RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 MARS2Q96GW9 593 aaKnown RBP15.44■□□□□ 0.06
SEMA3B-201ENST00000416295 COX4I2Q96KJ9 171 aa15.44■□□□□ 0.06
SEMA3B-201ENST00000416295 ATF6BQ99941 703 aa15.44■□□□□ 0.06
SEMA3B-201ENST00000416295 RHNO1Q9BSD3 238 aa15.44■□□□□ 0.06
SEMA3B-201ENST00000416295 OR2J1Q9GZK6 312 aa15.44■□□□□ 0.06
SEMA3B-201ENST00000416295 MED20Q9H944 212 aa15.44■□□□□ 0.06
SEMA3B-201ENST00000416295 TAAR3PQ9P1P4 343 aa15.44■□□□□ 0.06
SEMA3B-201ENST00000416295 MYEF2Q9P2K5 600 aaKnown RBP15.44■□□□□ 0.06
SEMA3B-201ENST00000416295 PRODHO43272 600 aa15.43■□□□□ 0.06
SEMA3B-201ENST00000416295 GLCEO94923 617 aa15.43■□□□□ 0.06
SEMA3B-201ENST00000416295 CLPTM1O96005 669 aa15.43■□□□□ 0.06
SEMA3B-201ENST00000416295 NGFP01138 241 aa15.43■□□□□ 0.06
SEMA3B-201ENST00000416295 INHBBP09529 407 aa15.43■□□□□ 0.06
SEMA3B-201ENST00000416295 IGFBP5P24593 272 aa15.43■□□□□ 0.06
SEMA3B-201ENST00000416295 MAD2L1BPQ15013 274 aaPredicted RBP15.43■□□□□ 0.06
SEMA3B-201ENST00000416295 PTGES3Q15185 160 aaKnown RBP15.43■□□□□ 0.06
SEMA3B-201ENST00000416295 SNAPC1Q16533 368 aa15.43■□□□□ 0.06
SEMA3B-201ENST00000416295 PCK2Q16822 640 aa15.43■□□□□ 0.06
SEMA3B-201ENST00000416295 TEX30Q5JUR7 227 aa15.43■□□□□ 0.06
SEMA3B-201ENST00000416295 LINC01590Q5TEZ4 76 aa15.43■□□□□ 0.06
SEMA3B-201ENST00000416295 TMEM154Q6P9G4 183 aa15.43■□□□□ 0.06
SEMA3B-201ENST00000416295 LYPD4Q6UWN0 246 aa15.43■□□□□ 0.06
SEMA3B-201ENST00000416295 ZNF511Q8NB15 262 aa15.43■□□□□ 0.06
SEMA3B-201ENST00000416295 KLF14Q8TD94 323 aaPredicted RBP15.43■□□□□ 0.06
SEMA3B-201ENST00000416295 SLC7A6Q92536 515 aa15.43■□□□□ 0.06
SEMA3B-201ENST00000416295 FAM168AQ92567 244 aa15.43■□□□□ 0.06
SEMA3B-201ENST00000416295 PTP4A1Q93096 173 aa15.43■□□□□ 0.06
SEMA3B-201ENST00000416295 PKP2Q99959 881 aa15.43■□□□□ 0.06
SEMA3B-201ENST00000416295 HCAR1Q9BXC0 346 aa15.43■□□□□ 0.06
SEMA3B-201ENST00000416295 OR51V1Q9H2C8 321 aa15.43■□□□□ 0.06
SEMA3B-201ENST00000416295 WDR76Q9H967 626 aa15.43■□□□□ 0.06
SEMA3B-201ENST00000416295 NAV3Q8IVL0 2385 aa15.42■□□□□ 0.06
SEMA3B-201ENST00000416295 ARFGEF3Q5TH69 2177 aa15.42■□□□□ 0.06
SEMA3B-201ENST00000416295 SAC3D1A6NKF1 404 aa15.42■□□□□ 0.06
SEMA3B-201ENST00000416295 MITFO75030 526 aaPredicted RBP15.42■□□□□ 0.06
SEMA3B-201ENST00000416295 LY6HO94772 140 aa15.42■□□□□ 0.06
SEMA3B-201ENST00000416295 DBHP09172 617 aa15.42■□□□□ 0.06
SEMA3B-201ENST00000416295 SPARCP09486 303 aa15.42■□□□□ 0.06
SEMA3B-201ENST00000416295 GSTT1P30711 240 aa15.42■□□□□ 0.06
SEMA3B-201ENST00000416295 PDLIM4P50479 330 aa15.42■□□□□ 0.06
SEMA3B-201ENST00000416295 CPOQ8IVL8 374 aa15.42■□□□□ 0.06
SEMA3B-201ENST00000416295 ZCCHC24Q8N2G6 241 aaKnown RBP15.42■□□□□ 0.06
SEMA3B-201ENST00000416295 OR5L1Q8NGL2 311 aa15.42■□□□□ 0.06
SEMA3B-201ENST00000416295 MAP6Q96JE9 813 aa15.42■□□□□ 0.06
SEMA3B-201ENST00000416295 INTS14Q96SY0 518 aa15.42■□□□□ 0.06
SEMA3B-201ENST00000416295 CIB1Q99828 191 aa15.42■□□□□ 0.06
SEMA3B-201ENST00000416295 RBM4BQ9BQ04 359 aaKnown RBP15.42■□□□□ 0.06
SEMA3B-201ENST00000416295 TPK1Q9H3S4 243 aa15.42■□□□□ 0.06
SEMA3B-201ENST00000416295 PNRC2Q9NPJ4 139 aaKnown RBP15.42■□□□□ 0.06
SEMA3B-201ENST00000416295 HINT3Q9NQE9 182 aaKnown RBP15.42■□□□□ 0.06
SEMA3B-201ENST00000416295 TVP23BQ9NYZ1 205 aa15.42■□□□□ 0.06
SEMA3B-201ENST00000416295 CGGBP1Q9UFW8 167 aaPredicted RBP15.42■□□□□ 0.06
SEMA3B-201ENST00000416295 NDUFS8O00217 210 aa15.41■□□□□ 0.06
SEMA3B-201ENST00000416295 ZNF593O00488 134 aaPredicted RBP15.41■□□□□ 0.06
SEMA3B-201ENST00000416295 NAT2P11245 290 aa15.41■□□□□ 0.06
SEMA3B-201ENST00000416295 SLC25A16P16260 332 aa15.41■□□□□ 0.06
SEMA3B-201ENST00000416295 MPV17P39210 176 aa15.41■□□□□ 0.06
SEMA3B-201ENST00000416295 RPS27P42677 84 aaKnown RBP15.41■□□□□ 0.06
SEMA3B-201ENST00000416295 PPP2R2BQ00005 443 aa15.41■□□□□ 0.06
SEMA3B-201ENST00000416295 PCGF3Q3KNV8 242 aa15.41■□□□□ 0.06
SEMA3B-201ENST00000416295 KRTAP27-1Q3LI81 207 aa15.41■□□□□ 0.06
SEMA3B-201ENST00000416295 KLHL12Q53G59 568 aa15.41■□□□□ 0.06
SEMA3B-201ENST00000416295 SLC35D3Q5M8T2 416 aa15.41■□□□□ 0.06
SEMA3B-201ENST00000416295 CXXC5Q7LFL8 322 aaKnown RBP15.41■□□□□ 0.06
SEMA3B-201ENST00000416295 DCXRQ7Z4W1 244 aa15.41■□□□□ 0.06
SEMA3B-201ENST00000416295 CIARTQ8N365 385 aaPredicted RBP15.41■□□□□ 0.06
SEMA3B-201ENST00000416295 SPTSSAQ969W0 71 aa15.41■□□□□ 0.06
SEMA3B-201ENST00000416295 APOBEC3DQ96AK3 386 aaPredicted RBP15.41■□□□□ 0.06
SEMA3B-201ENST00000416295 REG4Q9BYZ8 158 aa15.41■□□□□ 0.06
SEMA3B-201ENST00000416295 GSX1Q9H4S2 264 aaPredicted RBP15.41■□□□□ 0.06
SEMA3B-201ENST00000416295 MARCH7Q9H992 704 aa15.41■□□□□ 0.06
SEMA3B-201ENST00000416295 DDX28Q9NUL7 540 aaKnown RBP15.41■□□□□ 0.06
SEMA3B-201ENST00000416295 TMEFF2Q9UIK5 374 aaPredicted RBP15.41■□□□□ 0.06
SEMA3B-201ENST00000416295 IGHV4-30-2A0A087WSY4 118 aa15.4■□□□□ 0.06
SEMA3B-201ENST00000416295 LOC390937A0A1W2PQ73 354 aa15.4■□□□□ 0.06
SEMA3B-201ENST00000416295 PLSCR5A0PG75 271 aa15.4■□□□□ 0.06
SEMA3B-201ENST00000416295 ZAR1LA6NP61 321 aa15.4■□□□□ 0.06
SEMA3B-201ENST00000416295 RNF223E7ERA6 249 aa15.4■□□□□ 0.06
SEMA3B-201ENST00000416295 F5H5K5 113 aa15.4■□□□□ 0.06
SEMA3B-201ENST00000416295 DAOP14920 347 aa15.4■□□□□ 0.06
SEMA3B-201ENST00000416295 LIPAP38571 399 aa15.4■□□□□ 0.06
SEMA3B-201ENST00000416295 TPTEP56180 551 aa15.4■□□□□ 0.06
SEMA3B-201ENST00000416295 ALKBH6Q3KRA9 238 aa15.4■□□□□ 0.06
SEMA3B-201ENST00000416295 ZMAT1Q5H9K5 638 aa15.4■□□□□ 0.06
SEMA3B-201ENST00000416295 SLX4IPQ5VYV7 408 aa15.4■□□□□ 0.06
SEMA3B-201ENST00000416295 SHFQ7M4L6 423 aa15.4■□□□□ 0.06
SEMA3B-201ENST00000416295 ERI1Q8IV48 349 aaKnown RBP15.4■□□□□ 0.06
SEMA3B-201ENST00000416295 OR6N2Q8NGY6 317 aa15.4■□□□□ 0.06
SEMA3B-201ENST00000416295 C10orf105Q8TEF2 133 aa15.4■□□□□ 0.06
SEMA3B-201ENST00000416295 S100A14Q9HCY8 104 aa15.4■□□□□ 0.06
SEMA3B-201ENST00000416295 CYSLTR2Q9NS75 346 aa15.4■□□□□ 0.06
SEMA3B-201ENST00000416295 ORC6Q9Y5N6 252 aa15.4■□□□□ 0.06
SEMA3B-201ENST00000416295 VPS13CQ709C8 3753 aa15.39■□□□□ 0.05
SEMA3B-201ENST00000416295 C17orf100A8MU93 164 aa15.39■□□□□ 0.05
SEMA3B-201ENST00000416295 ZNF878C9JN71 531 aa15.39■□□□□ 0.05
SEMA3B-201ENST00000416295 SMAD7O15105 426 aaKnown RBP15.39■□□□□ 0.05
SEMA3B-201ENST00000416295 ACSM4P0C7M7 580 aa15.39■□□□□ 0.05
SEMA3B-201ENST00000416295 PSKH1P11801 424 aa15.39■□□□□ 0.05
SEMA3B-201ENST00000416295 HOXB4P17483 251 aaPredicted RBP15.39■□□□□ 0.05
SEMA3B-201ENST00000416295 RPS7P62081 194 aaKnown RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms