RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 BCL7BQ9BQE9 202 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 LINC00470Q9BZP3 86 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 SLC24A3Q9HC58 644 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 GLRX2Q9NS18 164 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 ZNF281Q9Y2X9 895 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 FAM215AQ9Y5M1 114 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 ROS1P08922 2347 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 CFAP46Q8IYW2 2715 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 A0A1W2PR80 420 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 CIB4A0PJX0 185 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 ANKRD61A6NGH8 418 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 WDR1O75083 606 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 ZNF254O75437 659 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 RAD51DO75771 328 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 LYZL6O75951 148 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 NCR1O76036 304 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 TOXO94900 526 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 CLEC2LP0C7M8 214 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 RPS19P39019 145 aaKnown RBP3.25□□□□□ -1.89
RTN4-208ENST00000404909 OR3A2P47893 321 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 TDGF1P3P51864 188 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 MRPL28Q13084 256 aaKnown RBP3.25□□□□□ -1.89
RTN4-208ENST00000404909 TSC22D1Q15714 1073 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 DGUOKQ16854 277 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 ZNF829Q3KNS6 432 aaPredicted RBP3.25□□□□□ -1.89
RTN4-208ENST00000404909 C1orf185Q5T7R7 199 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 BCL2L15Q5TBC7 163 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 ZNF544Q6NX49 715 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 FOXL2NBQ6ZUU3 175 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 SEM1Q6ZVN7 128 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 ABHD12BQ7Z5M8 362 aaPredicted RBP3.25□□□□□ -1.89
RTN4-208ENST00000404909 SYT9Q86SS6 491 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 NAA40Q86UY6 237 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 C4orf45Q96LM5 186 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 ATF6BQ99941 703 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 C6orf62Q9GZU0 229 aaPredicted RBP3.25□□□□□ -1.89
RTN4-208ENST00000404909 OPN3Q9H1Y3 402 aaPredicted RBP3.25□□□□□ -1.89
RTN4-208ENST00000404909 PPIL3Q9H2H8 161 aaKnown RBP3.25□□□□□ -1.89
RTN4-208ENST00000404909 PRORYQ9H606 182 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 GP6Q9HCN6 339 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 PNRC2Q9NPJ4 139 aaKnown RBP3.25□□□□□ -1.89
RTN4-208ENST00000404909 MALT1Q9UDY8 824 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 OR52A1Q9UKL2 312 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 TIMM10BQ9Y5J6 103 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 R4GMQ9 66 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 A6NIN4 97 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 TMEM212A6NML5 194 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 OR4C45A6NMZ5 311 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 GPRIN2O60269 458 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 IL18BPO95998 194 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 SERPINA3P01011 423 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 CST2P09228 141 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 TMIGD3P0DMS9 266 aaPredicted RBP3.25□□□□□ -1.89
RTN4-208ENST00000404909 BMP5P22003 454 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 MPGP29372 298 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 KIR3DL2P43630 455 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 HTR5AP47898 357 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 CX3CR1P49238 355 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 ZNF121P58317 390 aaPredicted RBP3.25□□□□□ -1.89
RTN4-208ENST00000404909 PCBD1P61457 104 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 RPS11P62280 158 aaKnown RBP eCLIP3.25□□□□□ -1.89
RTN4-208ENST00000404909 PSG4Q00888 419 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 SCRN3Q0VDG4 424 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 PMPCAQ10713 525 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 CCDC92Q53HC0 331 aaPredicted RBP3.25□□□□□ -1.89
RTN4-208ENST00000404909 ZMAT1Q5H9K5 638 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 ELFN2Q5R3F8 820 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 ALKBH2Q6NS38 261 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 CD200R1LQ6Q8B3 271 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 DEGS2Q6QHC5 323 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 TFAP2EQ6VUC0 442 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 NCCRP1Q6ZVX7 275 aaPredicted RBP3.25□□□□□ -1.89
RTN4-208ENST00000404909 FAM57BQ71RH2 274 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 BTLAQ7Z6A9 289 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 DOLPP1Q86YN1 238 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 NAXEQ8NCW5 288 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 DYNC2LI1Q8TCX1 351 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 HAVCR2Q8TDQ0 301 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 RGP1Q92546 391 aaPredicted RBP3.25□□□□□ -1.89
RTN4-208ENST00000404909 KCNS3Q9BQ31 491 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 PROCRQ9UNN8 238 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 CADP27708 2225 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 SHISA3A0PJX4 238 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 TMEM8BA6NDV4 472 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 MBD3L4A6NDZ8 208 aaPredicted RBP3.25□□□□□ -1.89
RTN4-208ENST00000404909 MBD3L3A6NE82 208 aaPredicted RBP3.25□□□□□ -1.89
RTN4-208ENST00000404909 MBD3L5A6NJ08 208 aaPredicted RBP3.25□□□□□ -1.89
RTN4-208ENST00000404909 ZNF879B4DU55 563 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 RPL36A-HNRNPH2H7BZ11 118 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 P2RY10O00398 339 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 TBX1O43435 398 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 ITGA5P08648 1049 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 CCL2P13500 99 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 CD53P19397 219 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 MYL9P24844 172 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 FGF9P31371 208 aaPredicted RBP3.25□□□□□ -1.89
RTN4-208ENST00000404909 PTGER4P35408 488 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 SOX6P35712 828 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 GRB2P62993 217 aaKnown RBP3.25□□□□□ -1.89
RTN4-208ENST00000404909 TGFBR3Q03167 851 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms