RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 ACOT8O14734 319 aa13.28□□□□□ -0.28
ITGB1-204ENST00000417122 HLA-DQA2P01906 255 aa13.28□□□□□ -0.28
ITGB1-204ENST00000417122 ADH4P08319 380 aa13.28□□□□□ -0.28
ITGB1-204ENST00000417122 RGS6P49758 472 aa13.28□□□□□ -0.28
ITGB1-204ENST00000417122 TRAP1Q12931 704 aaKnown RBP13.28□□□□□ -0.28
ITGB1-204ENST00000417122 HFEQ30201 348 aa13.28□□□□□ -0.28
ITGB1-204ENST00000417122 IL17RELQ6ZVW7 336 aa13.28□□□□□ -0.28
ITGB1-204ENST00000417122 OR8D4Q8NGM9 314 aa13.28□□□□□ -0.28
ITGB1-204ENST00000417122 PTP4A1Q93096 173 aa13.28□□□□□ -0.28
ITGB1-204ENST00000417122 CMBLQ96DG6 245 aa13.28□□□□□ -0.28
ITGB1-204ENST00000417122 MDFIQ99750 246 aa13.28□□□□□ -0.28
ITGB1-204ENST00000417122 COQ7Q99807 217 aa13.28□□□□□ -0.28
ITGB1-204ENST00000417122 CDADC1Q9BWV3 514 aa13.28□□□□□ -0.28
ITGB1-204ENST00000417122 DGCR6LQ9BY27 220 aa13.28□□□□□ -0.28
ITGB1-204ENST00000417122 EGLN1Q9GZT9 426 aa13.28□□□□□ -0.28
ITGB1-204ENST00000417122 TBC1D23Q9NUY8 699 aa13.28□□□□□ -0.28
ITGB1-204ENST00000417122 PURGQ9UJV8 347 aaKnown RBP13.28□□□□□ -0.28
ITGB1-204ENST00000417122 CACNG2Q9Y698 323 aa13.28□□□□□ -0.28
ITGB1-204ENST00000417122 CUBNO60494 3623 aa13.28□□□□□ -0.28
ITGB1-204ENST00000417122 B4DSR2 109 aa13.27□□□□□ -0.29
ITGB1-204ENST00000417122 CLDN25C9JDP6 229 aa13.27□□□□□ -0.29
ITGB1-204ENST00000417122 J3QW42 95 aa13.27□□□□□ -0.29
ITGB1-204ENST00000417122 UBOX5O94941 541 aa13.27□□□□□ -0.29
ITGB1-204ENST00000417122 HNF1AP20823 631 aa13.27□□□□□ -0.29
ITGB1-204ENST00000417122 KITLGP21583 273 aa13.27□□□□□ -0.29
ITGB1-204ENST00000417122 MVKQ03426 396 aa13.27□□□□□ -0.29
ITGB1-204ENST00000417122 CR1LQ2VPA4 569 aa13.27□□□□□ -0.29
ITGB1-204ENST00000417122 AVPI1Q5T686 147 aa13.27□□□□□ -0.29
ITGB1-204ENST00000417122 SLC18B1Q6NT16 456 aa13.27□□□□□ -0.29
ITGB1-204ENST00000417122 LINC00346Q8IVM7 164 aa13.27□□□□□ -0.29
ITGB1-204ENST00000417122 CYB561A3Q8NBI2 242 aa13.27□□□□□ -0.29
ITGB1-204ENST00000417122 OR5L1Q8NGL2 311 aa13.27□□□□□ -0.29
ITGB1-204ENST00000417122 OR2AJ1Q8NGZ0 328 aa13.27□□□□□ -0.29
ITGB1-204ENST00000417122 CCL17Q92583 94 aa13.27□□□□□ -0.29
ITGB1-204ENST00000417122 HAVCR1Q96D42 359 aa13.27□□□□□ -0.29
ITGB1-204ENST00000417122 DDOQ99489 341 aa13.27□□□□□ -0.29
ITGB1-204ENST00000417122 CHID1Q9BWS9 393 aa13.27□□□□□ -0.29
ITGB1-204ENST00000417122 TSSK6Q9BXA6 273 aa13.27□□□□□ -0.29
ITGB1-204ENST00000417122 TREM2Q9NZC2 230 aa13.27□□□□□ -0.29
ITGB1-204ENST00000417122 TANC2Q9HCD6 1990 aa13.27□□□□□ -0.29
ITGB1-204ENST00000417122 AQP12BA6NM10 295 aa13.26□□□□□ -0.29
ITGB1-204ENST00000417122 FAM157AC9JC47 383 aa13.26□□□□□ -0.29
ITGB1-204ENST00000417122 GYG2O15488 501 aa13.26□□□□□ -0.29
ITGB1-204ENST00000417122 SOX14O95416 240 aa13.26□□□□□ -0.29
ITGB1-204ENST00000417122 CST1P01037 141 aa13.26□□□□□ -0.29
ITGB1-204ENST00000417122 CD55P08174 381 aa13.26□□□□□ -0.29
ITGB1-204ENST00000417122 ZNF823P16415 610 aa13.26□□□□□ -0.29
ITGB1-204ENST00000417122 SRD5A1P18405 259 aa13.26□□□□□ -0.29
ITGB1-204ENST00000417122 PYCR1P32322 319 aa13.26□□□□□ -0.29
ITGB1-204ENST00000417122 GGT2P36268 569 aa13.26□□□□□ -0.29
ITGB1-204ENST00000417122 DVL1P1P54792 670 aaPredicted RBP13.26□□□□□ -0.29
ITGB1-204ENST00000417122 CDK5R2Q13319 367 aa13.26□□□□□ -0.29
ITGB1-204ENST00000417122 GK3PQ14409 553 aa13.26□□□□□ -0.29
ITGB1-204ENST00000417122 DNAL1Q4LDG9 190 aa13.26□□□□□ -0.29
ITGB1-204ENST00000417122 ZNF362Q5T0B9 420 aaPredicted RBP13.26□□□□□ -0.29
ITGB1-204ENST00000417122 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.26□□□□□ -0.291e-6■■□□□ 14.5
ITGB1-204ENST00000417122 CFAP77Q6ZQR2 320 aa13.26□□□□□ -0.29
ITGB1-204ENST00000417122 AQP12AQ8IXF9 295 aa13.26□□□□□ -0.29
ITGB1-204ENST00000417122 ADGRG5Q8IZF4 528 aa13.26□□□□□ -0.29
ITGB1-204ENST00000417122 LNX2Q8N448 690 aa13.26□□□□□ -0.29
ITGB1-204ENST00000417122 SLC37A3Q8NCC5 494 aa13.26□□□□□ -0.29
ITGB1-204ENST00000417122 PROKR2Q8NFJ6 384 aa13.26□□□□□ -0.29
ITGB1-204ENST00000417122 OR10G2Q8NGC3 310 aa13.26□□□□□ -0.29
ITGB1-204ENST00000417122 OR2T4Q8NH00 348 aa13.26□□□□□ -0.29
ITGB1-204ENST00000417122 CANT1Q8WVQ1 401 aa13.26□□□□□ -0.29
ITGB1-204ENST00000417122 APOBEC3DQ96AK3 386 aaPredicted RBP13.26□□□□□ -0.29
ITGB1-204ENST00000417122 TIMD4Q96H15 378 aa13.26□□□□□ -0.29
ITGB1-204ENST00000417122 PITX2Q99697 317 aa13.26□□□□□ -0.29
ITGB1-204ENST00000417122 MRPL22Q9NWU5 206 aaKnown RBP13.26□□□□□ -0.29
ITGB1-204ENST00000417122 PTTG3PQ9NZH4 202 aa13.26□□□□□ -0.29
ITGB1-204ENST00000417122 CYB5R1Q9UHQ9 305 aa13.26□□□□□ -0.29
ITGB1-204ENST00000417122 TMEFF2Q9UIK5 374 aaPredicted RBP13.26□□□□□ -0.29
ITGB1-204ENST00000417122 KCNG2Q9UJ96 466 aa13.26□□□□□ -0.29
ITGB1-204ENST00000417122 BAIAP2Q9UQB8 552 aa13.26□□□□□ -0.29
ITGB1-204ENST00000417122 WIPI2Q9Y4P8 454 aa13.26□□□□□ -0.29
ITGB1-204ENST00000417122 DHRS12A0PJE2 317 aa13.25□□□□□ -0.29
ITGB1-204ENST00000417122 F5H5K5 113 aa13.25□□□□□ -0.29
ITGB1-204ENST00000417122 RAC2P15153 192 aa13.25□□□□□ -0.29
ITGB1-204ENST00000417122 TNFSF4P23510 183 aa13.25□□□□□ -0.29
ITGB1-204ENST00000417122 ERFP50548 548 aa13.25□□□□□ -0.29
ITGB1-204ENST00000417122 LMO4P61968 165 aa13.25□□□□□ -0.29
ITGB1-204ENST00000417122 TNFAIP6P98066 277 aaPredicted RBP13.25□□□□□ -0.29
ITGB1-204ENST00000417122 SLC3A1Q07837 685 aa13.25□□□□□ -0.29
ITGB1-204ENST00000417122 HLXQ14774 488 aaPredicted RBP13.25□□□□□ -0.29
ITGB1-204ENST00000417122 RSPO1Q2MKA7 263 aaPredicted RBP13.25□□□□□ -0.29
ITGB1-204ENST00000417122 SPRNQ5BIV9 151 aa13.25□□□□□ -0.29
ITGB1-204ENST00000417122 FBXW12Q6X9E4 464 aa13.25□□□□□ -0.29
ITGB1-204ENST00000417122 Q6ZR03 302 aa13.25□□□□□ -0.29
ITGB1-204ENST00000417122 GLCCI1Q86VQ1 547 aa13.25□□□□□ -0.29
ITGB1-204ENST00000417122 OR2T33Q8NG76 320 aa13.25□□□□□ -0.29
ITGB1-204ENST00000417122 OR2Z1Q8NG97 314 aa13.25□□□□□ -0.29
ITGB1-204ENST00000417122 OR4Q3Q8NH05 313 aa13.25□□□□□ -0.29
ITGB1-204ENST00000417122 GIPC3Q8TF64 312 aa13.25□□□□□ -0.29
ITGB1-204ENST00000417122 RAB1CQ92928 201 aa13.25□□□□□ -0.29
ITGB1-204ENST00000417122 ATF6BQ99941 703 aa13.25□□□□□ -0.29
ITGB1-204ENST00000417122 NIPSNAP1Q9BPW8 284 aa13.25□□□□□ -0.29
ITGB1-204ENST00000417122 ARMC1Q9NVT9 282 aa13.25□□□□□ -0.29
ITGB1-204ENST00000417122 GNGT2O14610 69 aa13.24□□□□□ -0.29
ITGB1-204ENST00000417122 PCMT1P22061 227 aa13.24□□□□□ -0.29
ITGB1-204ENST00000417122 ECH1Q13011 328 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms