RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 IGLON5A6NGN9 336 aa13.25□□□□□ -0.29
NCKIPSD-204ENST00000416649 ZNF860A6NHJ4 632 aa13.25□□□□□ -0.29
NCKIPSD-204ENST00000416649 C1QTNF3-AMACRE9PGA6 284 aa13.25□□□□□ -0.29
NCKIPSD-204ENST00000416649 SLC31A2O15432 143 aa13.25□□□□□ -0.29
NCKIPSD-204ENST00000416649 PRNPP04156 253 aa13.25□□□□□ -0.29
NCKIPSD-204ENST00000416649 CD5P06127 495 aa13.25□□□□□ -0.29
NCKIPSD-204ENST00000416649 SLC35G4P0C7Q5 338 aa13.25□□□□□ -0.29
NCKIPSD-204ENST00000416649 FCARP24071 287 aa13.25□□□□□ -0.29
NCKIPSD-204ENST00000416649 SULT1A1P50225 295 aa13.25□□□□□ -0.29
NCKIPSD-204ENST00000416649 DVL1P1P54792 670 aaPredicted RBP13.25□□□□□ -0.29
NCKIPSD-204ENST00000416649 PRDX1Q06830 199 aaKnown RBP13.25□□□□□ -0.29
NCKIPSD-204ENST00000416649 ZNF616Q08AN1 781 aa13.25□□□□□ -0.29
NCKIPSD-204ENST00000416649 HYAL1Q12794 435 aa13.25□□□□□ -0.29
NCKIPSD-204ENST00000416649 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.25□□□□□ -0.29
NCKIPSD-204ENST00000416649 ADAMTS17Q8TE56 1095 aa13.25□□□□□ -0.29
NCKIPSD-204ENST00000416649 CMBLQ96DG6 245 aa13.25□□□□□ -0.29
NCKIPSD-204ENST00000416649 PCBD2Q9H0N5 130 aa13.25□□□□□ -0.29
NCKIPSD-204ENST00000416649 SEC16AO15027 2179 aa13.24□□□□□ -0.29
NCKIPSD-204ENST00000416649 TRBV5-5A0A0J9YX44 114 aa13.24□□□□□ -0.29
NCKIPSD-204ENST00000416649 OR4C45A6NMZ5 311 aa13.24□□□□□ -0.29
NCKIPSD-204ENST00000416649 GLCEO94923 617 aa13.24□□□□□ -0.29
NCKIPSD-204ENST00000416649 AGR2O95994 175 aa13.24□□□□□ -0.29
NCKIPSD-204ENST00000416649 PI3P19957 117 aa13.24□□□□□ -0.29
NCKIPSD-204ENST00000416649 GABRA3P34903 492 aa13.24□□□□□ -0.29
NCKIPSD-204ENST00000416649 RBP2P50120 134 aa13.24□□□□□ -0.29
NCKIPSD-204ENST00000416649 EXOSC7Q15024 291 aaKnown RBP13.24□□□□□ -0.29
NCKIPSD-204ENST00000416649 PPP4R1LQ9P1A2 415 aa13.24□□□□□ -0.29
NCKIPSD-204ENST00000416649 APOBEC3BQ9UH17 382 aaKnown RBP13.24□□□□□ -0.29
NCKIPSD-204ENST00000416649 KCNK6Q9Y257 313 aa13.24□□□□□ -0.29
NCKIPSD-204ENST00000416649 TIMM10BQ9Y5J6 103 aa13.24□□□□□ -0.29
NCKIPSD-204ENST00000416649 A0A0B4J2E0 115 aa13.24□□□□□ -0.29
NCKIPSD-204ENST00000416649 A0A1B0GX12 115 aa13.24□□□□□ -0.29
NCKIPSD-204ENST00000416649 A0A1W2PP55 124 aa13.24□□□□□ -0.29
NCKIPSD-204ENST00000416649 BTBD17A6NE02 478 aa13.24□□□□□ -0.29
NCKIPSD-204ENST00000416649 OR10H2O60403 315 aa13.24□□□□□ -0.29
NCKIPSD-204ENST00000416649 IFNA6P05013 189 aa13.24□□□□□ -0.29
NCKIPSD-204ENST00000416649 MELTFP08582 738 aa13.24□□□□□ -0.29
NCKIPSD-204ENST00000416649 FCGR3AP08637 254 aa13.24□□□□□ -0.29
NCKIPSD-204ENST00000416649 CSRP1P21291 193 aaKnown RBP13.24□□□□□ -0.29
NCKIPSD-204ENST00000416649 PAX6P26367 422 aa13.24□□□□□ -0.29
NCKIPSD-204ENST00000416649 CDKN2AP42771 156 aaKnown RBP13.24□□□□□ -0.29
NCKIPSD-204ENST00000416649 PMPCAQ10713 525 aa13.24□□□□□ -0.29
NCKIPSD-204ENST00000416649 GAMTQ14353 236 aa13.24□□□□□ -0.29
NCKIPSD-204ENST00000416649 ELAVL3Q14576 367 aaKnown RBP13.24□□□□□ -0.29
NCKIPSD-204ENST00000416649 RSU1Q15404 277 aa13.24□□□□□ -0.29
NCKIPSD-204ENST00000416649 OR2A2Q6IF42 318 aa13.24□□□□□ -0.29
NCKIPSD-204ENST00000416649 UBAC2Q8NBM4 344 aa13.24□□□□□ -0.29
NCKIPSD-204ENST00000416649 SMIM8Q96KF7 97 aa13.24□□□□□ -0.29
NCKIPSD-204ENST00000416649 PRRT1Q99946 306 aa13.24□□□□□ -0.29
NCKIPSD-204ENST00000416649 TEX101Q9BY14 249 aa13.24□□□□□ -0.29
NCKIPSD-204ENST00000416649 SLC22A13Q9Y226 551 aa13.24□□□□□ -0.29
NCKIPSD-204ENST00000416649 ENTPD2Q9Y5L3 495 aa13.24□□□□□ -0.29
NCKIPSD-204ENST00000416649 TICRRQ7Z2Z1 1910 aa13.23□□□□□ -0.29
NCKIPSD-204ENST00000416649 SLC17A2O00624 439 aa13.23□□□□□ -0.29
NCKIPSD-204ENST00000416649 NME2P1O60361 137 aa13.23□□□□□ -0.29
NCKIPSD-204ENST00000416649 TMEM127O75204 238 aa13.23□□□□□ -0.29
NCKIPSD-204ENST00000416649 TSPAN15O95858 294 aa13.23□□□□□ -0.29
NCKIPSD-204ENST00000416649 P2RY2P41231 377 aa13.23□□□□□ -0.29
NCKIPSD-204ENST00000416649 ACTR1BP42025 376 aa13.23□□□□□ -0.29
NCKIPSD-204ENST00000416649 CHAF1BQ13112 559 aa13.23□□□□□ -0.29
NCKIPSD-204ENST00000416649 PDGFRLQ15198 375 aa13.23□□□□□ -0.29
NCKIPSD-204ENST00000416649 SURF2Q15527 256 aaPredicted RBP13.23□□□□□ -0.29
NCKIPSD-204ENST00000416649 ALG11Q2TAA5 492 aa13.23□□□□□ -0.29
NCKIPSD-204ENST00000416649 NSUN5P2Q63ZY6 315 aa13.23□□□□□ -0.29
NCKIPSD-204ENST00000416649 OR5T3Q8NGG3 340 aa13.23□□□□□ -0.29
NCKIPSD-204ENST00000416649 OR2A1Q8NGT9 310 aa13.23□□□□□ -0.29
NCKIPSD-204ENST00000416649 MARCH1Q8TCQ1 289 aa13.23□□□□□ -0.29
NCKIPSD-204ENST00000416649 ASB17Q8WXJ9 295 aa13.23□□□□□ -0.29
NCKIPSD-204ENST00000416649 SLC39A7Q92504 469 aa13.23□□□□□ -0.29
NCKIPSD-204ENST00000416649 SAT2Q96F10 170 aaPredicted RBP13.23□□□□□ -0.29
NCKIPSD-204ENST00000416649 ZNF426Q9BUY5 554 aa13.23□□□□□ -0.29
NCKIPSD-204ENST00000416649 SLC17A9Q9BYT1 436 aa13.23□□□□□ -0.29
NCKIPSD-204ENST00000416649 LMAN2LQ9H0V9 348 aa13.23□□□□□ -0.29
NCKIPSD-204ENST00000416649 PLXNA2O75051 1894 aa13.23□□□□□ -0.29
NCKIPSD-204ENST00000416649 A0A087X0M5 115 aa13.23□□□□□ -0.29
NCKIPSD-204ENST00000416649 A0A1B0GX30 115 aa13.23□□□□□ -0.29
NCKIPSD-204ENST00000416649 MED19A0JLT2 244 aaPredicted RBP13.23□□□□□ -0.29
NCKIPSD-204ENST00000416649 GMFGO60234 142 aa13.23□□□□□ -0.29
NCKIPSD-204ENST00000416649 DNAJB6O75190 326 aa13.23□□□□□ -0.29
NCKIPSD-204ENST00000416649 HRH1P35367 487 aa13.23□□□□□ -0.29
NCKIPSD-204ENST00000416649 EMDP50402 254 aa13.23□□□□□ -0.29
NCKIPSD-204ENST00000416649 DBX2Q6ZNG2 339 aa13.23□□□□□ -0.29
NCKIPSD-204ENST00000416649 ZNF514Q96K75 400 aaPredicted RBP13.23□□□□□ -0.29
NCKIPSD-204ENST00000416649 JSRP1Q96MG2 331 aaPredicted RBP13.23□□□□□ -0.29
NCKIPSD-204ENST00000416649 METTL8Q9H825 291 aaKnown RBP13.23□□□□□ -0.29
NCKIPSD-204ENST00000416649 MKKSQ9NPJ1 570 aaPredicted RBP13.23□□□□□ -0.29
NCKIPSD-204ENST00000416649 EDDM13A0A1B0GTR0 161 aa13.23□□□□□ -0.29
NCKIPSD-204ENST00000416649 IFITM10A6NMD0 228 aa13.23□□□□□ -0.29
NCKIPSD-204ENST00000416649 HOXC4P09017 264 aaPredicted RBP13.23□□□□□ -0.29
NCKIPSD-204ENST00000416649 TSFMP43897 325 aaKnown RBP13.23□□□□□ -0.29
NCKIPSD-204ENST00000416649 TAS2R60P59551 318 aa13.23□□□□□ -0.29
NCKIPSD-204ENST00000416649 PLAURQ03405 335 aa13.23□□□□□ -0.29
NCKIPSD-204ENST00000416649 ARHGAP19Q14CB8 494 aa13.23□□□□□ -0.29
NCKIPSD-204ENST00000416649 LINC01590Q5TEZ4 76 aa13.23□□□□□ -0.29
NCKIPSD-204ENST00000416649 EIF5AL1Q6IS14 154 aaKnown RBP13.23□□□□□ -0.29
NCKIPSD-204ENST00000416649 SLC35D2Q76EJ3 337 aa13.23□□□□□ -0.29
NCKIPSD-204ENST00000416649 TRAPPC6BQ86SZ2 158 aa13.23□□□□□ -0.29
NCKIPSD-204ENST00000416649 FAM46BQ96A09 425 aa13.23□□□□□ -0.29
NCKIPSD-204ENST00000416649 SLC41A2Q96JW4 573 aa13.23□□□□□ -0.29
NCKIPSD-204ENST00000416649 WDR76Q9H967 626 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms