RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 RRP9O43818 475 aaKnown RBP-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 CDC40O60508 579 aaKnown RBP eCLIP-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 PFKFB2O60825 505 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 GABARAPO95166 117 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 FTCDO95954 541 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 IFNA1P01562 189 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 GIMD1P0DJR0 217 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 CCL3P10147 92 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 ALADP13716 330 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 KITLGP21583 273 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 CRYBB3P26998 211 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 PPP2R1AP30153 589 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 AVPR2P30518 371 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 SLC7A1P30825 629 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 NF2P35240 595 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 RORAP35398 523 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 CFHR2P36980 270 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 PBX1P40424 430 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 SKIV2L2P42285 1042 aaKnown RBP-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 NSG1P42857 185 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 RPL27AP46776 148 aaKnown RBP-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 CCR9P51686 369 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 AQP4P55087 323 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 TAS2R19P59542 299 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 TAS2R20P59543 309 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 HTD2P86397 168 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 TGFBR3Q03167 851 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 CEBPZQ03701 1054 aaKnown RBP-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 SLC18A2Q05940 514 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 INCA1Q0VD86 236 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 EDDM3AQ14507 147 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 OPCMLQ14982 345 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 HSPB2Q16082 182 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 BAK1Q16611 211 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 CCDC144BQ3MJ40 725 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 SH2D4BQ5SQS7 431 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 GLYATL3Q5SZD4 288 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 SYT6Q5T7P8 510 aaPredicted RBP-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 GORABQ5T7V8 394 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 COX6B2Q6YFQ2 88 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 ZNF705AQ6ZN79 300 aaPredicted RBP-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 LYZL2Q7Z4W2 148 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 CERS3Q8IU89 383 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 DENND1CQ8IV53 801 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 UBE2DNLQ8IWF7 75 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 TCEANCQ8N8B7 351 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 NKAPP1Q8N9T2 125 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 TMEM229BQ8NBD8 167 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 OR5T1Q8NG75 326 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 AKR7LQ8NHP1 331 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 PFN4Q8NHR9 129 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 NSUN6Q8TEA1 469 aaKnown RBP-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 NRG4Q8WWG1 115 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 LIPHQ8WWY8 451 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 DNAJC19Q96DA6 116 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 SAAL1Q96ER3 474 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 MMABQ96EY8 250 aaPredicted RBP-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 TMEM56Q96MV1 263 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 TGS1Q96RS0 853 aaKnown RBP-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 SLIRPQ9GZT3 109 aaKnown RBP-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 PUS7LQ9H0K6 701 aaKnown RBP-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 NDST4Q9H3R1 872 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 RNF41Q9H4P4 317 aaPredicted RBP-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 C1orf115Q9H7X2 142 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 PLEKHF2Q9H8W4 249 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 NMUR1Q9HB89 426 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 OR2S2Q9NQN1 319 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 FAM207AQ9NSI2 230 aaPredicted RBP-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 RBFOX1Q9NWB1 397 aaKnown RBP-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 TAS2R16Q9NYV7 291 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 CLIC5Q9NZA1 410 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 GRHL1Q9NZI5 618 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 HACD3Q9P035 362 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 SPATA7Q9P0W8 599 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 RWDD2AQ9UIY3 292 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 NAGKQ9UJ70 344 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 FBXW11Q9UKB1 542 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 VPREB3Q9UKI3 123 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 IKBKGQ9Y6K9 419 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 CTTNBP2Q8WZ74 1663 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 ATP8B3O60423 1300 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 KIF7Q2M1P5 1343 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 JCADQ9P266 1359 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 PLEKHH1Q9ULM0 1364 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 IGHV1-69DA0A0B4J2H0 117 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 A0A0J9YW62 118 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 PNMA6EA0A0J9YXQ4 647 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 C13orf42A0A1B0GVH6 325 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 LINC01546A6NGU7 62 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 FAM47DPA6NHR8 397 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 GOLGA6L10A6NI86 522 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 LRRC53A6NM62 1247 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 MCRIP1C9JLW8 97 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 HIP1O00291 1037 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 RANBP6O60518 1105 aaKnown RBP-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 PDE8AO60658 829 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 FMO6PO60774 539 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 OR7C1O76099 320 aaPredicted RBP-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 ANP32DO95626 131 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 LALBAP00709 142 aa-2.2□□□□□ -2.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms