RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 PLCXD1Q9NUJ7 323 aa7.36□□□□□ -1.23
TRIM48-201ENST00000417545 B3GNT2Q9NY97 397 aa7.36□□□□□ -1.23
TRIM48-201ENST00000417545 ZNF224Q9NZL3 707 aa7.36□□□□□ -1.23
TRIM48-201ENST00000417545 KCNN3Q9UGI6 736 aa7.36□□□□□ -1.23
TRIM48-201ENST00000417545 ATPIF1Q9UII2 106 aa7.36□□□□□ -1.23
TRIM48-201ENST00000417545 ERGIC3Q9Y282 383 aa7.36□□□□□ -1.23
TRIM48-201ENST00000417545 EXOGQ9Y2C4 368 aaKnown RBP7.36□□□□□ -1.23
TRIM48-201ENST00000417545 GRIP1Q9Y3R0 1128 aa7.36□□□□□ -1.23
TRIM48-201ENST00000417545 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.35□□□□□ -1.23
TRIM48-201ENST00000417545 A0A1W2PQL4 384 aaPredicted RBP7.35□□□□□ -1.23
TRIM48-201ENST00000417545 J3QLW9 94 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 M0R135 149 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 ZNF254O75437 659 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 RPP14O95059 124 aaKnown RBP7.35□□□□□ -1.23
TRIM48-201ENST00000417545 TNFAIP8O95379 198 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 CLDN1O95832 211 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 IGKV3-15P01624 115 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 LCATP04180 440 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 LCKP06239 509 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 THBDP07204 575 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 CCL2P13500 99 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 ZNF14P17017 642 aaPredicted RBP7.35□□□□□ -1.23
TRIM48-201ENST00000417545 ZNF19P17023 458 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 ALOX5APP20292 161 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 CD40P25942 277 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 RGS6P49758 472 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 GBX2P52951 348 aaPredicted RBP7.35□□□□□ -1.23
TRIM48-201ENST00000417545 GABARAPL2P60520 117 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 NAAAQ02083 359 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 MALLQ13021 153 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 GFOD2Q3B7J2 385 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 TP53I3Q53FA7 332 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 SP5Q6BEB4 398 aaPredicted RBP7.35□□□□□ -1.23
TRIM48-201ENST00000417545 ADAM5Q6NVV9 412 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 VHLLQ6RSH7 139 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 TMEM200AQ86VY9 491 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 ZNF679Q8IYX0 411 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 SVOPQ8N4V2 548 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 FAM169BQ8N8A8 192 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 ST7LQ8TDW4 575 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 FBLIM1Q8WUP2 373 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 RNF133Q8WVZ7 376 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 GGHQ92820 318 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 ZNF799Q96GE5 643 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 PGAM5Q96HS1 289 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 MAP6Q96JE9 813 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 OR8B4Q96RC9 309 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 DCLRE1CQ96SD1 692 aaKnown RBP7.35□□□□□ -1.23
TRIM48-201ENST00000417545 KCNJ15Q99712 375 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 SPOCK3Q9BQ16 436 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 VCX3AQ9NNX9 186 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 FGF20Q9NP95 211 aaPredicted RBP7.35□□□□□ -1.23
TRIM48-201ENST00000417545 NPAP1Q9NZP6 1156 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 CRNNQ9UBG3 495 aaPredicted RBP7.35□□□□□ -1.23
TRIM48-201ENST00000417545 PLEKHB1Q9UF11 243 aaPredicted RBP7.35□□□□□ -1.23
TRIM48-201ENST00000417545 PSORS1C1Q9UIG5 152 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 DIMT1Q9UNQ2 313 aaKnown RBP7.35□□□□□ -1.23
TRIM48-201ENST00000417545 COPS3Q9UNS2 423 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 KLHDC2Q9Y2U9 406 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 RNF115Q9Y4L5 304 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 LRRC42Q9Y546 428 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 LRP12Q9Y561 859 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 METTL15A6NJ78 407 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 ATP6V1G2-DDX39BF2Z307 99 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 LOC110117498-PIK3R3F6TDL0 507 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 SYNGR3O43761 229 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 GOSR1O95249 250 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 IGLV1-44P01699 117 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 MT-ND5P03915 603 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 CDK1P06493 297 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 HTR1AP08908 422 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 FAM157BP0CG42 384 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 PSKH1P11801 424 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 RAD52P43351 418 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 CHN2P52757 468 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 SELENOVP59797 346 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 HIST1H3AP68431 136 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 SNTB2Q13425 540 aaKnown RBP7.35□□□□□ -1.23
TRIM48-201ENST00000417545 GALEQ14376 348 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 PCK2Q16822 640 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 TIGD6Q17RP2 521 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 NCMAPQ5T1S8 102 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 BCL2L15Q5TBC7 163 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 HIST2H3PS2Q5TEC6 136 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 DEGS2Q6QHC5 323 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 DRAM2Q6UX65 266 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 HIST2H3AQ71DI3 136 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 KCTD20Q7Z5Y7 419 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 OR5L1Q8NGL2 311 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 ABHD4Q8TB40 342 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 SLC7A6Q92536 515 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 C4orf36Q96KX1 117 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 C4orf45Q96LM5 186 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 COG8Q96MW5 612 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 DOK1Q99704 481 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 RHNO1Q9BSD3 238 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 MND1Q9BWT6 205 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 YTHDF1Q9BYJ9 559 aaKnown RBP7.35□□□□□ -1.23
TRIM48-201ENST00000417545 ERVK13-1Q9NX77 482 aa7.35□□□□□ -1.23
TRIM48-201ENST00000417545 SLCO1C1Q9NYB5 712 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms