RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 HSPB3Q12988 150 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 SSPNQ14714 243 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 JOSD1Q15040 202 aaPredicted RBP9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 ELOCQ15369 112 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 SURF2Q15527 256 aaPredicted RBP9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 EIPR1Q53HC9 387 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 BEX5Q5H9J7 111 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 LYSMD4Q5XG99 296 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 SLC22A25Q6T423 547 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 UBE3DQ7Z6J8 389 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 MEX3DQ86XN8 651 aaKnown RBP9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 FAM129CQ86XR2 697 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 SLC35F2Q8IXU6 374 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 FAM24BQ8N5W8 94 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 ACBD4Q8NC06 268 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 OR2L5Q8NG80 312 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 OR4E2Q8NGC2 313 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 OR10D4PQ8NGN7 298 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 ST7LQ8TDW4 575 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 ZNF480Q8WV37 535 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 TMEM159Q96B96 161 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 AKR1E2Q96JD6 320 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 F2RL3Q96RI0 385 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 PRSS16Q9NQE7 514 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 SIRT7Q9NRC8 400 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 ZCCHC3Q9NUD5 404 aaKnown RBP9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 VSX1Q9NZR4 365 aaPredicted RBP9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 SERGEFQ9UGK8 458 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 KCNG2Q9UJ96 466 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 USP24Q9UPU5 2620 aa9.58□□□□□ -0.88
NIF3L1-204ENST00000409357 CABIN1Q9Y6J0 2220 aa9.57□□□□□ -0.88
NIF3L1-204ENST00000409357 PLXNA2O75051 1894 aa9.57□□□□□ -0.88
NIF3L1-204ENST00000409357 ZC3H12DA2A288 527 aaKnown RBP9.57□□□□□ -0.88
NIF3L1-204ENST00000409357 PLPP1O14494 284 aa9.57□□□□□ -0.88
NIF3L1-204ENST00000409357 CST4P01036 141 aa9.57□□□□□ -0.88
NIF3L1-204ENST00000409357 HLA-AP01891 365 aaKnown RBP9.57□□□□□ -0.88
NIF3L1-204ENST00000409357 F13BP05160 661 aa9.57□□□□□ -0.88
NIF3L1-204ENST00000409357 SNRNP70P08621 437 aaKnown RBP9.57□□□□□ -0.88
NIF3L1-204ENST00000409357 TACSTD2P09758 323 aa9.57□□□□□ -0.88
NIF3L1-204ENST00000409357 PET100P0DJ07 73 aa9.57□□□□□ -0.88
NIF3L1-204ENST00000409357 RD3LP0DJH9 198 aa9.57□□□□□ -0.88
NIF3L1-204ENST00000409357 ADRA2CP18825 462 aa9.57□□□□□ -0.88
NIF3L1-204ENST00000409357 GABRR1P24046 479 aa9.57□□□□□ -0.88
NIF3L1-204ENST00000409357 SNCAP37840 140 aa9.57□□□□□ -0.88
NIF3L1-204ENST00000409357 NR0B2Q15466 257 aa9.57□□□□□ -0.88
NIF3L1-204ENST00000409357 AMZ1Q400G9 498 aa9.57□□□□□ -0.88
NIF3L1-204ENST00000409357 TRIM61Q5EBN2 209 aa9.57□□□□□ -0.88
NIF3L1-204ENST00000409357 THEM4Q5T1C6 240 aa9.57□□□□□ -0.88
NIF3L1-204ENST00000409357 TMEM268Q5VZI3 342 aa9.57□□□□□ -0.88
NIF3L1-204ENST00000409357 FAM166AQ6J272 317 aa9.57□□□□□ -0.88
NIF3L1-204ENST00000409357 BIVMQ86UB2 503 aa9.57□□□□□ -0.88
NIF3L1-204ENST00000409357 VRK2Q86Y07 508 aa9.57□□□□□ -0.88
NIF3L1-204ENST00000409357 ZNF433Q8N7K0 673 aaPredicted RBP9.57□□□□□ -0.88
NIF3L1-204ENST00000409357 OR7G2Q8NG99 324 aa9.57□□□□□ -0.88
NIF3L1-204ENST00000409357 OR13C8Q8NGS7 320 aa9.57□□□□□ -0.88
NIF3L1-204ENST00000409357 NUBPLQ8TB37 319 aa9.57□□□□□ -0.88
NIF3L1-204ENST00000409357 TMEM255BQ8WV15 326 aa9.57□□□□□ -0.88
NIF3L1-204ENST00000409357 MAFIPQ8WZ33 124 aa9.57□□□□□ -0.88
NIF3L1-204ENST00000409357 PTX4Q96A99 478 aa9.57□□□□□ -0.88
NIF3L1-204ENST00000409357 MUCL1Q96DR8 90 aa9.57□□□□□ -0.88
NIF3L1-204ENST00000409357 SEH1LQ96EE3 360 aa9.57□□□□□ -0.88
NIF3L1-204ENST00000409357 PTCHD1Q96NR3 888 aa9.57□□□□□ -0.88
NIF3L1-204ENST00000409357 PRAP1Q96NZ9 151 aa9.57□□□□□ -0.88
NIF3L1-204ENST00000409357 MS4A8Q9BY19 250 aa9.57□□□□□ -0.88
NIF3L1-204ENST00000409357 SLC5A7Q9GZV3 580 aa9.57□□□□□ -0.88
NIF3L1-204ENST00000409357 OR51V1Q9H2C8 321 aa9.57□□□□□ -0.88
NIF3L1-204ENST00000409357 GLIPR2Q9H4G4 154 aa9.57□□□□□ -0.88
NIF3L1-204ENST00000409357 FKRPQ9H9S5 495 aa9.57□□□□□ -0.88
NIF3L1-204ENST00000409357 PELI2Q9HAT8 420 aa9.57□□□□□ -0.88
NIF3L1-204ENST00000409357 RAB18Q9NP72 206 aa9.57□□□□□ -0.88
NIF3L1-204ENST00000409357 PILRBQ9UKJ0 227 aa9.57□□□□□ -0.88
NIF3L1-204ENST00000409357 WASF3Q9UPY6 502 aa9.57□□□□□ -0.88
NIF3L1-204ENST00000409357 PRKAB1Q9Y478 270 aa9.57□□□□□ -0.88
NIF3L1-204ENST00000409357 CSAG2Q9Y5P2 127 aa9.57□□□□□ -0.88
NIF3L1-204ENST00000409357 LOC100289279A0A1B0GTE1 492 aa9.56□□□□□ -0.88
NIF3L1-204ENST00000409357 NPIPB15A6NHN6 443 aaPredicted RBP9.56□□□□□ -0.88
NIF3L1-204ENST00000409357 M0QZK8 103 aa9.56□□□□□ -0.88
NIF3L1-204ENST00000409357 OR1F1O43749 312 aa9.56□□□□□ -0.88
NIF3L1-204ENST00000409357 GGCTO75223 188 aaKnown RBP9.56□□□□□ -0.88
NIF3L1-204ENST00000409357 ZNF217O75362 1048 aa9.56□□□□□ -0.88
NIF3L1-204ENST00000409357 LYPD3O95274 346 aa9.56□□□□□ -0.88
NIF3L1-204ENST00000409357 C1orf105O95561 183 aa9.56□□□□□ -0.88
NIF3L1-204ENST00000409357 PTHLHP12272 177 aa9.56□□□□□ -0.88
NIF3L1-204ENST00000409357 NME2P22392 152 aa9.56□□□□□ -0.88
NIF3L1-204ENST00000409357 SLC6A6P31641 620 aa9.56□□□□□ -0.88
NIF3L1-204ENST00000409357 METAP1P53582 386 aa9.56□□□□□ -0.88
NIF3L1-204ENST00000409357 OR8G1Q15617 311 aa9.56□□□□□ -0.88
NIF3L1-204ENST00000409357 TOMM34Q15785 309 aaPredicted RBP9.56□□□□□ -0.88
NIF3L1-204ENST00000409357 HAGHQ16775 308 aa9.56□□□□□ -0.88
NIF3L1-204ENST00000409357 MOGAT2Q3SYC2 334 aa9.56□□□□□ -0.88
NIF3L1-204ENST00000409357 STPG1Q5TH74 334 aa9.56□□□□□ -0.88
NIF3L1-204ENST00000409357 ZNF585AQ6P3V2 769 aa9.56□□□□□ -0.88
NIF3L1-204ENST00000409357 BRICD5Q6PL45 260 aa9.56□□□□□ -0.88
NIF3L1-204ENST00000409357 RANBP3LQ86VV4 465 aaPredicted RBP9.56□□□□□ -0.88
NIF3L1-204ENST00000409357 PRR18Q8N4B5 295 aa9.56□□□□□ -0.88
NIF3L1-204ENST00000409357 ZSCAN4Q8NAM6 433 aaPredicted RBP9.56□□□□□ -0.88
NIF3L1-204ENST00000409357 OR2I1PQ8NGU4 316 aa9.56□□□□□ -0.88
NIF3L1-204ENST00000409357 RGP1Q92546 391 aaPredicted RBP9.56□□□□□ -0.88
NIF3L1-204ENST00000409357 DCUN1D4Q92564 292 aa9.56□□□□□ -0.88
NIF3L1-204ENST00000409357 CPNE2Q96FN4 548 aaPredicted RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms