RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 NMD3Q96D46 503 aaKnown RBP1.94□□□□□ -2.1
RNU4-53P-201ENST00000410828 RCC1LQ96I51 464 aaKnown RBP1.94□□□□□ -2.1
RNU4-53P-201ENST00000410828 TEX37Q96LM6 180 aa1.94□□□□□ -2.1
RNU4-53P-201ENST00000410828 DMRTB1Q96MA1 342 aa1.94□□□□□ -2.1
RNU4-53P-201ENST00000410828 ZBTB18Q99592 522 aa1.94□□□□□ -2.1
RNU4-53P-201ENST00000410828 SSX3Q99909 188 aa1.94□□□□□ -2.1
RNU4-53P-201ENST00000410828 CITED2Q99967 270 aaPredicted RBP1.94□□□□□ -2.1
RNU4-53P-201ENST00000410828 CPPED1Q9BRF8 314 aaPredicted RBP1.94□□□□□ -2.1
RNU4-53P-201ENST00000410828 WACQ9BTA9 647 aa1.94□□□□□ -2.1
RNU4-53P-201ENST00000410828 GPR61Q9BZJ8 451 aa1.94□□□□□ -2.1
RNU4-53P-201ENST00000410828 WNT5BQ9H1J7 359 aa1.94□□□□□ -2.1
RNU4-53P-201ENST00000410828 SEMA6AQ9H2E6 1030 aa1.94□□□□□ -2.1
RNU4-53P-201ENST00000410828 RAD21L1Q9H4I0 556 aa1.94□□□□□ -2.1
RNU4-53P-201ENST00000410828 RMND5AQ9H871 391 aa1.94□□□□□ -2.1
RNU4-53P-201ENST00000410828 EVA1AQ9H8M9 152 aa1.94□□□□□ -2.1
RNU4-53P-201ENST00000410828 PPCSQ9HAB8 311 aa1.94□□□□□ -2.1
RNU4-53P-201ENST00000410828 SLCO1B3Q9NPD5 702 aa1.94□□□□□ -2.1
RNU4-53P-201ENST00000410828 TRIM36Q9NQ86 728 aa1.94□□□□□ -2.1
RNU4-53P-201ENST00000410828 SIRT7Q9NRC8 400 aa1.94□□□□□ -2.1
RNU4-53P-201ENST00000410828 INIPQ9NRY2 104 aa1.94□□□□□ -2.1
RNU4-53P-201ENST00000410828 SERTAD4Q9NUC0 356 aa1.94□□□□□ -2.1
RNU4-53P-201ENST00000410828 TMEM100Q9NV29 134 aa1.94□□□□□ -2.1
RNU4-53P-201ENST00000410828 ONECUT1Q9UBC0 465 aa1.94□□□□□ -2.1
RNU4-53P-201ENST00000410828 RNF7Q9UBF6 113 aa1.94□□□□□ -2.1
RNU4-53P-201ENST00000410828 CTSZQ9UBR2 303 aa1.94□□□□□ -2.1
RNU4-53P-201ENST00000410828 NKX1-2Q9UD57 310 aaPredicted RBP1.94□□□□□ -2.1
RNU4-53P-201ENST00000410828 ZMAT5Q9UDW3 170 aaKnown RBP1.94□□□□□ -2.1
RNU4-53P-201ENST00000410828 ZNF229Q9UJW7 825 aa1.94□□□□□ -2.1
RNU4-53P-201ENST00000410828 SLC13A4Q9UKG4 626 aa1.94□□□□□ -2.1
RNU4-53P-201ENST00000410828 TMCC3Q9ULS5 477 aa1.94□□□□□ -2.1
RNU4-53P-201ENST00000410828 STARD10Q9Y365 291 aa1.94□□□□□ -2.1
RNU4-53P-201ENST00000410828 NOP16Q9Y3C1 178 aaKnown RBP1.94□□□□□ -2.1
RNU4-53P-201ENST00000410828 UGT2A1Q9Y4X1 527 aa1.94□□□□□ -2.1
RNU4-53P-201ENST00000410828 HYDINQ4G0P3 5121 aa1.94□□□□□ -2.1
RNU4-53P-201ENST00000410828 DYNC2H1Q8NCM8 4307 aaKnown RBP1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 SORL1Q92673 2214 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 IGKV1D-43A0A0B4J1Z2 117 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 A0A1W2PPL8 197 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 A0A1W2PRD5 423 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 A0A1W2PRF3 423 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 A0A1W2PRM7 423 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 A0A1W2PRX2 142 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 MEIOCA2RUB1 952 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 WDR91A4D1P6 747 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 TRAPPC13A5PLN9 417 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 OR6C6A6NF89 314 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 OOEPA6NGQ2 149 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 NPIPB13A6NJU9 1138 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 SMIM23A6NLE4 172 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 ADARB2-AS1A8MUL3 147 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 IQCF6A8MYZ5 107 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 NPIPB4C9JG80 1138 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 CLIC1O00299 241 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 KPNA4O00629 521 aaPredicted RBP1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 POLR3GO15318 223 aaPredicted RBP1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 MLNRO43193 412 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 CHP2O43745 196 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 ANGPTL7O43827 346 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 DOK2O60496 412 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 TPST1O60507 370 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 TPST2O60704 377 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 FAM20BO75063 409 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 GYPAP02724 150 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 MT-ND1P03886 318 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 HLA-DPB1P04440 258 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 IFNW1P05000 195 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 ALDOBP05062 364 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 ASAH2BP0C7U1 165 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 BMP2P12643 396 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 LYL1P12980 280 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 IDO1P14902 403 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 ZNF26P17031 533 aaPredicted RBP1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 FUT1P19526 365 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 PAICSP22234 425 aaKnown RBP1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 IL12AP29459 219 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 HOXD3P31249 432 aaPredicted RBP1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 SAA4P35542 130 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 CD200P41217 278 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 ERFP50548 548 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 RPL14P50914 215 aaKnown RBP1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 UBE2E1P51965 193 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 RAD23AP54725 363 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 UGT2B15P54855 530 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 NME5P56597 212 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 KRTAP10-11P60412 298 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 CDK6Q00534 326 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 CD83Q01151 205 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 RPL18Q07020 188 aaKnown RBP1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 FADDQ13158 208 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 MAB21L1Q13394 359 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 BLMHQ13867 455 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 ENDOGQ14249 297 aaKnown RBP1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 OR8B8Q15620 311 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 NPTX1Q15818 432 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 MICBQ29980 383 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 LRRC75BQ2VPJ9 315 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 GTDC1Q4AE62 458 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 ARSJQ5FYB0 599 aaPredicted RBP1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 CLEC12AQ5QGZ9 265 aa1.93□□□□□ -2.1
RNU4-53P-201ENST00000410828 C6orf10Q5SRN2 563 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms