RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 RAMP2O60895 175 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 SLC25A12O75746 678 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 NEURL1O76050 574 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 SERPINA3P01011 423 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 MT-ND4LP03901 98 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 CYC1P08574 325 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 MELTFP08582 738 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 TSPAN19P0C672 248 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 NBEAP1P0C6P0 100 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 OR8U8P0C7N1 319 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 SLC35E2BP0CK96 405 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 SLC35E2P0CK97 266 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 IGHV4-31P0DP07 118 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 SCGB1A1P11684 91 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 ERCC2P18074 760 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 CCNOP22674 350 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 SLC6A1P30531 599 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 MAS1LP35410 378 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 GGT2P36268 569 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 VSX2P58304 361 aaPredicted RBP4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 AP3S2P59780 193 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 SELENOVP59797 346 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 SNRPEP62304 92 aaKnown RBP4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 EIF5AP63241 154 aaKnown RBP4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 OC90Q02509 493 aaPredicted RBP4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 BCL2L1Q07817 233 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 SERTAD2Q14140 314 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 LASP1Q14847 261 aaKnown RBP4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 PEA15Q15121 130 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 RPS6KA2Q15349 733 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 TRAM1Q15629 374 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 DEFB110Q30KQ9 67 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 SGO1Q5FBB7 561 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 ZNF311Q5JNZ3 666 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 CCDC144NLQ6NUI1 221 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 SLC30A6Q6NXT4 461 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 LPCAT3Q6P1A2 487 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 ATRAIDQ6UW56 229 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 COX15Q7KZN9 410 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 PRSS58Q8IYP2 241 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 OR4N4Q8N0Y3 316 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 DEFB106AQ8N104 65 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 ACBD7Q8N6N7 88 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 ZNF383Q8NA42 475 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 AQP11Q8NBQ7 271 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 OR4F6Q8NGB9 312 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 OR1S1Q8NH92 325 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 BBS10Q8TAM1 723 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 RDH11Q8TC12 318 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 SLC25A43Q8WUT9 341 aaPredicted RBP4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 ASB10Q8WXI3 467 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 TFGQ92734 400 aaPredicted RBP4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 DPF1Q92782 380 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 FAF2Q96CS3 445 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 PHF21BQ96EK2 531 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 SMIM12Q96EX1 92 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 PHYHIPLQ96FC7 376 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 FCRL1Q96LA6 429 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 ZNF48Q96MX3 618 aaPredicted RBP4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 MUS81Q96NY9 551 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 FOXN4Q96NZ1 517 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 PCDHB18PQ96TA0 734 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 TSNAXQ99598 290 aaKnown RBP4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 RBBP8Q99708 897 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 HOPXQ9BPY8 73 aaPredicted RBP4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 WDR83Q9BRX9 315 aaKnown RBP4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 TIMM29Q9BSF4 260 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 DPCDQ9BVM2 203 aaPredicted RBP4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 ANGPTL4Q9BY76 406 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 CHST5Q9GZS9 411 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 MED28Q9H204 178 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 SLC38A1Q9H2H9 487 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 SLCO5A1Q9H2Y9 848 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 EXO5Q9H790 373 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 PPP1R3EQ9H7J1 279 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 FKRPQ9H9S5 495 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 MYNNQ9NPC7 610 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 KRCC1Q9NPI7 259 aaPredicted RBP4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 PIGVQ9NUD9 493 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 TMEM45AQ9NWC5 275 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 VNN3Q9NY84 501 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 PAK5Q9P286 719 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 SMPXQ9UHP9 88 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 SLC13A4Q9UKG4 626 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 RPH3ALQ9UNE2 315 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 AURKCQ9UQB9 309 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 SLC35A3Q9Y2D2 325 aa4.84□□□□□ -1.63
ECHDC1-206ENST00000417628 NPIPB15A6NHN6 443 aaPredicted RBP4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 VSTM2BA6NLU5 285 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 GABRR3A8MPY1 467 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 HMSDA8MTL9 139 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 A8MWP6 167 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 MAGEB17A8MXT2 336 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 MYO1GB0I1T2 1018 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 SEC14L6B5MCN3 397 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 EEF1E1-BLOC1S5C9J1V9 151 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 INMT-MINDY4F8WBC2 141 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 FOXE1O00358 373 aaPredicted RBP4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 EEF1E1O43324 174 aaKnown RBP4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 PRAF2O60831 178 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms