RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 PCYT2Q99447 389 aa4.71□□□□□ -1.66
HERC4-205ENST00000412272 COPS8Q99627 209 aa4.71□□□□□ -1.66
HERC4-205ENST00000412272 ALG9Q9H6U8 611 aa4.71□□□□□ -1.66
HERC4-205ENST00000412272 GPN1Q9HCN4 374 aaPredicted RBP4.71□□□□□ -1.66
HERC4-205ENST00000412272 SIRT3Q9NTG7 399 aaPredicted RBP4.71□□□□□ -1.66
HERC4-205ENST00000412272 SNX11Q9Y5W9 270 aa4.71□□□□□ -1.66
HERC4-205ENST00000412272 ADAMTSL1Q8N6G6 1762 aa4.71□□□□□ -1.66
HERC4-205ENST00000412272 BRWD3Q6RI45 1802 aa4.71□□□□□ -1.66
HERC4-205ENST00000412272 TGIF2-C20orf24A0A0A6YYL0 155 aa4.71□□□□□ -1.66
HERC4-205ENST00000412272 ARPC3O15145 178 aa4.71□□□□□ -1.66
HERC4-205ENST00000412272 CD160O95971 181 aa4.71□□□□□ -1.66
HERC4-205ENST00000412272 CD8AP01732 235 aa4.71□□□□□ -1.66
HERC4-205ENST00000412272 SERPIND1P05546 499 aa4.71□□□□□ -1.66
HERC4-205ENST00000412272 FUT1P19526 365 aa4.71□□□□□ -1.66
HERC4-205ENST00000412272 DPP4P27487 766 aa4.71□□□□□ -1.66
HERC4-205ENST00000412272 TAF6P49848 677 aa4.71□□□□□ -1.66
HERC4-205ENST00000412272 GEMP55040 296 aa4.71□□□□□ -1.66
HERC4-205ENST00000412272 CCL7P80098 99 aa4.71□□□□□ -1.66
HERC4-205ENST00000412272 PTGES3Q15185 160 aaKnown RBP4.71□□□□□ -1.66
HERC4-205ENST00000412272 ZNF699Q32M78 642 aa4.71□□□□□ -1.66
HERC4-205ENST00000412272 ALG10BQ5I7T1 473 aa4.71□□□□□ -1.66
HERC4-205ENST00000412272 OR1N2Q8NGR9 330 aa4.71□□□□□ -1.66
HERC4-205ENST00000412272 Q8WTZ3 238 aa4.71□□□□□ -1.66
HERC4-205ENST00000412272 TSSK3Q96PN8 268 aa4.71□□□□□ -1.66
HERC4-205ENST00000412272 FEVQ99581 238 aa4.71□□□□□ -1.66
HERC4-205ENST00000412272 FAIM2Q9BWQ8 316 aa4.71□□□□□ -1.66
HERC4-205ENST00000412272 TMEM38BQ9NVV0 291 aa4.71□□□□□ -1.66
HERC4-205ENST00000412272 ZNF70Q9UC06 446 aaPredicted RBP4.71□□□□□ -1.66
HERC4-205ENST00000412272 ZNF337Q9Y3M9 751 aa4.71□□□□□ -1.66
HERC4-205ENST00000412272 OR2C1O95371 312 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 MT-CO1P00395 513 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 OR10J4P0C629 311 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 SLC35G6P0C7Q6 338 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 AZU1P20160 251 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 GDF1P27539 372 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 ARL2P36404 184 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 GPR12P47775 334 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 ELLP55199 621 aaPredicted RBP4.7□□□□□ -1.66
HERC4-205ENST00000412272 S100A10P60903 97 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 RAB1AP62820 205 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 RPS25P62851 125 aaKnown RBP4.7□□□□□ -1.66
HERC4-205ENST00000412272 FAM3AP98173 230 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 CTBP1Q13363 440 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 ZNF234Q14588 700 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 TTLL4Q14679 1199 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 PCBP2Q15366 365 aaKnown RBP eCLIP4.7□□□□□ -1.662e-10■□□□□ 9.6
HERC4-205ENST00000412272 ELOBQ15370 118 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 FAM110CQ1W6H9 321 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 TCTEX1D4Q5JR98 221 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 MRGPREQ86SM8 312 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 LAPTM4BQ86VI4 370 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 GTPBP8Q8N3Z3 284 aaPredicted RBP4.7□□□□□ -1.66
HERC4-205ENST00000412272 CCNYQ8ND76 341 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 OR56A1Q8NGH5 318 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 OR1J1Q8NGS3 322 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 THEM6Q8WUY1 208 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 C20orf24Q9BUV8 137 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 MBNL1Q9NR56 388 aaKnown RBP4.7□□□□□ -1.66
HERC4-205ENST00000412272 OSER1Q9NX31 292 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 ABI3Q9P2A4 366 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 MRM2Q9UI43 246 aaKnown RBP4.7□□□□□ -1.66
HERC4-205ENST00000412272 SSUH2Q9Y2M2 353 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 A0A1B0GTL3 188 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 A0A1B0GU03 582 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 NPIPB15A6NHN6 443 aaPredicted RBP4.7□□□□□ -1.66
HERC4-205ENST00000412272 OR1F1O43749 312 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 STK16O75716 305 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 GJB5O95377 273 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 CTSDP07339 412 aaPredicted RBP4.7□□□□□ -1.66
HERC4-205ENST00000412272 AGTR1P30556 359 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 ARL3P36405 182 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 GIPRP48546 466 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 POLR2HP52434 150 aaKnown RBP4.7□□□□□ -1.66
HERC4-205ENST00000412272 CRYBA2P53672 197 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 GTF2H3Q13889 308 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 MMDQ15546 238 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 CSRP2Q16527 193 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 COA6Q5JTJ3 125 aaKnown RBP4.7□□□□□ -1.66
HERC4-205ENST00000412272 PLEKHS1Q5SXH7 462 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 PHF19Q5T6S3 580 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 SYPL2Q5VXT5 272 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 METRNLQ641Q3 311 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 GLT8D1Q68CQ7 371 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 ESPNLQ6ZVH7 1005 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 SCD5Q86SK9 330 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 FAM58AQ8N1B3 248 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 SLC5A8Q8N695 610 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 ZSCAN4Q8NAM6 433 aaPredicted RBP4.7□□□□□ -1.66
HERC4-205ENST00000412272 OR13C4Q8NGS5 318 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 PRR7Q8TB68 274 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 STAG3L4Q8TBR4 150 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 ZNF775Q96BV0 537 aaPredicted RBP4.7□□□□□ -1.66
HERC4-205ENST00000412272 KIRREL1Q96J84 757 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 NSUN5Q96P11 429 aaKnown RBP4.7□□□□□ -1.66
HERC4-205ENST00000412272 TMEM185BQ9H7F4 350 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 GEMIN7Q9H840 131 aaKnown RBP4.7□□□□□ -1.66
HERC4-205ENST00000412272 WDR54Q9H977 334 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 SEMA4GQ9NTN9 838 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 GPATCH2Q9NW75 528 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 TAS2R13Q9NYV9 303 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms