RNA–Protein interactions for RNA: ENST00000405805.5

HMGB1-206, Transcript of high mobility group box 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HMGB1, Length 4,199 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1-206ENST00000405805 C16orf52Q8NHV5 167 aa10.82□□□□□ -0.68
HMGB1-206ENST00000405805 GPR119Q8TDV5 335 aa10.82□□□□□ -0.68
HMGB1-206ENST00000405805 ZC3HAV1LQ96H79 300 aaKnown RBP10.82□□□□□ -0.68
HMGB1-206ENST00000405805 MOGAT1Q96PD6 335 aa10.82□□□□□ -0.68
HMGB1-206ENST00000405805 TXN2Q99757 166 aa10.82□□□□□ -0.68
HMGB1-206ENST00000405805 PRSS27Q9BQR3 290 aa10.82□□□□□ -0.68
HMGB1-206ENST00000405805 GLCEO94923 617 aa10.82□□□□□ -0.68
HMGB1-206ENST00000405805 HOXB5P09067 269 aa10.82□□□□□ -0.68
HMGB1-206ENST00000405805 LAP3P28838 519 aa10.82□□□□□ -0.68
HMGB1-206ENST00000405805 TAGLN2P37802 199 aaKnown RBP10.82□□□□□ -0.68
HMGB1-206ENST00000405805 ACY1Q03154 408 aa10.82□□□□□ -0.68
HMGB1-206ENST00000405805 MLC1Q15049 377 aa10.82□□□□□ -0.68
HMGB1-206ENST00000405805 ACER2Q5QJU3 275 aa10.82□□□□□ -0.68
HMGB1-206ENST00000405805 GPR157Q5UAW9 335 aa10.82□□□□□ -0.68
HMGB1-206ENST00000405805 C1orf53Q5VUE5 145 aa10.82□□□□□ -0.68
HMGB1-206ENST00000405805 C1QL3Q5VWW1 255 aa10.82□□□□□ -0.68
HMGB1-206ENST00000405805 CST9LP1Q5W188 147 aa10.82□□□□□ -0.68
HMGB1-206ENST00000405805 SEZ6L2Q6UXD5 910 aa10.82□□□□□ -0.68
HMGB1-206ENST00000405805 PUSL1Q8N0Z8 303 aaKnown RBP10.82□□□□□ -0.68
HMGB1-206ENST00000405805 MUC20Q8N307 709 aaPredicted RBP10.82□□□□□ -0.68
HMGB1-206ENST00000405805 OR2AK2Q8NG84 335 aa10.82□□□□□ -0.68
HMGB1-206ENST00000405805 ZNF775Q96BV0 537 aaPredicted RBP10.82□□□□□ -0.68
HMGB1-206ENST00000405805 COX14Q96I36 57 aa10.82□□□□□ -0.68
HMGB1-206ENST00000405805 SIRT7Q9NRC8 400 aa10.82□□□□□ -0.68
HMGB1-206ENST00000405805 TAS2R8Q9NYW2 309 aa10.82□□□□□ -0.68
HMGB1-206ENST00000405805 UNC80Q8N2C7 3258 aa10.82□□□□□ -0.68
HMGB1-206ENST00000405805 TMEM269A0A1B0GVZ9 245 aa10.81□□□□□ -0.68
HMGB1-206ENST00000405805 AP4M1O00189 453 aa10.81□□□□□ -0.68
HMGB1-206ENST00000405805 NMBP08949 121 aa10.81□□□□□ -0.68
HMGB1-206ENST00000405805 CSF1P09603 554 aa10.81□□□□□ -0.68
HMGB1-206ENST00000405805 NANOS3P60323 173 aaKnown RBP10.81□□□□□ -0.68
HMGB1-206ENST00000405805 ACTBP60709 375 aa10.81□□□□□ -0.68
HMGB1-206ENST00000405805 ACTG1P63261 375 aa10.81□□□□□ -0.68
HMGB1-206ENST00000405805 C2orf76Q3KRA6 126 aa10.81□□□□□ -0.68
HMGB1-206ENST00000405805 CD200R1LQ6Q8B3 271 aa10.81□□□□□ -0.68
HMGB1-206ENST00000405805 DPY19L2P2Q6ZN68 376 aa10.81□□□□□ -0.68
HMGB1-206ENST00000405805 MDGA2Q7Z553 956 aa10.81□□□□□ -0.68
HMGB1-206ENST00000405805 OR51Q1Q8NH59 317 aa10.81□□□□□ -0.68
HMGB1-206ENST00000405805 FOXRED1Q96CU9 486 aaPredicted RBP10.81□□□□□ -0.68
HMGB1-206ENST00000405805 OR5B12Q96R08 314 aa10.81□□□□□ -0.68
HMGB1-206ENST00000405805 TEX101Q9BY14 249 aa10.81□□□□□ -0.68
HMGB1-206ENST00000405805 PCDHGA5Q9Y5G8 931 aa10.81□□□□□ -0.68
HMGB1-206ENST00000405805 A0A0J9YY10 115 aa10.81□□□□□ -0.68
HMGB1-206ENST00000405805 P2RY10O00398 339 aa10.81□□□□□ -0.68
HMGB1-206ENST00000405805 AVPR2P30518 371 aa10.81□□□□□ -0.68
HMGB1-206ENST00000405805 OR8G1Q15617 311 aa10.81□□□□□ -0.68
HMGB1-206ENST00000405805 SLC22A6Q4U2R8 563 aa10.81□□□□□ -0.68
HMGB1-206ENST00000405805 PRAMEF8Q5VWM4 474 aa10.81□□□□□ -0.68
HMGB1-206ENST00000405805 PRAMEF7Q5VXH5 474 aa10.81□□□□□ -0.68
HMGB1-206ENST00000405805 OVCH1Q7RTY7 1134 aa10.81□□□□□ -0.68
HMGB1-206ENST00000405805 OR2L13Q8N349 312 aa10.81□□□□□ -0.68
HMGB1-206ENST00000405805 GLYATL2Q8WU03 294 aa10.81□□□□□ -0.68
HMGB1-206ENST00000405805 NUDCD2Q8WVJ2 157 aa10.81□□□□□ -0.68
HMGB1-206ENST00000405805 CMBLQ96DG6 245 aa10.81□□□□□ -0.68
HMGB1-206ENST00000405805 SLC25A32Q9H2D1 315 aa10.81□□□□□ -0.68
HMGB1-206ENST00000405805 SLCO1C1Q9NYB5 712 aa10.81□□□□□ -0.68
HMGB1-206ENST00000405805 DTX4Q9Y2E6 619 aa10.81□□□□□ -0.68
HMGB1-206ENST00000405805 TRAV8-7A0A075B6U6 113 aa10.81□□□□□ -0.68
HMGB1-206ENST00000405805 IGHV3-20A0A0C4DH32 117 aa10.81□□□□□ -0.68
HMGB1-206ENST00000405805 CTSBP07858 339 aa10.81□□□□□ -0.68
HMGB1-206ENST00000405805 CELA2BP08218 269 aaPredicted RBP10.81□□□□□ -0.68
HMGB1-206ENST00000405805 GIPP09681 153 aaPredicted RBP10.81□□□□□ -0.68
HMGB1-206ENST00000405805 BDH1Q02338 343 aa10.81□□□□□ -0.68
HMGB1-206ENST00000405805 GLO1Q04760 184 aa10.81□□□□□ -0.68
HMGB1-206ENST00000405805 RPL18Q07020 188 aaKnown RBP10.81□□□□□ -0.68
HMGB1-206ENST00000405805 OR5I1Q13606 314 aa10.81□□□□□ -0.68
HMGB1-206ENST00000405805 AWAT2Q6E213 333 aa10.81□□□□□ -0.68
HMGB1-206ENST00000405805 DGAT2L6Q6ZPD8 337 aa10.81□□□□□ -0.68
HMGB1-206ENST00000405805 TMPRSS11FQ6ZWK6 438 aa10.81□□□□□ -0.68
HMGB1-206ENST00000405805 SMIM15Q7Z3B0 74 aa10.81□□□□□ -0.68
HMGB1-206ENST00000405805 OR2G2Q8NGZ5 317 aa10.81□□□□□ -0.68
HMGB1-206ENST00000405805 PATZ1Q9HBE1 687 aaKnown RBP10.81□□□□□ -0.68
HMGB1-206ENST00000405805 FAM60AQ9NP50 221 aa10.81□□□□□ -0.68
HMGB1-206ENST00000405805 TAS2R4Q9NYW5 299 aa10.81□□□□□ -0.68
HMGB1-206ENST00000405805 LRFN1Q9P244 771 aa10.81□□□□□ -0.68
HMGB1-206ENST00000405805 PRODH2Q9UF12 536 aa10.81□□□□□ -0.68
HMGB1-206ENST00000405805 CES1P1Q9UKY3 287 aa10.81□□□□□ -0.68
HMGB1-206ENST00000405805 NOSIPQ9Y314 301 aaKnown RBP10.81□□□□□ -0.68
HMGB1-206ENST00000405805 LSM5Q9Y4Y9 91 aaKnown RBP10.81□□□□□ -0.68
HMGB1-206ENST00000405805 THSD7BQ9C0I4 1608 aa10.81□□□□□ -0.68
HMGB1-206ENST00000405805 DOCK9Q9BZ29 2069 aa10.8□□□□□ -0.68
HMGB1-206ENST00000405805 A0A1W2PPH5 198 aa10.8□□□□□ -0.68
HMGB1-206ENST00000405805 DEFB133Q30KQ1 61 aa10.8□□□□□ -0.68
HMGB1-206ENST00000405805 NKAIN2Q5VXU1 208 aa10.8□□□□□ -0.68
HMGB1-206ENST00000405805 HSD17B13Q7Z5P4 300 aaPredicted RBP10.8□□□□□ -0.68
HMGB1-206ENST00000405805 SEMA6DQ8NFY4 1073 aa10.8□□□□□ -0.68
HMGB1-206ENST00000405805 OR2A5Q96R48 311 aa10.8□□□□□ -0.68
HMGB1-206ENST00000405805 KCNJ15Q99712 375 aa10.8□□□□□ -0.68
HMGB1-206ENST00000405805 CNTNAP3Q9BZ76 1288 aa10.8□□□□□ -0.68
HMGB1-206ENST00000405805 OPN3Q9H1Y3 402 aaPredicted RBP10.8□□□□□ -0.68
HMGB1-206ENST00000405805 WBP1LQ9NX94 342 aa10.8□□□□□ -0.68
HMGB1-206ENST00000405805 KLRF1Q9NZS2 232 aa10.8□□□□□ -0.68
HMGB1-206ENST00000405805 GAB2Q9UQC2 676 aa10.8□□□□□ -0.68
HMGB1-206ENST00000405805 A0A087WV62 115 aa10.8□□□□□ -0.68
HMGB1-206ENST00000405805 ZNF726A6NNF4 738 aa10.8□□□□□ -0.68
HMGB1-206ENST00000405805 TBX19O60806 448 aa10.8□□□□□ -0.68
HMGB1-206ENST00000405805 IFNA21P01568 189 aa10.8□□□□□ -0.68
HMGB1-206ENST00000405805 EFNB2P52799 333 aa10.8□□□□□ -0.68
HMGB1-206ENST00000405805 FOXL2P58012 376 aa10.8□□□□□ -0.68
HMGB1-206ENST00000405805 RAP1AP62834 184 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms