ZZEF1O43149 2961 aa18.22■□□□□ 0.51
CASC3-203ENST00000418132 TRBV5-5A0A0J9YX44 114 aa18.22■□□□□ 0.51
CASC3-203ENST00000418132 FARS2O95363 451 aaKnown RBP18.22■□□□□ 0.51
CASC3-203ENST00000418132 TPOP07202 933 aa18.22■□□□□ 0.51
CASC3-203ENST00000418132 UCHL1P09936 223 aa18.22■□□□□ 0.51
CASC3-203ENST00000418132 HSD11B1P28845 292 aa18.22■□□□□ 0.51
CASC3-203ENST00000418132 ETV6P41212 452 aa18.22■□□□□ 0.51
CASC3-203ENST00000418132 MTNR1BP49286 362 aa18.22■□□□□ 0.51
CASC3-203ENST00000418132 PSMA6P60900 246 aaKnown RBP18.22■□□□□ 0.51
CASC3-203ENST00000418132 TAF13Q15543 124 aa18.22■□□□□ 0.51
CASC3-203ENST00000418132 ELFN2Q5R3F8 820 aa18.22■□□□□ 0.51
CASC3-203ENST00000418132 SKA3Q8IX90 412 aa18.22■□□□□ 0.51
CASC3-203ENST00000418132 ATF6BQ99941 703 aa18.22■□□□□ 0.51
CASC3-203ENST00000418132 ABCB10Q9NRK6 738 aa18.22■□□□□ 0.51
CASC3-203ENST00000418132 OR52A1Q9UKL2 312 aa18.22■□□□□ 0.51
CASC3-203ENST00000418132 GTF2A1LQ9UNN4 478 aa18.22■□□□□ 0.51
CASC3-203ENST00000418132 SLC5A6Q9Y289 635 aa18.22■□□□□ 0.51
CASC3-203ENST00000418132 DSPP15924 2871 aaKnown RBP18.22■□□□□ 0.51
CASC3-203ENST00000418132 ZNF879B4DU55 563 aa18.21■□□□□ 0.51
CASC3-203ENST00000418132 ARL6IP5O75915 188 aa18.21■□□□□ 0.51
CASC3-203ENST00000418132 KIR2DL2P43627 348 aaPredicted RBP18.21■□□□□ 0.51
CASC3-203ENST00000418132 PCBD1P61457 104 aa18.21■□□□□ 0.51
CASC3-203ENST00000418132 SCRN3Q0VDG4 424 aa18.21■□□□□ 0.51
CASC3-203ENST00000418132 Q499Y3 187 aa18.21■□□□□ 0.51
CASC3-203ENST00000418132 SPANXN2Q5MJ10 180 aa18.21■□□□□ 0.51
CASC3-203ENST00000418132 RTL6Q6ICC9 239 aa18.21■□□□□ 0.51
CASC3-203ENST00000418132 SLC16A14Q7RTX9 510 aa18.21■□□□□ 0.51
CASC3-203ENST00000418132 FAM57AQ8TBR7 257 aa18.21■□□□□ 0.51
CASC3-203ENST00000418132 SNRNP40Q96DI7 357 aaKnown RBP18.21■□□□□ 0.51
CASC3-203ENST00000418132 PRORYQ9H606 182 aa18.21■□□□□ 0.51
CASC3-203ENST00000418132 FIGNL2A6NMB9 653 aa18.21■□□□□ 0.5
CASC3-203ENST00000418132 CASKO14936 926 aa18.21■□□□□ 0.5
CASC3-203ENST00000418132 TBX1O43435 398 aa18.21■□□□□ 0.5
CASC3-203ENST00000418132 TNFSF8P32971 234 aa18.21■□□□□ 0.5
CASC3-203ENST00000418132 TFAP2EQ6VUC0 442 aa18.21■□□□□ 0.5
CASC3-203ENST00000418132 SEM1Q6ZVN7 128 aa18.21■□□□□ 0.5
CASC3-203ENST00000418132 CD163Q86VB7 1156 aa18.21■□□□□ 0.5
CASC3-203ENST00000418132 LYSMD2Q8IV50 215 aa18.21■□□□□ 0.5
CASC3-203ENST00000418132 RDH10Q8IZV5 341 aa18.21■□□□□ 0.5
CASC3-203ENST00000418132 GPR148Q8TDV2 347 aa18.21■□□□□ 0.5
CASC3-203ENST00000418132 CEP19Q96LK0 163 aa18.21■□□□□ 0.5
CASC3-203ENST00000418132 KCNJ15Q99712 375 aa18.21■□□□□ 0.5
CASC3-203ENST00000418132 PLEK2Q9NYT0 353 aa18.21■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms