RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 ZNF593O00488 134 aaPredicted RBP9.36□□□□□ -0.91
CHMP3-205ENST00000409810 MITFO75030 526 aaPredicted RBP9.36□□□□□ -0.91
CHMP3-205ENST00000409810 NDUFS7O75251 213 aa9.36□□□□□ -0.91
CHMP3-205ENST00000409810 F12P00748 615 aaPredicted RBP9.36□□□□□ -0.91
CHMP3-205ENST00000409810 ADRA2AP08913 450 aa9.36□□□□□ -0.91
CHMP3-205ENST00000409810 FOSL1P15407 271 aa9.36□□□□□ -0.91
CHMP3-205ENST00000409810 GSTT1P30711 240 aa9.36□□□□□ -0.91
CHMP3-205ENST00000409810 LIPAP38571 399 aa9.36□□□□□ -0.91
CHMP3-205ENST00000409810 RAD23AP54725 363 aa9.36□□□□□ -0.91
CHMP3-205ENST00000409810 ERVS71-1P61550 626 aa9.36□□□□□ -0.91
CHMP3-205ENST00000409810 TAF13Q15543 124 aa9.36□□□□□ -0.91
CHMP3-205ENST00000409810 PCK2Q16822 640 aa9.36□□□□□ -0.91
CHMP3-205ENST00000409810 MSMPQ1L6U9 139 aa9.36□□□□□ -0.91
CHMP3-205ENST00000409810 ZMAT1Q5H9K5 638 aa9.36□□□□□ -0.91
CHMP3-205ENST00000409810 SPATA46Q5T0L3 261 aa9.36□□□□□ -0.91
CHMP3-205ENST00000409810 MBNL2Q5VZF2 373 aaKnown RBP9.36□□□□□ -0.91
CHMP3-205ENST00000409810 TMEM154Q6P9G4 183 aa9.36□□□□□ -0.91
CHMP3-205ENST00000409810 CFAP77Q6ZQR2 320 aa9.36□□□□□ -0.91
CHMP3-205ENST00000409810 ERI1Q8IV48 349 aaKnown RBP9.36□□□□□ -0.91
CHMP3-205ENST00000409810 CPOQ8IVL8 374 aa9.36□□□□□ -0.91
CHMP3-205ENST00000409810 PQLC1Q8N2U9 271 aa9.36□□□□□ -0.91
CHMP3-205ENST00000409810 ZNF511Q8NB15 262 aa9.36□□□□□ -0.91
CHMP3-205ENST00000409810 PTP4A1Q93096 173 aa9.36□□□□□ -0.91
CHMP3-205ENST00000409810 APOBEC3DQ96AK3 386 aaPredicted RBP9.36□□□□□ -0.91
CHMP3-205ENST00000409810 MARS2Q96GW9 593 aaKnown RBP9.36□□□□□ -0.91
CHMP3-205ENST00000409810 RHNO1Q9BSD3 238 aa9.36□□□□□ -0.91
CHMP3-205ENST00000409810 C9orf16Q9BUW7 83 aa9.36□□□□□ -0.91
CHMP3-205ENST00000409810 TMUB1Q9BVT8 246 aa9.36□□□□□ -0.91
CHMP3-205ENST00000409810 GABARAPL3Q9BY60 117 aa9.36□□□□□ -0.91
CHMP3-205ENST00000409810 OR2J1Q9GZK6 312 aa9.36□□□□□ -0.91
CHMP3-205ENST00000409810 MED20Q9H944 212 aa9.36□□□□□ -0.91
CHMP3-205ENST00000409810 WDR76Q9H967 626 aa9.36□□□□□ -0.91
CHMP3-205ENST00000409810 HINT3Q9NQE9 182 aaKnown RBP9.36□□□□□ -0.91
CHMP3-205ENST00000409810 H2AFY2Q9P0M6 372 aaPredicted RBP9.36□□□□□ -0.91
CHMP3-205ENST00000409810 TAAR3PQ9P1P4 343 aa9.36□□□□□ -0.91
CHMP3-205ENST00000409810 HIVEP1P15822 2718 aa9.36□□□□□ -0.91
CHMP3-205ENST00000409810 PLSCR5A0PG75 271 aa9.35□□□□□ -0.91
CHMP3-205ENST00000409810 ZNF878C9JN71 531 aa9.35□□□□□ -0.91
CHMP3-205ENST00000409810 F5H5K5 113 aa9.35□□□□□ -0.91
CHMP3-205ENST00000409810 EI24O14681 340 aa9.35□□□□□ -0.91
CHMP3-205ENST00000409810 IGHV3-13P01766 116 aa9.35□□□□□ -0.91
CHMP3-205ENST00000409810 ALDH3B1P43353 468 aa9.35□□□□□ -0.91
CHMP3-205ENST00000409810 SLC15A1P46059 708 aa9.35□□□□□ -0.91
CHMP3-205ENST00000409810 PDLIM4P50479 330 aa9.35□□□□□ -0.91
CHMP3-205ENST00000409810 ALDH3A2P51648 485 aa9.35□□□□□ -0.91
CHMP3-205ENST00000409810 TPTEP56180 551 aa9.35□□□□□ -0.91
CHMP3-205ENST00000409810 GRB2P62993 217 aaKnown RBP9.35□□□□□ -0.91
CHMP3-205ENST00000409810 DBPQ10586 325 aaPredicted RBP9.35□□□□□ -0.91
CHMP3-205ENST00000409810 SLX4IPQ5VYV7 408 aa9.35□□□□□ -0.91
CHMP3-205ENST00000409810 LYPD4Q6UWN0 246 aa9.35□□□□□ -0.91
CHMP3-205ENST00000409810 DCXRQ7Z4W1 244 aa9.35□□□□□ -0.91
CHMP3-205ENST00000409810 LRP11Q86VZ4 500 aa9.35□□□□□ -0.91
CHMP3-205ENST00000409810 ZNF454Q8N9F8 522 aa9.35□□□□□ -0.91
CHMP3-205ENST00000409810 KLF14Q8TD94 323 aaPredicted RBP9.35□□□□□ -0.91
CHMP3-205ENST00000409810 ZNRF4Q8WWF5 429 aa9.35□□□□□ -0.91
CHMP3-205ENST00000409810 SLC7A6Q92536 515 aa9.35□□□□□ -0.91
CHMP3-205ENST00000409810 FAM168AQ92567 244 aa9.35□□□□□ -0.91
CHMP3-205ENST00000409810 ZMYND19Q96E35 227 aaPredicted RBP9.35□□□□□ -0.91
CHMP3-205ENST00000409810 MAP6Q96JE9 813 aa9.35□□□□□ -0.91
CHMP3-205ENST00000409810 COPS4Q9BT78 406 aa9.35□□□□□ -0.91
CHMP3-205ENST00000409810 HCAR1Q9BXC0 346 aa9.35□□□□□ -0.91
CHMP3-205ENST00000409810 TPK1Q9H3S4 243 aa9.35□□□□□ -0.91
CHMP3-205ENST00000409810 RIBC2Q9H4K1 309 aa9.35□□□□□ -0.91
CHMP3-205ENST00000409810 MARCH7Q9H992 704 aa9.35□□□□□ -0.91
CHMP3-205ENST00000409810 PNRC2Q9NPJ4 139 aaKnown RBP9.35□□□□□ -0.91
CHMP3-205ENST00000409810 CYSLTR2Q9NS75 346 aa9.35□□□□□ -0.91
CHMP3-205ENST00000409810 DDX28Q9NUL7 540 aaKnown RBP9.35□□□□□ -0.91
CHMP3-205ENST00000409810 USE1Q9NZ43 259 aa9.35□□□□□ -0.91
CHMP3-205ENST00000409810 TMEFF2Q9UIK5 374 aaPredicted RBP9.35□□□□□ -0.91
CHMP3-205ENST00000409810 ACANP16112 2415 aa9.35□□□□□ -0.91
CHMP3-205ENST00000409810 TRIM64A6NGJ6 449 aa9.34□□□□□ -0.91
CHMP3-205ENST00000409810 TRIM64BA6NI03 449 aa9.34□□□□□ -0.91
CHMP3-205ENST00000409810 H7C1Q1 480 aa9.34□□□□□ -0.91
CHMP3-205ENST00000409810 M0R135 149 aa9.34□□□□□ -0.91
CHMP3-205ENST00000409810 NDUFS8O00217 210 aa9.34□□□□□ -0.91
CHMP3-205ENST00000409810 PRKYO43930 277 aa9.34□□□□□ -0.91
CHMP3-205ENST00000409810 TIMM8AO60220 97 aaPredicted RBP9.34□□□□□ -0.91
CHMP3-205ENST00000409810 BAG2O95816 211 aa9.34□□□□□ -0.91
CHMP3-205ENST00000409810 CLPTM1O96005 669 aa9.34□□□□□ -0.91
CHMP3-205ENST00000409810 NGFP01138 241 aa9.34□□□□□ -0.91
CHMP3-205ENST00000409810 APOC1P02654 83 aa9.34□□□□□ -0.91
CHMP3-205ENST00000409810 ALPLP05186 524 aa9.34□□□□□ -0.91
CHMP3-205ENST00000409810 DBHP09172 617 aa9.34□□□□□ -0.91
CHMP3-205ENST00000409810 ACSM4P0C7M7 580 aa9.34□□□□□ -0.91
CHMP3-205ENST00000409810 SLC25A16P16260 332 aa9.34□□□□□ -0.91
CHMP3-205ENST00000409810 HSD11B1P28845 292 aa9.34□□□□□ -0.91
CHMP3-205ENST00000409810 RPS27P42677 84 aaKnown RBP9.34□□□□□ -0.91
CHMP3-205ENST00000409810 SLC6A9P48067 706 aa9.34□□□□□ -0.91
CHMP3-205ENST00000409810 CDC42P60953 191 aa9.34□□□□□ -0.91
CHMP3-205ENST00000409810 MALLQ13021 153 aa9.34□□□□□ -0.91
CHMP3-205ENST00000409810 APOFQ13790 326 aa9.34□□□□□ -0.91
CHMP3-205ENST00000409810 EIF2B1Q14232 305 aaKnown RBP9.34□□□□□ -0.91
CHMP3-205ENST00000409810 MAD2L1BPQ15013 274 aaPredicted RBP9.34□□□□□ -0.91
CHMP3-205ENST00000409810 PCGF3Q3KNV8 242 aa9.34□□□□□ -0.91
CHMP3-205ENST00000409810 KRTAP27-1Q3LI81 207 aa9.34□□□□□ -0.91
CHMP3-205ENST00000409810 NXNL2Q5VZ03 156 aa9.34□□□□□ -0.91
CHMP3-205ENST00000409810 C12orf73Q69YU5 71 aa9.34□□□□□ -0.91
CHMP3-205ENST00000409810 DPY19L4Q7Z388 723 aa9.34□□□□□ -0.91
CHMP3-205ENST00000409810 LURAP1LQ8IV03 231 aa9.34□□□□□ -0.91
CHMP3-205ENST00000409810 GID4Q8IVV7 300 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms