RNA–Protein interactions for RNA: ENST00000414120.1

LINC00887-202, long intergenic non-protein coding RNA 887, humanhuman

TSL 3 BASIC

Gene LINC00887, Length 2,880 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-202ENST00000414120 UBE2KP61086 200 aa12.51□□□□□ -0.41
LINC00887-202ENST00000414120 RAB11AP62491 216 aa12.51□□□□□ -0.41
LINC00887-202ENST00000414120 EIPR1Q53HC9 387 aa12.51□□□□□ -0.41
LINC00887-202ENST00000414120 RAB41Q5JT25 222 aa12.51□□□□□ -0.41
LINC00887-202ENST00000414120 CMTM1Q8IZ96 169 aa12.51□□□□□ -0.41
LINC00887-202ENST00000414120 Q8WTZ3 238 aa12.51□□□□□ -0.41
LINC00887-202ENST00000414120 ASB11Q8WXH4 323 aa12.51□□□□□ -0.41
LINC00887-202ENST00000414120 CACNG8Q8WXS5 425 aa12.51□□□□□ -0.41
LINC00887-202ENST00000414120 POM121L2Q96KW2 1035 aa12.51□□□□□ -0.41
LINC00887-202ENST00000414120 SEMA4GQ9NTN9 838 aa12.51□□□□□ -0.41
LINC00887-202ENST00000414120 HIF1ANQ9NWT6 349 aa12.51□□□□□ -0.41
LINC00887-202ENST00000414120 SOCS6O14544 535 aa12.5□□□□□ -0.41
LINC00887-202ENST00000414120 WISP3O95389 354 aaPredicted RBP12.5□□□□□ -0.41
LINC00887-202ENST00000414120 DCNP07585 359 aaKnown RBP12.5□□□□□ -0.41
LINC00887-202ENST00000414120 OR13C7P0DN81 318 aa12.5□□□□□ -0.41
LINC00887-202ENST00000414120 FAHP16930 419 aa12.5□□□□□ -0.41
LINC00887-202ENST00000414120 CTSSP25774 331 aa12.5□□□□□ -0.41
LINC00887-202ENST00000414120 MC4RP32245 332 aa12.5□□□□□ -0.41
LINC00887-202ENST00000414120 FOXA1P55317 472 aa12.5□□□□□ -0.41
LINC00887-202ENST00000414120 TMEM220Q6QAJ8 160 aa12.5□□□□□ -0.41
LINC00887-202ENST00000414120 SLCO4C1Q6ZQN7 724 aa12.5□□□□□ -0.41
LINC00887-202ENST00000414120 FRMD1Q8N878 549 aa12.5□□□□□ -0.41
LINC00887-202ENST00000414120 NOXO1Q8NFA2 376 aa12.5□□□□□ -0.41
LINC00887-202ENST00000414120 BRIX1Q8TDN6 353 aaKnown RBP12.5□□□□□ -0.41
LINC00887-202ENST00000414120 SMAD5Q99717 465 aaKnown RBP12.5□□□□□ -0.41
LINC00887-202ENST00000414120 MARCH2Q9P0N8 246 aa12.5□□□□□ -0.41
LINC00887-202ENST00000414120 PGPEP1LA6NFU8 196 aa12.5□□□□□ -0.41
LINC00887-202ENST00000414120 UMAD1C9J7I0 102 aa12.5□□□□□ -0.41
LINC00887-202ENST00000414120 FAAHO00519 579 aa12.5□□□□□ -0.41
LINC00887-202ENST00000414120 PMS2P2O95744 297 aa12.5□□□□□ -0.41
LINC00887-202ENST00000414120 CSF1P09603 554 aa12.5□□□□□ -0.41
LINC00887-202ENST00000414120 FCARP24071 287 aa12.5□□□□□ -0.41
LINC00887-202ENST00000414120 CYP2F1P24903 491 aa12.5□□□□□ -0.41
LINC00887-202ENST00000414120 SNCAP37840 140 aa12.5□□□□□ -0.41
LINC00887-202ENST00000414120 SULT1A2P50226 295 aa12.5□□□□□ -0.41
LINC00887-202ENST00000414120 HMGA2P52926 109 aa12.5□□□□□ -0.41
LINC00887-202ENST00000414120 RPS27LQ71UM5 84 aaKnown RBP12.5□□□□□ -0.41
LINC00887-202ENST00000414120 TDHQ8IZJ6 230 aa12.5□□□□□ -0.41
LINC00887-202ENST00000414120 LGI4Q8N135 537 aa12.5□□□□□ -0.41
LINC00887-202ENST00000414120 SIDT2Q8NBJ9 832 aaKnown RBP12.5□□□□□ -0.41
LINC00887-202ENST00000414120 C2CD4AQ8NCU7 369 aaPredicted RBP12.5□□□□□ -0.41
LINC00887-202ENST00000414120 OR5AK2Q8NH90 309 aa12.5□□□□□ -0.41
LINC00887-202ENST00000414120 SFXN5Q8TD22 340 aa12.5□□□□□ -0.41
LINC00887-202ENST00000414120 SLC6A18Q96N87 628 aa12.5□□□□□ -0.41
LINC00887-202ENST00000414120 NRIP3Q9NQ35 241 aa12.5□□□□□ -0.41
LINC00887-202ENST00000414120 FKBP11Q9NYL4 201 aa12.5□□□□□ -0.41
LINC00887-202ENST00000414120 RASD1Q9Y272 281 aa12.5□□□□□ -0.41
LINC00887-202ENST00000414120 TRIP11Q15643 1979 aa12.5□□□□□ -0.41
LINC00887-202ENST00000414120 TMEM272A0A1B0GTI8 110 aa12.49□□□□□ -0.41
LINC00887-202ENST00000414120 C1QTNF3-AMACRE9PGA6 284 aa12.49□□□□□ -0.41
LINC00887-202ENST00000414120 HOXB9P17482 250 aaPredicted RBP12.49□□□□□ -0.41
LINC00887-202ENST00000414120 TFPI2P48307 235 aa12.49□□□□□ -0.41
LINC00887-202ENST00000414120 CSRP2Q16527 193 aa12.49□□□□□ -0.41
LINC00887-202ENST00000414120 LY6G6FQ5SQ64 297 aa12.49□□□□□ -0.41
LINC00887-202ENST00000414120 TMPRSS11BQ86T26 416 aa12.49□□□□□ -0.41
LINC00887-202ENST00000414120 MUC20Q8N307 709 aaPredicted RBP12.49□□□□□ -0.41
LINC00887-202ENST00000414120 C1orf127Q8N9H9 656 aa12.49□□□□□ -0.41
LINC00887-202ENST00000414120 LRFN3Q9BTN0 628 aa12.49□□□□□ -0.41
LINC00887-202ENST00000414120 SSBP4Q9BWG4 385 aaPredicted RBP12.49□□□□□ -0.41
LINC00887-202ENST00000414120 SLC17A5Q9NRA2 495 aa12.49□□□□□ -0.41
LINC00887-202ENST00000414120 MRPL22Q9NWU5 206 aaKnown RBP12.49□□□□□ -0.41
LINC00887-202ENST00000414120 PATJQ8NI35 1801 aa12.49□□□□□ -0.41
LINC00887-202ENST00000414120 PRUNE2Q8WUY3 3088 aa12.49□□□□□ -0.41
LINC00887-202ENST00000414120 TRBV6-7A0A0A0MS04 114 aa12.49□□□□□ -0.41
LINC00887-202ENST00000414120 VSTM2BA6NLU5 285 aa12.49□□□□□ -0.41
LINC00887-202ENST00000414120 B9A039 149 aa12.49□□□□□ -0.41
LINC00887-202ENST00000414120 SLC16A5O15375 505 aa12.49□□□□□ -0.41
LINC00887-202ENST00000414120 PGAM2P15259 253 aa12.49□□□□□ -0.41
LINC00887-202ENST00000414120 CYB561P49447 251 aa12.49□□□□□ -0.41
LINC00887-202ENST00000414120 WNT3AP56704 352 aa12.49□□□□□ -0.41
LINC00887-202ENST00000414120 PAX2Q02962 417 aa12.49□□□□□ -0.41
LINC00887-202ENST00000414120 PLPPR5Q32ZL2 321 aa12.49□□□□□ -0.41
LINC00887-202ENST00000414120 REEP3Q6NUK4 255 aa12.49□□□□□ -0.41
LINC00887-202ENST00000414120 RHEBL1Q8TAI7 183 aa12.49□□□□□ -0.41
LINC00887-202ENST00000414120 TSLPQ969D9 159 aa12.49□□□□□ -0.41
LINC00887-202ENST00000414120 CDH20Q9HBT6 801 aa12.49□□□□□ -0.41
LINC00887-202ENST00000414120 SIDT1Q9NXL6 827 aaKnown RBP12.49□□□□□ -0.41
LINC00887-202ENST00000414120 FARSAQ9Y285 508 aaKnown RBP12.49□□□□□ -0.41
LINC00887-202ENST00000414120 MEMO1Q9Y316 297 aa12.49□□□□□ -0.41
LINC00887-202ENST00000414120 TIMM13Q9Y5L4 95 aaPredicted RBP12.49□□□□□ -0.41
LINC00887-202ENST00000414120 TRAV26-1A0A087WT03 109 aa12.48□□□□□ -0.41
LINC00887-202ENST00000414120 CDHR4A6H8M9 788 aa12.48□□□□□ -0.41
LINC00887-202ENST00000414120 DIRAS1O95057 198 aa12.48□□□□□ -0.41
LINC00887-202ENST00000414120 SCGB1D1O95968 90 aa12.48□□□□□ -0.41
LINC00887-202ENST00000414120 ATP1B1P05026 303 aa12.48□□□□□ -0.41
LINC00887-202ENST00000414120 EPCAMP16422 314 aa12.48□□□□□ -0.41
LINC00887-202ENST00000414120 ST3GAL3Q11203 375 aa12.48□□□□□ -0.41
LINC00887-202ENST00000414120 RBBP7Q16576 425 aa12.48□□□□□ -0.41
LINC00887-202ENST00000414120 MPPE1Q53F39 396 aa12.48□□□□□ -0.41
LINC00887-202ENST00000414120 PODNL1Q6PEZ8 512 aa12.48□□□□□ -0.41
LINC00887-202ENST00000414120 PAQR6Q6TCH4 344 aa12.48□□□□□ -0.41
LINC00887-202ENST00000414120 TTLL10Q6ZVT0 673 aa12.48□□□□□ -0.41
LINC00887-202ENST00000414120 RD3Q7Z3Z2 195 aa12.48□□□□□ -0.41
LINC00887-202ENST00000414120 WDTC1Q8N5D0 677 aa12.48□□□□□ -0.41
LINC00887-202ENST00000414120 OR4D6Q8NGJ1 314 aa12.48□□□□□ -0.41
LINC00887-202ENST00000414120 OR13C4Q8NGS5 318 aa12.48□□□□□ -0.41
LINC00887-202ENST00000414120 OR52J3Q8NH60 311 aa12.48□□□□□ -0.41
LINC00887-202ENST00000414120 GEMIN6Q8WXD5 167 aaKnown RBP12.48□□□□□ -0.41
LINC00887-202ENST00000414120 IL4I1Q96RQ9 567 aa12.48□□□□□ -0.41
LINC00887-202ENST00000414120 PKIBQ9C010 78 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms