RNA–Protein interactions for RNA: ENST00000413911.1

AC005540.1-201, humanhuman

TSL 3 BASIC

Gene AC005540.1, Length 919 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005540.1-201ENST00000413911 ZNF682O95780 498 aa20.39■□□□□ 0.85
AC005540.1-201ENST00000413911 PMELP40967 661 aa20.39■□□□□ 0.85
AC005540.1-201ENST00000413911 KRR1Q13601 381 aaKnown RBP20.39■□□□□ 0.85
AC005540.1-201ENST00000413911 MAPRE2Q15555 327 aa20.39■□□□□ 0.85
AC005540.1-201ENST00000413911 FAM201AQ5SY85 155 aa20.39■□□□□ 0.85
AC005540.1-201ENST00000413911 FBXW12Q6X9E4 464 aa20.39■□□□□ 0.85
AC005540.1-201ENST00000413911 SLC15A3Q8IY34 581 aa20.39■□□□□ 0.85
AC005540.1-201ENST00000413911 MUC20Q8N307 709 aaPredicted RBP20.39■□□□□ 0.85
AC005540.1-201ENST00000413911 PARP8Q8N3A8 854 aa20.39■□□□□ 0.85
AC005540.1-201ENST00000413911 POU5F2Q8N7G0 328 aa20.39■□□□□ 0.85
AC005540.1-201ENST00000413911 RCN3Q96D15 328 aa20.39■□□□□ 0.85
AC005540.1-201ENST00000413911 SSBP3Q9BWW4 388 aaPredicted RBP20.39■□□□□ 0.85
AC005540.1-201ENST00000413911 FGFR1OP2Q9NVK5 253 aa20.39■□□□□ 0.85
AC005540.1-201ENST00000413911 IL20RAQ9UHF4 553 aa20.39■□□□□ 0.85
AC005540.1-201ENST00000413911 LRCH1Q9Y2L9 728 aa20.39■□□□□ 0.85
AC005540.1-201ENST00000413911 MDFIC2A0A1B0GVS7 189 aa20.38■□□□□ 0.85
AC005540.1-201ENST00000413911 PLATP00750 562 aa20.38■□□□□ 0.85
AC005540.1-201ENST00000413911 SELEP16581 610 aa20.38■□□□□ 0.85
AC005540.1-201ENST00000413911 FXYD6P3P58550 94 aa20.38■□□□□ 0.85
AC005540.1-201ENST00000413911 LSM6P62312 80 aaKnown RBP20.38■□□□□ 0.85
AC005540.1-201ENST00000413911 DBPQ10586 325 aaPredicted RBP20.38■□□□□ 0.85
AC005540.1-201ENST00000413911 LEG1Q6P5S2 330 aa20.38■□□□□ 0.85
AC005540.1-201ENST00000413911 C9orf139Q6ZV77 190 aa20.38■□□□□ 0.85
AC005540.1-201ENST00000413911 PTCHD4Q6ZW05 846 aa20.38■□□□□ 0.85
AC005540.1-201ENST00000413911 CBLL1Q75N03 491 aa20.38■□□□□ 0.85
AC005540.1-201ENST00000413911 KLBQ86Z14 1044 aa20.38■□□□□ 0.85
AC005540.1-201ENST00000413911 GLB1L2Q8IW92 636 aa20.38■□□□□ 0.85
AC005540.1-201ENST00000413911 OR8G5Q8NG78 346 aa20.38■□□□□ 0.85
AC005540.1-201ENST00000413911 SLC7A13Q8TCU3 470 aa20.38■□□□□ 0.85
AC005540.1-201ENST00000413911 UPRTQ96BW1 309 aa20.38■□□□□ 0.85
AC005540.1-201ENST00000413911 FAM46AQ96IP4 442 aaKnown RBP20.38■□□□□ 0.85
AC005540.1-201ENST00000413911 HSH2DQ96JZ2 352 aa20.38■□□□□ 0.85
AC005540.1-201ENST00000413911 COG8Q96MW5 612 aa20.38■□□□□ 0.85
AC005540.1-201ENST00000413911 TMEM246Q9BRR3 403 aa20.38■□□□□ 0.85
AC005540.1-201ENST00000413911 NMNAT1Q9HAN9 279 aaPredicted RBP20.38■□□□□ 0.85
AC005540.1-201ENST00000413911 NRIP3Q9NQ35 241 aa20.38■□□□□ 0.85
AC005540.1-201ENST00000413911 VSX1Q9NZR4 365 aaPredicted RBP20.38■□□□□ 0.85
AC005540.1-201ENST00000413911 SIGLEC7Q9Y286 467 aa20.38■□□□□ 0.85
AC005540.1-201ENST00000413911 IGHV2-70DA0A0C4DH43 119 aa20.37■□□□□ 0.85
AC005540.1-201ENST00000413911 CXCR6O00574 342 aa20.37■□□□□ 0.85
AC005540.1-201ENST00000413911 KHDRBS3O75525 346 aaKnown RBP20.37■□□□□ 0.85
AC005540.1-201ENST00000413911 RPS2P15880 293 aaKnown RBP20.37■□□□□ 0.85
AC005540.1-201ENST00000413911 PRSS12P56730 875 aa20.37■□□□□ 0.85
AC005540.1-201ENST00000413911 LIPEQ05469 1076 aa20.37■□□□□ 0.85
AC005540.1-201ENST00000413911 RSPO1Q2MKA7 263 aaPredicted RBP20.37■□□□□ 0.85
AC005540.1-201ENST00000413911 IFI44LQ53G44 452 aa20.37■□□□□ 0.85
AC005540.1-201ENST00000413911 SLC25A28Q96A46 364 aa20.37■□□□□ 0.85
AC005540.1-201ENST00000413911 NUAK2Q9H093 628 aa20.37■□□□□ 0.85
AC005540.1-201ENST00000413911 ARMCX1Q9P291 453 aa20.37■□□□□ 0.85
AC005540.1-201ENST00000413911 F5H5P2 479 aa20.36■□□□□ 0.85
AC005540.1-201ENST00000413911 DCTN6O00399 190 aa20.36■□□□□ 0.85
AC005540.1-201ENST00000413911 PPIAL4GP0DN37 164 aa20.36■□□□□ 0.85
AC005540.1-201ENST00000413911 TROVE2P10155 538 aaKnown RBP eCLIP20.36■□□□□ 0.85
AC005540.1-201ENST00000413911 SDHAP31040 664 aa20.36■□□□□ 0.85
AC005540.1-201ENST00000413911 CDKN2AP42771 156 aaKnown RBP20.36■□□□□ 0.85
AC005540.1-201ENST00000413911 HIST1H3AP68431 136 aa20.36■□□□□ 0.85
AC005540.1-201ENST00000413911 KCNMB1Q16558 191 aa20.36■□□□□ 0.85
AC005540.1-201ENST00000413911 MEP1BQ16820 701 aa20.36■□□□□ 0.85
AC005540.1-201ENST00000413911 HIST2H3PS2Q5TEC6 136 aa20.36■□□□□ 0.85
AC005540.1-201ENST00000413911 HIST2H3AQ71DI3 136 aa20.36■□□□□ 0.85
AC005540.1-201ENST00000413911 MOGAT3Q86VF5 341 aa20.36■□□□□ 0.85
AC005540.1-201ENST00000413911 OR13G1Q8NGZ3 307 aa20.36■□□□□ 0.85
AC005540.1-201ENST00000413911 RAB40AQ8WXH6 277 aa20.36■□□□□ 0.85
AC005540.1-201ENST00000413911 TSSK2Q96PF2 358 aa20.36■□□□□ 0.85
AC005540.1-201ENST00000413911 SLC30A2Q9BRI3 323 aa20.36■□□□□ 0.85
AC005540.1-201ENST00000413911 WDR76Q9H967 626 aa20.36■□□□□ 0.85
AC005540.1-201ENST00000413911 LHFPL6Q9Y693 200 aa20.36■□□□□ 0.85
AC005540.1-201ENST00000413911 VWFP04275 2813 aa20.35■□□□□ 0.85
AC005540.1-201ENST00000413911 NME4O00746 187 aa20.35■□□□□ 0.85
AC005540.1-201ENST00000413911 SOCS2O14508 198 aa20.35■□□□□ 0.85
AC005540.1-201ENST00000413911 NDUFB2O95178 105 aa20.35■□□□□ 0.85
AC005540.1-201ENST00000413911 MDKP21741 143 aaPredicted RBP20.35■□□□□ 0.85
AC005540.1-201ENST00000413911 IL13RA1P78552 427 aa20.35■□□□□ 0.85
AC005540.1-201ENST00000413911 SLC27A4Q6P1M0 643 aa20.35■□□□□ 0.85
AC005540.1-201ENST00000413911 LRRN1Q6UXK5 716 aa20.35■□□□□ 0.85
AC005540.1-201ENST00000413911 TREML4Q6UXN2 200 aa20.35■□□□□ 0.85
AC005540.1-201ENST00000413911 BHLHE23Q8NDY6 225 aa20.35■□□□□ 0.85
AC005540.1-201ENST00000413911 GPX7Q96SL4 187 aaPredicted RBP20.35■□□□□ 0.85
AC005540.1-201ENST00000413911 MRGBPQ9NV56 204 aa20.35■□□□□ 0.85
AC005540.1-201ENST00000413911 ATPIF1Q9UII2 106 aa20.35■□□□□ 0.85
AC005540.1-201ENST00000413911 IER3IP1Q9Y5U9 82 aa20.35■□□□□ 0.85
AC005540.1-201ENST00000413911 CAPN7Q9Y6W3 813 aa20.35■□□□□ 0.85
AC005540.1-201ENST00000413911 TRAV40A0A0B4J280 105 aa20.34■□□□□ 0.85
AC005540.1-201ENST00000413911 J3QW42 95 aa20.34■□□□□ 0.85
AC005540.1-201ENST00000413911 IFNL4K9M1U5 179 aa20.34■□□□□ 0.85
AC005540.1-201ENST00000413911 SERPINA1P01009 418 aa20.34■□□□□ 0.85
AC005540.1-201ENST00000413911 OMGP23515 440 aa20.34■□□□□ 0.85
AC005540.1-201ENST00000413911 OMPP47874 163 aa20.34■□□□□ 0.85
AC005540.1-201ENST00000413911 RGS6P49758 472 aa20.34■□□□□ 0.85
AC005540.1-201ENST00000413911 GNB2P62879 340 aa20.34■□□□□ 0.85
AC005540.1-201ENST00000413911 HOXA4Q00056 320 aaPredicted RBP20.34■□□□□ 0.85
AC005540.1-201ENST00000413911 ZNF404Q494X3 552 aa20.34■□□□□ 0.85
AC005540.1-201ENST00000413911 CORO6Q6QEF8 472 aa20.34■□□□□ 0.85
AC005540.1-201ENST00000413911 LYPD2Q6UXB3 125 aa20.34■□□□□ 0.85
AC005540.1-201ENST00000413911 FKBP9P1Q75LS8 142 aa20.34■□□□□ 0.85
AC005540.1-201ENST00000413911 ZSCAN2Q7Z7L9 614 aaPredicted RBP20.34■□□□□ 0.85
AC005540.1-201ENST00000413911 APOBEC3DQ96AK3 386 aaPredicted RBP20.34■□□□□ 0.85
AC005540.1-201ENST00000413911 ZNF582Q96NG8 517 aaPredicted RBP20.34■□□□□ 0.85
AC005540.1-201ENST00000413911 MIOXQ9UGB7 285 aa20.34■□□□□ 0.85
AC005540.1-201ENST00000413911 ENPP4Q9Y6X5 453 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms