RNA–Protein interactions for RNA: ENST00000415046.6

PTPRK-209, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 1,029 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-209ENST00000415046 SNTB1Q13884 538 aaKnown RBP3.82□□□□□ -1.8
PTPRK-209ENST00000415046 VEZF1Q14119 521 aa3.82□□□□□ -1.8
PTPRK-209ENST00000415046 OR1Q1Q15612 314 aa3.82□□□□□ -1.8
PTPRK-209ENST00000415046 NPTX1Q15818 432 aa3.82□□□□□ -1.8
PTPRK-209ENST00000415046 BCL2A1Q16548 175 aa3.82□□□□□ -1.8
PTPRK-209ENST00000415046 ZNF239Q16600 458 aaKnown RBP3.82□□□□□ -1.8
PTPRK-209ENST00000415046 NRF1Q16656 503 aa3.82□□□□□ -1.8
PTPRK-209ENST00000415046 DUSP7Q16829 419 aa3.82□□□□□ -1.8
PTPRK-209ENST00000415046 CTU2Q2VPK5 515 aaKnown RBP3.82□□□□□ -1.8
PTPRK-209ENST00000415046 SYT14P1Q58G82 188 aa3.82□□□□□ -1.8
PTPRK-209ENST00000415046 SLC25A53Q5H9E4 307 aa3.82□□□□□ -1.8
PTPRK-209ENST00000415046 RIPPLY2Q5TAB7 128 aa3.82□□□□□ -1.8
PTPRK-209ENST00000415046 CCDC80Q76M96 950 aa3.82□□□□□ -1.8
PTPRK-209ENST00000415046 TRPM8Q7Z2W7 1104 aa3.82□□□□□ -1.8
PTPRK-209ENST00000415046 SLC46A3Q7Z3Q1 461 aa3.82□□□□□ -1.8
PTPRK-209ENST00000415046 VTCN1Q7Z7D3 282 aa3.82□□□□□ -1.8
PTPRK-209ENST00000415046 LUZP2Q86TE4 346 aa3.82□□□□□ -1.8
PTPRK-209ENST00000415046 NFE4Q86UQ8 179 aa3.82□□□□□ -1.8
PTPRK-209ENST00000415046 CARM1Q86X55 608 aa3.82□□□□□ -1.8
PTPRK-209ENST00000415046 EPHX4Q8IUS5 362 aa3.82□□□□□ -1.8
PTPRK-209ENST00000415046 C10orf53Q8N6V4 93 aa3.82□□□□□ -1.8
PTPRK-209ENST00000415046 RELL2Q8NC24 303 aaPredicted RBP3.82□□□□□ -1.8
PTPRK-209ENST00000415046 OR4D11Q8NGI4 311 aa3.82□□□□□ -1.8
PTPRK-209ENST00000415046 ZPLD1Q8TCW7 415 aa3.82□□□□□ -1.8
PTPRK-209ENST00000415046 OSTF1Q92882 214 aa3.82□□□□□ -1.8
PTPRK-209ENST00000415046 SLC25A36Q96CQ1 311 aa3.82□□□□□ -1.8
PTPRK-209ENST00000415046 DDIT4LQ96D03 193 aa3.82□□□□□ -1.8
PTPRK-209ENST00000415046 ARL5BQ96KC2 179 aa3.82□□□□□ -1.8
PTPRK-209ENST00000415046 CDRT15Q96T59 188 aa3.82□□□□□ -1.8
PTPRK-209ENST00000415046 ARHGDIGQ99819 225 aa3.82□□□□□ -1.8
PTPRK-209ENST00000415046 HOPXQ9BPY8 73 aaPredicted RBP3.82□□□□□ -1.8
PTPRK-209ENST00000415046 ZNF559Q9BR84 538 aa3.82□□□□□ -1.8
PTPRK-209ENST00000415046 ZNF696Q9H7X3 374 aa3.82□□□□□ -1.8
PTPRK-209ENST00000415046 CALHM2Q9HA72 323 aa3.82□□□□□ -1.8
PTPRK-209ENST00000415046 C20orf141Q9NUB4 165 aa3.82□□□□□ -1.8
PTPRK-209ENST00000415046 ADPRHL2Q9NX46 363 aa3.82□□□□□ -1.8
PTPRK-209ENST00000415046 C6orf203Q9P0P8 240 aaPredicted RBP3.82□□□□□ -1.8
PTPRK-209ENST00000415046 CHRNA9Q9UGM1 479 aa3.82□□□□□ -1.8
PTPRK-209ENST00000415046 MCTS1Q9ULC4 181 aaKnown RBP3.82□□□□□ -1.8
PTPRK-209ENST00000415046 SLC9A8Q9Y2E8 581 aa3.82□□□□□ -1.8
PTPRK-209ENST00000415046 SPIN1Q9Y657 262 aaPredicted RBP3.82□□□□□ -1.8
PTPRK-209ENST00000415046 RAI1Q7Z5J4 1906 aaPredicted RBP3.82□□□□□ -1.8
PTPRK-209ENST00000415046 FBN2P35556 2912 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 MED13LQ71F56 2210 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 A0A1W2PNV4 684 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 GJE1A6NN92 205 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 C19orf84I3L1E1 186 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 hCG_2039718K7EN88 272 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 IFNL4K9M1U5 179 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 FAAHO00519 579 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 UBE2CO00762 179 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 SMAD9O15198 467 aaKnown RBP3.81□□□□□ -1.8
PTPRK-209ENST00000415046 ADAMDEC1O15204 470 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 RAMP1O60894 148 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 AKR7A3O95154 331 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 AHSA1O95433 338 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 GGT1P19440 569 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 ATP6V1B2P21281 511 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 CALB2P22676 271 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 GTF2E2P29084 291 aaKnown RBP3.81□□□□□ -1.8
PTPRK-209ENST00000415046 CEACAM8P31997 349 aaPredicted RBP3.81□□□□□ -1.8
PTPRK-209ENST00000415046 RPS5P46782 204 aaKnown RBP3.81□□□□□ -1.8
PTPRK-209ENST00000415046 ERFP50548 548 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 ASCL1P50553 236 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 MNAT1P51948 309 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 PPP5CP53041 499 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 TAS2R41P59536 307 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 SEC61BP60468 96 aaKnown RBP3.81□□□□□ -1.8
PTPRK-209ENST00000415046 ERVK11-1P61568 191 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 CSNK2A1P68400 391 aaPredicted RBP3.81□□□□□ -1.8
PTPRK-209ENST00000415046 CBX1P83916 185 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 RASGEF1BQ0VAM2 473 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 CEACAM7Q14002 265 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 OR7A5Q15622 319 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 ZSWIM7Q19AV6 140 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 EXOC3L2Q2M3D2 409 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 SLC25A35Q3KQZ1 300 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 SAMD4BQ5PRF9 694 aaKnown RBP3.81□□□□□ -1.8
PTPRK-209ENST00000415046 C1orf140Q5VVS0 124 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 AP1ARQ63HQ0 302 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 GLYATQ6IB77 296 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 OR2A2Q6IF42 318 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 TMEM154Q6P9G4 183 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 ULK3Q6PHR2 472 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 XKRXQ6PP77 449 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 FCRLAQ7L513 359 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 MEX3DQ86XN8 651 aaKnown RBP3.81□□□□□ -1.8
PTPRK-209ENST00000415046 LINC00346Q8IVM7 164 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 FOXRED2Q8IWF2 684 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 ODF3L1Q8IXM7 274 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 PGAM4Q8N0Y7 254 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 FAM86B1Q8N7N1 296 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 TMEM99Q8N816 258 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 POC5Q8NA72 575 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 SCCPDHQ8NBX0 429 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 DMBX1Q8NFW5 382 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 OR6T1Q8NGN1 323 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 ABHD3Q8WU67 409 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 RASSF5Q8WWW0 418 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 LZICQ8WZA0 190 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms