RNA–Protein interactions for RNA: ENST00000412256.1

RAB11FIP3-202, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-202ENST00000412256 ZNF582Q96NG8 517 aaPredicted RBP11.68□□□□□ -0.54
RAB11FIP3-202ENST00000412256 NDEL1Q9GZM8 345 aa11.68□□□□□ -0.54
RAB11FIP3-202ENST00000412256 SYT4Q9H2B2 425 aa11.68□□□□□ -0.54
RAB11FIP3-202ENST00000412256 SAR1AQ9NR31 198 aa11.68□□□□□ -0.54
RAB11FIP3-202ENST00000412256 MRGBPQ9NV56 204 aa11.68□□□□□ -0.54
RAB11FIP3-202ENST00000412256 MIOXQ9UGB7 285 aa11.68□□□□□ -0.54
RAB11FIP3-202ENST00000412256 TRRAPQ9Y4A5 3859 aa11.68□□□□□ -0.54
RAB11FIP3-202ENST00000412256 TEX13CA0A0J9YWL9 993 aa11.67□□□□□ -0.54
RAB11FIP3-202ENST00000412256 H0YL77 283 aa11.67□□□□□ -0.54
RAB11FIP3-202ENST00000412256 CLDN34H7C241 214 aa11.67□□□□□ -0.54
RAB11FIP3-202ENST00000412256 RER1O15258 196 aa11.67□□□□□ -0.54
RAB11FIP3-202ENST00000412256 TROVE2P10155 538 aaKnown RBP eCLIP11.67□□□□□ -0.54
RAB11FIP3-202ENST00000412256 ZNF26P17031 533 aaPredicted RBP11.67□□□□□ -0.54
RAB11FIP3-202ENST00000412256 OMGP23515 440 aa11.67□□□□□ -0.54
RAB11FIP3-202ENST00000412256 SRP9P49458 86 aaKnown RBP11.67□□□□□ -0.54
RAB11FIP3-202ENST00000412256 DEFA6Q01524 100 aa11.67□□□□□ -0.54
RAB11FIP3-202ENST00000412256 IFI44LQ53G44 452 aa11.67□□□□□ -0.54
RAB11FIP3-202ENST00000412256 CCDC92Q53HC0 331 aaPredicted RBP11.67□□□□□ -0.54
RAB11FIP3-202ENST00000412256 C16orf87Q6PH81 154 aa11.67□□□□□ -0.54
RAB11FIP3-202ENST00000412256 TMPRSS11FQ6ZWK6 438 aa11.67□□□□□ -0.54
RAB11FIP3-202ENST00000412256 SPATC1Q76KD6 591 aa11.67□□□□□ -0.54
RAB11FIP3-202ENST00000412256 HDXQ7Z353 690 aa11.67□□□□□ -0.54
RAB11FIP3-202ENST00000412256 MOGAT3Q86VF5 341 aa11.67□□□□□ -0.54
RAB11FIP3-202ENST00000412256 KLBQ86Z14 1044 aa11.67□□□□□ -0.54
RAB11FIP3-202ENST00000412256 BHLHE23Q8NDY6 225 aa11.67□□□□□ -0.54
RAB11FIP3-202ENST00000412256 ZDHHC16Q969W1 377 aa11.67□□□□□ -0.54
RAB11FIP3-202ENST00000412256 RASD2Q96D21 266 aa11.67□□□□□ -0.54
RAB11FIP3-202ENST00000412256 MEGF10Q96KG7 1140 aa11.67□□□□□ -0.54
RAB11FIP3-202ENST00000412256 NMNAT1Q9HAN9 279 aaPredicted RBP11.67□□□□□ -0.54
RAB11FIP3-202ENST00000412256 TNFRSF19Q9NS68 423 aa11.67□□□□□ -0.54
RAB11FIP3-202ENST00000412256 GMPR2Q9P2T1 348 aaKnown RBP11.67□□□□□ -0.54
RAB11FIP3-202ENST00000412256 POLR1DQ9Y2S0 133 aa11.67□□□□□ -0.54
RAB11FIP3-202ENST00000412256 OR6C6A6NF89 314 aa11.66□□□□□ -0.54
RAB11FIP3-202ENST00000412256 LRRC30A6NM36 301 aa11.66□□□□□ -0.54
RAB11FIP3-202ENST00000412256 F5H5P2 479 aa11.66□□□□□ -0.54
RAB11FIP3-202ENST00000412256 SOCS2O14508 198 aa11.66□□□□□ -0.54
RAB11FIP3-202ENST00000412256 IMPA2O14732 288 aa11.66□□□□□ -0.54
RAB11FIP3-202ENST00000412256 MDKP21741 143 aaPredicted RBP11.66□□□□□ -0.54
RAB11FIP3-202ENST00000412256 RGS6P49758 472 aa11.66□□□□□ -0.54
RAB11FIP3-202ENST00000412256 LSM6P62312 80 aaKnown RBP11.66□□□□□ -0.54
RAB11FIP3-202ENST00000412256 KRR1Q13601 381 aaKnown RBP11.66□□□□□ -0.54
RAB11FIP3-202ENST00000412256 FAM201AQ5SY85 155 aa11.66□□□□□ -0.54
RAB11FIP3-202ENST00000412256 FBXW12Q6X9E4 464 aa11.66□□□□□ -0.54
RAB11FIP3-202ENST00000412256 FAM122BQ7Z309 247 aa11.66□□□□□ -0.54
RAB11FIP3-202ENST00000412256 CYP4Z1Q86W10 505 aa11.66□□□□□ -0.54
RAB11FIP3-202ENST00000412256 APOBEC3DQ96AK3 386 aaPredicted RBP11.66□□□□□ -0.54
RAB11FIP3-202ENST00000412256 TMIGD2Q96BF3 282 aa11.66□□□□□ -0.54
RAB11FIP3-202ENST00000412256 NEIL1Q96FI4 390 aaPredicted RBP11.66□□□□□ -0.54
RAB11FIP3-202ENST00000412256 FAM46AQ96IP4 442 aaKnown RBP11.66□□□□□ -0.54
RAB11FIP3-202ENST00000412256 TMEM246Q9BRR3 403 aa11.66□□□□□ -0.54
RAB11FIP3-202ENST00000412256 WDR76Q9H967 626 aa11.66□□□□□ -0.54
RAB11FIP3-202ENST00000412256 TMEM100Q9NV29 134 aa11.66□□□□□ -0.54
RAB11FIP3-202ENST00000412256 CMTM6Q9NX76 183 aa11.66□□□□□ -0.54
RAB11FIP3-202ENST00000412256 IER3IP1Q9Y5U9 82 aa11.66□□□□□ -0.54
RAB11FIP3-202ENST00000412256 TANC2Q9HCD6 1990 aa11.65□□□□□ -0.54
RAB11FIP3-202ENST00000412256 TRAV40A0A0B4J280 105 aa11.65□□□□□ -0.54
RAB11FIP3-202ENST00000412256 IGHV2-70DA0A0C4DH43 119 aa11.65□□□□□ -0.54
RAB11FIP3-202ENST00000412256 KIR2DS1A0A191URI9 304 aa11.65□□□□□ -0.54
RAB11FIP3-202ENST00000412256 MDFIC2A0A1B0GVS7 189 aa11.65□□□□□ -0.54
RAB11FIP3-202ENST00000412256 CXCR6O00574 342 aa11.65□□□□□ -0.54
RAB11FIP3-202ENST00000412256 HOXA3O43365 443 aaPredicted RBP11.65□□□□□ -0.54
RAB11FIP3-202ENST00000412256 PTP4A3O75365 173 aa11.65□□□□□ -0.54
RAB11FIP3-202ENST00000412256 NDUFB2O95178 105 aa11.65□□□□□ -0.54
RAB11FIP3-202ENST00000412256 PPIAL4GP0DN37 164 aa11.65□□□□□ -0.54
RAB11FIP3-202ENST00000412256 CPT2P23786 658 aa11.65□□□□□ -0.54
RAB11FIP3-202ENST00000412256 SDHAP31040 664 aa11.65□□□□□ -0.54
RAB11FIP3-202ENST00000412256 PAX2Q02962 417 aa11.65□□□□□ -0.54
RAB11FIP3-202ENST00000412256 LIPEQ05469 1076 aa11.65□□□□□ -0.54
RAB11FIP3-202ENST00000412256 GPR139Q6DWJ6 353 aa11.65□□□□□ -0.54
RAB11FIP3-202ENST00000412256 NLRC3Q7RTR2 1065 aa11.65□□□□□ -0.54
RAB11FIP3-202ENST00000412256 POU5F2Q8N7G0 328 aa11.65□□□□□ -0.54
RAB11FIP3-202ENST00000412256 FAM156AQ8NDB6 213 aa11.65□□□□□ -0.54
RAB11FIP3-202ENST00000412256 GJC3Q8NFK1 279 aa11.65□□□□□ -0.54
RAB11FIP3-202ENST00000412256 OR8B3Q8NGG8 313 aa11.65□□□□□ -0.54
RAB11FIP3-202ENST00000412256 OR10S1Q8NGN2 331 aa11.65□□□□□ -0.54
RAB11FIP3-202ENST00000412256 UPRTQ96BW1 309 aa11.65□□□□□ -0.54
RAB11FIP3-202ENST00000412256 RCN3Q96D15 328 aa11.65□□□□□ -0.54
RAB11FIP3-202ENST00000412256 HSH2DQ96JZ2 352 aa11.65□□□□□ -0.54
RAB11FIP3-202ENST00000412256 OR8B2Q96RD0 313 aa11.65□□□□□ -0.54
RAB11FIP3-202ENST00000412256 NUAK2Q9H093 628 aa11.65□□□□□ -0.54
RAB11FIP3-202ENST00000412256 TMEM5Q9Y2B1 443 aa11.65□□□□□ -0.54
RAB11FIP3-202ENST00000412256 AP3M1Q9Y2T2 418 aa11.65□□□□□ -0.54
RAB11FIP3-202ENST00000412256 J3QW42 95 aa11.64□□□□□ -0.55
RAB11FIP3-202ENST00000412256 SERPINA1P01009 418 aa11.64□□□□□ -0.55
RAB11FIP3-202ENST00000412256 HLA-DPB1P04440 258 aa11.64□□□□□ -0.55
RAB11FIP3-202ENST00000412256 CRYBA1P05813 215 aa11.64□□□□□ -0.55
RAB11FIP3-202ENST00000412256 IRF2P14316 349 aa11.64□□□□□ -0.55
RAB11FIP3-202ENST00000412256 SELEP16581 610 aa11.64□□□□□ -0.55
RAB11FIP3-202ENST00000412256 FPR3P25089 353 aa11.64□□□□□ -0.55
RAB11FIP3-202ENST00000412256 PMELP40967 661 aa11.64□□□□□ -0.55
RAB11FIP3-202ENST00000412256 PITPNBP48739 271 aa11.64□□□□□ -0.55
RAB11FIP3-202ENST00000412256 MEP1BQ16820 701 aa11.64□□□□□ -0.55
RAB11FIP3-202ENST00000412256 DEFB112Q30KQ8 113 aa11.64□□□□□ -0.55
RAB11FIP3-202ENST00000412256 PDLIM3Q53GG5 364 aaPredicted RBP11.64□□□□□ -0.55
RAB11FIP3-202ENST00000412256 CORO6Q6QEF8 472 aa11.64□□□□□ -0.55
RAB11FIP3-202ENST00000412256 BRD3OSQ6XYD6 125 aa11.64□□□□□ -0.55
RAB11FIP3-202ENST00000412256 C9orf139Q6ZV77 190 aa11.64□□□□□ -0.55
RAB11FIP3-202ENST00000412256 CBLL1Q75N03 491 aa11.64□□□□□ -0.55
RAB11FIP3-202ENST00000412256 SLC15A3Q8IY34 581 aa11.64□□□□□ -0.55
RAB11FIP3-202ENST00000412256 C1orf87Q8N0U7 546 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms