RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 NKAIN4Q8IVV8 208 aa13.8□□□□□ -0.2
CHMP3-203ENST00000409225 C11orf65Q8NCR3 313 aa13.8□□□□□ -0.2
CHMP3-203ENST00000409225 TMEM255BQ8WV15 326 aa13.8□□□□□ -0.2
CHMP3-203ENST00000409225 LRTOMTQ8WZ04 291 aa13.8□□□□□ -0.2
CHMP3-203ENST00000409225 ZBTB9Q96C00 473 aa13.8□□□□□ -0.2
CHMP3-203ENST00000409225 SPDL1Q96EA4 605 aa13.8□□□□□ -0.2
CHMP3-203ENST00000409225 COG8Q96MW5 612 aa13.8□□□□□ -0.2
CHMP3-203ENST00000409225 POLE4Q9NR33 117 aa13.8□□□□□ -0.2
CHMP3-203ENST00000409225 TMCC3Q9ULS5 477 aa13.8□□□□□ -0.2
CHMP3-203ENST00000409225 GMEB1Q9Y692 573 aa13.8□□□□□ -0.2
CHMP3-203ENST00000409225 TSPAN19P0C672 248 aa13.79□□□□□ -0.2
CHMP3-203ENST00000409225 VSIG8P0DPA2 414 aa13.79□□□□□ -0.2
CHMP3-203ENST00000409225 PSMB10P40306 273 aa13.79□□□□□ -0.2
CHMP3-203ENST00000409225 RPL27P61353 136 aaKnown RBP13.79□□□□□ -0.2
CHMP3-203ENST00000409225 VSNL1P62760 191 aa13.79□□□□□ -0.2
CHMP3-203ENST00000409225 SCRN3Q0VDG4 424 aa13.79□□□□□ -0.2
CHMP3-203ENST00000409225 ALG10Q5BKT4 473 aa13.79□□□□□ -0.2
CHMP3-203ENST00000409225 VAX1Q5SQQ9 334 aa13.79□□□□□ -0.2
CHMP3-203ENST00000409225 BLOC1S3Q6QNY0 202 aa13.79□□□□□ -0.2
CHMP3-203ENST00000409225 Q6ZTK2 550 aa13.79□□□□□ -0.2
CHMP3-203ENST00000409225 IGFN1Q86VF2 1251 aa13.79□□□□□ -0.2
CHMP3-203ENST00000409225 FUNDC1Q8IVP5 155 aa13.79□□□□□ -0.2
CHMP3-203ENST00000409225 BHLHE23Q8NDY6 225 aa13.79□□□□□ -0.2
CHMP3-203ENST00000409225 ZNF582Q96NG8 517 aaPredicted RBP13.79□□□□□ -0.2
CHMP3-203ENST00000409225 CPPED1Q9BRF8 314 aaPredicted RBP13.79□□□□□ -0.2
CHMP3-203ENST00000409225 PCDHAC1Q9H158 963 aa13.79□□□□□ -0.2
CHMP3-203ENST00000409225 CENPHQ9H3R5 247 aa13.79□□□□□ -0.2
CHMP3-203ENST00000409225 CTSZQ9UBR2 303 aa13.79□□□□□ -0.2
CHMP3-203ENST00000409225 TSPAN9O75954 239 aa13.78□□□□□ -0.2
CHMP3-203ENST00000409225 LIPFP07098 398 aa13.78□□□□□ -0.2
CHMP3-203ENST00000409225 FUT4P22083 530 aa13.78□□□□□ -0.2
CHMP3-203ENST00000409225 NPY4RP50391 375 aa13.78□□□□□ -0.2
CHMP3-203ENST00000409225 HOXA4Q00056 320 aaPredicted RBP13.78□□□□□ -0.2
CHMP3-203ENST00000409225 DBPQ10586 325 aaPredicted RBP13.78□□□□□ -0.2
CHMP3-203ENST00000409225 CYP51A1Q16850 503 aa13.78□□□□□ -0.2
CHMP3-203ENST00000409225 FNDC8Q8TC99 324 aa13.78□□□□□ -0.2
CHMP3-203ENST00000409225 PPP1R14AQ96A00 147 aa13.78□□□□□ -0.2
CHMP3-203ENST00000409225 SIRPDQ9H106 197 aa13.78□□□□□ -0.2
CHMP3-203ENST00000409225 CCDC167Q9P0B6 97 aa13.78□□□□□ -0.2
CHMP3-203ENST00000409225 ERVK-18Q9QC07 812 aa13.78□□□□□ -0.2
CHMP3-203ENST00000409225 FAM96BQ9Y3D0 163 aa13.78□□□□□ -0.2
CHMP3-203ENST00000409225 BTBD17A6NE02 478 aa13.77□□□□□ -0.21
CHMP3-203ENST00000409225 H7C1C5 153 aa13.77□□□□□ -0.21
CHMP3-203ENST00000409225 HLA-DPB1P04440 258 aa13.77□□□□□ -0.21
CHMP3-203ENST00000409225 RBM34P42696 430 aaKnown RBP13.77□□□□□ -0.21
CHMP3-203ENST00000409225 CTXN1P60606 82 aa13.77□□□□□ -0.21
CHMP3-203ENST00000409225 ARF6P62330 175 aa13.77□□□□□ -0.21
CHMP3-203ENST00000409225 LCN6P62502 163 aa13.77□□□□□ -0.21
CHMP3-203ENST00000409225 HERPUD1Q15011 391 aa13.77□□□□□ -0.21
CHMP3-203ENST00000409225 FBXW12Q6X9E4 464 aa13.77□□□□□ -0.21
CHMP3-203ENST00000409225 C11orf44Q8N8P7 122 aa13.77□□□□□ -0.21
CHMP3-203ENST00000409225 PNLDC1Q8NA58 520 aaKnown RBP13.77□□□□□ -0.21
CHMP3-203ENST00000409225 OR11L1Q8NGX0 322 aa13.77□□□□□ -0.21
CHMP3-203ENST00000409225 SLC26A7Q8TE54 656 aa13.77□□□□□ -0.21
CHMP3-203ENST00000409225 TMEM239Q8WW34 195 aa13.77□□□□□ -0.21
CHMP3-203ENST00000409225 LIPHQ8WWY8 451 aa13.77□□□□□ -0.21
CHMP3-203ENST00000409225 TAMM41Q96BW9 452 aa13.77□□□□□ -0.21
CHMP3-203ENST00000409225 SEMA6AQ9H2E6 1030 aa13.77□□□□□ -0.21
CHMP3-203ENST00000409225 UFSP2Q9NUQ7 469 aa13.77□□□□□ -0.21
CHMP3-203ENST00000409225 AURKAIP1Q9NWT8 199 aaPredicted RBP13.77□□□□□ -0.21
CHMP3-203ENST00000409225 VPREB3Q9UKI3 123 aa13.77□□□□□ -0.21
CHMP3-203ENST00000409225 ELOVL7A1L3X0 281 aa13.76□□□□□ -0.21
CHMP3-203ENST00000409225 GPR37O15354 613 aa13.76□□□□□ -0.21
CHMP3-203ENST00000409225 FAM20BO75063 409 aa13.76□□□□□ -0.21
CHMP3-203ENST00000409225 DBHP09172 617 aa13.76□□□□□ -0.21
CHMP3-203ENST00000409225 FPR3P25089 353 aa13.76□□□□□ -0.21
CHMP3-203ENST00000409225 WDR4P57081 412 aaKnown RBP13.76□□□□□ -0.21
CHMP3-203ENST00000409225 TAS2R41P59536 307 aa13.76□□□□□ -0.21
CHMP3-203ENST00000409225 COX10Q12887 443 aa13.76□□□□□ -0.21
CHMP3-203ENST00000409225 OXLD1Q5BKU9 147 aa13.76□□□□□ -0.21
CHMP3-203ENST00000409225 PRAMEF6Q5VXH4 476 aa13.76□□□□□ -0.21
CHMP3-203ENST00000409225 OTPQ5XKR4 325 aa13.76□□□□□ -0.21
CHMP3-203ENST00000409225 SFRP4Q6FHJ7 346 aaPredicted RBP13.76□□□□□ -0.21
CHMP3-203ENST00000409225 BOLLQ8N9W6 283 aaKnown RBP13.76□□□□□ -0.21
CHMP3-203ENST00000409225 AENQ8WTP8 325 aaKnown RBP13.76□□□□□ -0.21
CHMP3-203ENST00000409225 SGCDQ92629 289 aa13.76□□□□□ -0.21
CHMP3-203ENST00000409225 RASD2Q96D21 266 aa13.76□□□□□ -0.21
CHMP3-203ENST00000409225 WACQ9BTA9 647 aa13.76□□□□□ -0.21
CHMP3-203ENST00000409225 RASSF4Q9H2L5 321 aa13.76□□□□□ -0.21
CHMP3-203ENST00000409225 TOR3AQ9H497 397 aa13.76□□□□□ -0.21
CHMP3-203ENST00000409225 SMURF1Q9HCE7 757 aa13.76□□□□□ -0.21
CHMP3-203ENST00000409225 TMEM100Q9NV29 134 aa13.76□□□□□ -0.21
CHMP3-203ENST00000409225 HIF3AQ9Y2N7 669 aa13.76□□□□□ -0.21
CHMP3-203ENST00000409225 FBP2O00757 339 aa13.75□□□□□ -0.21
CHMP3-203ENST00000409225 ADAM20O43506 726 aa13.75□□□□□ -0.21
CHMP3-203ENST00000409225 IGF2P01344 180 aa13.75□□□□□ -0.21
CHMP3-203ENST00000409225 GABRA5P31644 462 aa13.75□□□□□ -0.21
CHMP3-203ENST00000409225 TGFBR2P37173 567 aa13.75□□□□□ -0.21
CHMP3-203ENST00000409225 GATA4P43694 442 aa13.75□□□□□ -0.21
CHMP3-203ENST00000409225 MRPL19P49406 292 aaKnown RBP13.75□□□□□ -0.21
CHMP3-203ENST00000409225 RGS6P49758 472 aa13.75□□□□□ -0.21
CHMP3-203ENST00000409225 PRSS12P56730 875 aa13.75□□□□□ -0.21
CHMP3-203ENST00000409225 SELPLGQ14242 412 aa13.75□□□□□ -0.21
CHMP3-203ENST00000409225 CLEC12AQ5QGZ9 265 aa13.75□□□□□ -0.21
CHMP3-203ENST00000409225 SLC35E4Q6ICL7 350 aa13.75□□□□□ -0.21
CHMP3-203ENST00000409225 PATL1Q86TB9 770 aaKnown RBP13.75□□□□□ -0.21
CHMP3-203ENST00000409225 PCYOX1LQ8NBM8 494 aa13.75□□□□□ -0.21
CHMP3-203ENST00000409225 OR5L1Q8NGL2 311 aa13.75□□□□□ -0.21
CHMP3-203ENST00000409225 OR1F12Q8NHA8 337 aa13.75□□□□□ -0.21
CHMP3-203ENST00000409225 Q8TCH9 128 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms