RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 LNX2Q8N448 690 aa10.95□□□□□ -0.66
LINC00339-202ENST00000416769 SLC22A24Q8N4F4 322 aa10.95□□□□□ -0.66
LINC00339-202ENST00000416769 SLC30A7Q8NEW0 376 aa10.95□□□□□ -0.66
LINC00339-202ENST00000416769 OR2T33Q8NG76 320 aa10.95□□□□□ -0.66
LINC00339-202ENST00000416769 OR8D4Q8NGM9 314 aa10.95□□□□□ -0.66
LINC00339-202ENST00000416769 LRR1Q96L50 414 aa10.95□□□□□ -0.66
LINC00339-202ENST00000416769 C1orf147Q96MC9 270 aaPredicted RBP10.95□□□□□ -0.66
LINC00339-202ENST00000416769 IFT27Q9BW83 186 aa10.95□□□□□ -0.66
LINC00339-202ENST00000416769 ZNF416Q9BWM5 594 aa10.95□□□□□ -0.66
LINC00339-202ENST00000416769 TBC1D23Q9NUY8 699 aa10.95□□□□□ -0.66
LINC00339-202ENST00000416769 TMEM38BQ9NVV0 291 aa10.95□□□□□ -0.66
LINC00339-202ENST00000416769 SMPD3Q9NY59 655 aaPredicted RBP10.95□□□□□ -0.66
LINC00339-202ENST00000416769 IER3IP1Q9Y5U9 82 aa10.95□□□□□ -0.66
LINC00339-202ENST00000416769 IGLV3-9A0A075B6K5 115 aa10.94□□□□□ -0.66
LINC00339-202ENST00000416769 ZNF726A6NNF4 738 aa10.94□□□□□ -0.66
LINC00339-202ENST00000416769 ZAR1LA6NP61 321 aa10.94□□□□□ -0.66
LINC00339-202ENST00000416769 CENPBD1B2RD01 187 aa10.94□□□□□ -0.66
LINC00339-202ENST00000416769 E9PQ18 207 aa10.94□□□□□ -0.66
LINC00339-202ENST00000416769 DLGAP1O14490 977 aa10.94□□□□□ -0.66
LINC00339-202ENST00000416769 BHLHE40O14503 412 aa10.94□□□□□ -0.66
LINC00339-202ENST00000416769 UBL3O95164 117 aa10.94□□□□□ -0.66
LINC00339-202ENST00000416769 SNAP29O95721 258 aa10.94□□□□□ -0.66
LINC00339-202ENST00000416769 HMGN1P05114 100 aa10.94□□□□□ -0.66
LINC00339-202ENST00000416769 LCKP06239 509 aa10.94□□□□□ -0.66
LINC00339-202ENST00000416769 ZFP36P26651 326 aaKnown RBP10.94□□□□□ -0.66
LINC00339-202ENST00000416769 POLR2IP36954 125 aaKnown RBP10.94□□□□□ -0.66
LINC00339-202ENST00000416769 MPV17P39210 176 aa10.94□□□□□ -0.66
LINC00339-202ENST00000416769 VHLP40337 213 aa10.94□□□□□ -0.66
LINC00339-202ENST00000416769 DAP3P51398 398 aaKnown RBP10.94□□□□□ -0.66
LINC00339-202ENST00000416769 RPS23P62266 143 aaKnown RBP10.94□□□□□ -0.66
LINC00339-202ENST00000416769 ERVK-25P63136 954 aa10.94□□□□□ -0.66
LINC00339-202ENST00000416769 LCN2P80188 198 aa10.94□□□□□ -0.66
LINC00339-202ENST00000416769 MRPS11P82912 194 aaKnown RBP10.94□□□□□ -0.66
LINC00339-202ENST00000416769 ZIK1Q3SY52 487 aaPredicted RBP10.94□□□□□ -0.66
LINC00339-202ENST00000416769 ARMC4Q5T2S8 1044 aa10.94□□□□□ -0.66
LINC00339-202ENST00000416769 FAM205BPQ63HN1 556 aa10.94□□□□□ -0.66
LINC00339-202ENST00000416769 SLC27A4Q6P1M0 643 aa10.94□□□□□ -0.66
LINC00339-202ENST00000416769 FAM122BQ7Z309 247 aa10.94□□□□□ -0.66
LINC00339-202ENST00000416769 HDDC2Q7Z4H3 204 aa10.94□□□□□ -0.66
LINC00339-202ENST00000416769 IGFN1Q86VF2 1251 aa10.94□□□□□ -0.66
LINC00339-202ENST00000416769 BCL6BQ8N143 479 aaPredicted RBP10.94□□□□□ -0.66
LINC00339-202ENST00000416769 SIGLECL1Q8N7X8 197 aa10.94□□□□□ -0.66
LINC00339-202ENST00000416769 OR6X1Q8NH79 312 aa10.94□□□□□ -0.66
LINC00339-202ENST00000416769 ZMYND19Q96E35 227 aaPredicted RBP10.94□□□□□ -0.66
LINC00339-202ENST00000416769 ERMAPQ96PL5 475 aaPredicted RBP10.94□□□□□ -0.66
LINC00339-202ENST00000416769 TEX12Q9BXU0 123 aa10.94□□□□□ -0.66
LINC00339-202ENST00000416769 TOR3AQ9H497 397 aa10.94□□□□□ -0.66
LINC00339-202ENST00000416769 RIBC2Q9H4K1 309 aa10.94□□□□□ -0.66
LINC00339-202ENST00000416769 SLC25A19Q9HC21 320 aa10.94□□□□□ -0.66
LINC00339-202ENST00000416769 B3GAT2Q9NPZ5 323 aa10.94□□□□□ -0.66
LINC00339-202ENST00000416769 GLTPQ9NZD2 209 aa10.94□□□□□ -0.66
LINC00339-202ENST00000416769 GRHPRQ9UBQ7 328 aa10.94□□□□□ -0.66
LINC00339-202ENST00000416769 IL20RAQ9UHF4 553 aa10.94□□□□□ -0.66
LINC00339-202ENST00000416769 PRKDCP78527 4128 aaKnown RBP10.93□□□□□ -0.66
LINC00339-202ENST00000416769 IGHV1-69-2A0A0G2JMI3 117 aa10.93□□□□□ -0.66
LINC00339-202ENST00000416769 A0A0G2JMP0 313 aa10.93□□□□□ -0.66
LINC00339-202ENST00000416769 A0A0X1KG70 313 aa10.93□□□□□ -0.66
LINC00339-202ENST00000416769 A6NIZ1 184 aa10.93□□□□□ -0.66
LINC00339-202ENST00000416769 SLC16A6O15403 523 aa10.93□□□□□ -0.66
LINC00339-202ENST00000416769 AHCYL1O43865 530 aa10.93□□□□□ -0.66
LINC00339-202ENST00000416769 PPP1R3DO95685 299 aa10.93□□□□□ -0.66
LINC00339-202ENST00000416769 OR8G3PP0DMU2 310 aa10.93□□□□□ -0.66
LINC00339-202ENST00000416769 ZNF250P15622 560 aa10.93□□□□□ -0.66
LINC00339-202ENST00000416769 ACADSP16219 412 aa10.93□□□□□ -0.66
LINC00339-202ENST00000416769 NOS3P29474 1203 aa10.93□□□□□ -0.66
LINC00339-202ENST00000416769 SDHAP31040 664 aa10.93□□□□□ -0.66
LINC00339-202ENST00000416769 GRK5P34947 590 aa10.93□□□□□ -0.66
LINC00339-202ENST00000416769 KLF3P57682 345 aaPredicted RBP10.93□□□□□ -0.66
LINC00339-202ENST00000416769 RAP1BP61224 184 aa10.93□□□□□ -0.66
LINC00339-202ENST00000416769 RAP1AP62834 184 aa10.93□□□□□ -0.66
LINC00339-202ENST00000416769 CLEC12AQ5QGZ9 265 aa10.93□□□□□ -0.66
LINC00339-202ENST00000416769 PRR31Q5SQ13 230 aa10.93□□□□□ -0.66
LINC00339-202ENST00000416769 DCAF12L2Q5VW00 463 aa10.93□□□□□ -0.66
LINC00339-202ENST00000416769 SLX4IPQ5VYV7 408 aa10.93□□□□□ -0.66
LINC00339-202ENST00000416769 ZNF101Q8IZC7 436 aa10.93□□□□□ -0.66
LINC00339-202ENST00000416769 BPIFB2Q8N4F0 458 aa10.93□□□□□ -0.66
LINC00339-202ENST00000416769 CPEB3Q8NE35 698 aaKnown RBP10.93□□□□□ -0.66
LINC00339-202ENST00000416769 OR4M2Q8NGB6 313 aa10.93□□□□□ -0.66
LINC00339-202ENST00000416769 OR4Q3Q8NH05 313 aa10.93□□□□□ -0.66
LINC00339-202ENST00000416769 ZNF519Q8TB69 540 aa10.93□□□□□ -0.66
LINC00339-202ENST00000416769 SYNPRQ8TBG9 265 aa10.93□□□□□ -0.66
LINC00339-202ENST00000416769 ASB10Q8WXI3 467 aa10.93□□□□□ -0.66
LINC00339-202ENST00000416769 DVL3Q92997 716 aaPredicted RBP10.93□□□□□ -0.66
LINC00339-202ENST00000416769 SLC25A44Q96H78 314 aaPredicted RBP10.93□□□□□ -0.66
LINC00339-202ENST00000416769 HRASLS5Q96KN8 279 aa10.93□□□□□ -0.66
LINC00339-202ENST00000416769 Q96M85 177 aa10.93□□□□□ -0.66
LINC00339-202ENST00000416769 ZNF48Q96MX3 618 aaPredicted RBP10.93□□□□□ -0.66
LINC00339-202ENST00000416769 ZNF570Q96NI8 536 aa10.93□□□□□ -0.66
LINC00339-202ENST00000416769 MBOAT4Q96T53 435 aa10.93□□□□□ -0.66
LINC00339-202ENST00000416769 MMP26Q9NRE1 261 aa10.93□□□□□ -0.66
LINC00339-202ENST00000416769 FAM118AQ9NWS6 357 aa10.93□□□□□ -0.66
LINC00339-202ENST00000416769 ADAM18Q9Y3Q7 739 aa10.93□□□□□ -0.66
LINC00339-202ENST00000416769 TANC2Q9HCD6 1990 aa10.93□□□□□ -0.66
LINC00339-202ENST00000416769 CMYA5Q8N3K9 4069 aa10.92□□□□□ -0.66
LINC00339-202ENST00000416769 LOC100130705A0A1B0GUX0 176 aa10.92□□□□□ -0.66
LINC00339-202ENST00000416769 ZSCAN5BA6NJL1 495 aa10.92□□□□□ -0.66
LINC00339-202ENST00000416769 DHHO43323 396 aa10.92□□□□□ -0.66
LINC00339-202ENST00000416769 SPRY3O43610 288 aa10.92□□□□□ -0.66
LINC00339-202ENST00000416769 TRMUO75648 421 aaKnown RBP10.92□□□□□ -0.66
LINC00339-202ENST00000416769 IGHV1-46P01743 117 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms