RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 PIGCQ92535 297 aa3.14□□□□□ -1.91
HMGB3P23-201ENST00000414981 SUSD6Q92537 303 aa3.14□□□□□ -1.91
HMGB3P23-201ENST00000414981 SLC25A46Q96AG3 418 aa3.14□□□□□ -1.91
HMGB3P23-201ENST00000414981 CREB3L1Q96BA8 519 aa3.14□□□□□ -1.91
HMGB3P23-201ENST00000414981 ZNF689Q96CS4 500 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P23-201ENST00000414981 OTUB2Q96DC9 234 aa3.14□□□□□ -1.91
HMGB3P23-201ENST00000414981 CXorf40BQ96DE9 158 aa3.14□□□□□ -1.91
HMGB3P23-201ENST00000414981 SMARCD1Q96GM5 515 aa3.14□□□□□ -1.91
HMGB3P23-201ENST00000414981 PPP1R16AQ96I34 528 aa3.14□□□□□ -1.91
HMGB3P23-201ENST00000414981 TEX37Q96LM6 180 aa3.14□□□□□ -1.91
HMGB3P23-201ENST00000414981 GPR137Q96N19 417 aa3.14□□□□□ -1.91
HMGB3P23-201ENST00000414981 MCCC1Q96RQ3 725 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P23-201ENST00000414981 RASL10BQ96S79 203 aa3.14□□□□□ -1.91
HMGB3P23-201ENST00000414981 MGLLQ99685 303 aa3.14□□□□□ -1.91
HMGB3P23-201ENST00000414981 SOSTQ9BQB4 213 aa3.14□□□□□ -1.91
HMGB3P23-201ENST00000414981 PYGO2Q9BRQ0 406 aa3.14□□□□□ -1.91
HMGB3P23-201ENST00000414981 ZNF717Q9BY31 904 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P23-201ENST00000414981 DPY30Q9C005 99 aa3.14□□□□□ -1.91
HMGB3P23-201ENST00000414981 LAT2Q9GZY6 243 aa3.14□□□□□ -1.91
HMGB3P23-201ENST00000414981 PPA2Q9H2U2 334 aa3.14□□□□□ -1.91
HMGB3P23-201ENST00000414981 PIGUQ9H490 435 aa3.14□□□□□ -1.91
HMGB3P23-201ENST00000414981 ACTL8Q9H568 366 aa3.14□□□□□ -1.91
HMGB3P23-201ENST00000414981 MRPS30Q9NP92 439 aaKnown RBP3.14□□□□□ -1.91
HMGB3P23-201ENST00000414981 MYNNQ9NPC7 610 aa3.14□□□□□ -1.91
HMGB3P23-201ENST00000414981 MRPL17Q9NRX2 175 aaKnown RBP3.14□□□□□ -1.91
HMGB3P23-201ENST00000414981 ABCC13Q9NSE7 274 aa3.14□□□□□ -1.91
HMGB3P23-201ENST00000414981 NLE1Q9NVX2 485 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P23-201ENST00000414981 RBFOX1Q9NWB1 397 aaKnown RBP3.14□□□□□ -1.91
HMGB3P23-201ENST00000414981 GLTPQ9NZD2 209 aa3.14□□□□□ -1.91
HMGB3P23-201ENST00000414981 MAT2BQ9NZL9 334 aa3.14□□□□□ -1.91
HMGB3P23-201ENST00000414981 CD274Q9NZQ7 290 aa3.14□□□□□ -1.91
HMGB3P23-201ENST00000414981 VAPAQ9P0L0 249 aa3.14□□□□□ -1.91
HMGB3P23-201ENST00000414981 COPZ2Q9P299 210 aa3.14□□□□□ -1.91
HMGB3P23-201ENST00000414981 STOX2Q9P2F5 926 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P23-201ENST00000414981 SLC2A6Q9UGQ3 507 aa3.14□□□□□ -1.91
HMGB3P23-201ENST00000414981 ELF5Q9UKW6 265 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P23-201ENST00000414981 RPH3ALQ9UNE2 315 aa3.14□□□□□ -1.91
HMGB3P23-201ENST00000414981 SSR3Q9UNL2 185 aa3.14□□□□□ -1.91
HMGB3P23-201ENST00000414981 ING4Q9UNL4 249 aa3.14□□□□□ -1.91
HMGB3P23-201ENST00000414981 NEU3Q9UQ49 428 aa3.14□□□□□ -1.91
HMGB3P23-201ENST00000414981 CA5BQ9Y2D0 317 aa3.14□□□□□ -1.91
HMGB3P23-201ENST00000414981 FIS1Q9Y3D6 152 aa3.14□□□□□ -1.91
HMGB3P23-201ENST00000414981 NEUROG3Q9Y4Z2 214 aa3.14□□□□□ -1.91
HMGB3P23-201ENST00000414981 CSDC2Q9Y534 153 aaKnown RBP3.14□□□□□ -1.91
HMGB3P23-201ENST00000414981 RLFQ13129 1914 aa3.14□□□□□ -1.91
HMGB3P23-201ENST00000414981 TRIP11Q15643 1979 aa3.14□□□□□ -1.91
HMGB3P23-201ENST00000414981 PHIPQ8WWQ0 1821 aa3.14□□□□□ -1.91
HMGB3P23-201ENST00000414981 SMIM28A0A1B0GU29 152 aa3.13□□□□□ -1.91
HMGB3P23-201ENST00000414981 A0A1B0GVI7 797 aa3.13□□□□□ -1.91
HMGB3P23-201ENST00000414981 A0A1B0GVY2 172 aa3.13□□□□□ -1.91
HMGB3P23-201ENST00000414981 A0A1W2PPQ1 181 aa3.13□□□□□ -1.91
HMGB3P23-201ENST00000414981 TMEM129A0AVI4 362 aa3.13□□□□□ -1.91
HMGB3P23-201ENST00000414981 HYKKA2RU49 373 aa3.13□□□□□ -1.91
HMGB3P23-201ENST00000414981 YJEFN3A6XGL0 299 aa3.13□□□□□ -1.91
HMGB3P23-201ENST00000414981 LEUTXA8MZ59 168 aa3.13□□□□□ -1.91
HMGB3P23-201ENST00000414981 B4DXG7 233 aa3.13□□□□□ -1.91
HMGB3P23-201ENST00000414981 NPIPA2E9PIF3 369 aa3.13□□□□□ -1.91
HMGB3P23-201ENST00000414981 PRAMEF26H0Y7S4 382 aa3.13□□□□□ -1.91
HMGB3P23-201ENST00000414981 SMLR1H3BR10 107 aa3.13□□□□□ -1.91
HMGB3P23-201ENST00000414981 GAPDHSO14556 408 aaPredicted RBP3.13□□□□□ -1.91
HMGB3P23-201ENST00000414981 SLC9A3R1O14745 358 aaPredicted RBP3.13□□□□□ -1.91
HMGB3P23-201ENST00000414981 MYL12BO14950 172 aa3.13□□□□□ -1.91
HMGB3P23-201ENST00000414981 NBR2O15453 112 aa3.13□□□□□ -1.91
HMGB3P23-201ENST00000414981 FLRT2O43155 660 aa3.13□□□□□ -1.91
HMGB3P23-201ENST00000414981 GATCO43716 136 aaKnown RBP3.13□□□□□ -1.91
HMGB3P23-201ENST00000414981 KIAA0513O60268 411 aa3.13□□□□□ -1.91
HMGB3P23-201ENST00000414981 SLC19A2O60779 497 aa3.13□□□□□ -1.91
HMGB3P23-201ENST00000414981 OR7A10O76100 309 aa3.13□□□□□ -1.91
HMGB3P23-201ENST00000414981 HMGN1P05114 100 aa3.13□□□□□ -1.91
HMGB3P23-201ENST00000414981 HLA-DQB2P05538 268 aa3.13□□□□□ -1.91
HMGB3P23-201ENST00000414981 HLA-EP13747 358 aa3.13□□□□□ -1.91
HMGB3P23-201ENST00000414981 FOSL2P15408 326 aa3.13□□□□□ -1.91
HMGB3P23-201ENST00000414981 SPNP16150 400 aa3.13□□□□□ -1.91
HMGB3P23-201ENST00000414981 MYL12AP19105 171 aa3.13□□□□□ -1.91
HMGB3P23-201ENST00000414981 RPS3P23396 243 aaKnown RBP eCLIP3.13□□□□□ -1.91
HMGB3P23-201ENST00000414981 F8A1P23610 371 aa3.13□□□□□ -1.91
HMGB3P23-201ENST00000414981 MPZP25189 248 aa3.13□□□□□ -1.91
HMGB3P23-201ENST00000414981 G0S2P27469 103 aa3.13□□□□□ -1.91
HMGB3P23-201ENST00000414981 GTF2E2P29084 291 aaKnown RBP3.13□□□□□ -1.91
HMGB3P23-201ENST00000414981 ADORA2BP29275 332 aa3.13□□□□□ -1.91
HMGB3P23-201ENST00000414981 FGF9P31371 208 aaPredicted RBP3.13□□□□□ -1.91
HMGB3P23-201ENST00000414981 FMO3P31513 532 aa3.13□□□□□ -1.91
HMGB3P23-201ENST00000414981 GABRA5P31644 462 aa3.13□□□□□ -1.91
HMGB3P23-201ENST00000414981 S100A3P33764 101 aa3.13□□□□□ -1.91
HMGB3P23-201ENST00000414981 SDC2P34741 201 aa3.13□□□□□ -1.91
HMGB3P23-201ENST00000414981 P2RY2P41231 377 aa3.13□□□□□ -1.91
HMGB3P23-201ENST00000414981 NPBWR1P48145 328 aa3.13□□□□□ -1.91
HMGB3P23-201ENST00000414981 STK19P49842 368 aaPredicted RBP3.13□□□□□ -1.91
HMGB3P23-201ENST00000414981 CCL11P51671 97 aa3.13□□□□□ -1.91
HMGB3P23-201ENST00000414981 CCR8P51685 355 aa3.13□□□□□ -1.91
HMGB3P23-201ENST00000414981 MAPK12P53778 367 aa3.13□□□□□ -1.91
HMGB3P23-201ENST00000414981 CDH4P55283 916 aa3.13□□□□□ -1.91
HMGB3P23-201ENST00000414981 FOXA1P55317 472 aa3.13□□□□□ -1.91
HMGB3P23-201ENST00000414981 SMIM11AP58511 58 aa3.13□□□□□ -1.91
HMGB3P23-201ENST00000414981 MTPNP58546 118 aa3.13□□□□□ -1.91
HMGB3P23-201ENST00000414981 ERVPABLB-1P60509 514 aa3.13□□□□□ -1.91
HMGB3P23-201ENST00000414981 RRAS2P62070 204 aaPredicted RBP3.13□□□□□ -1.91
HMGB3P23-201ENST00000414981 LSM3P62310 102 aaKnown RBP3.13□□□□□ -1.91
HMGB3P23-201ENST00000414981 CX3CL1P78423 397 aa3.13□□□□□ -1.91
HMGB3P23-201ENST00000414981 SP4Q02446 784 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms