RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 SLCO1C1Q9NYB5 712 aa10.7□□□□□ -0.7
LINC00339-201ENST00000404210 NPAP1Q9NZP6 1156 aa10.7□□□□□ -0.7
LINC00339-201ENST00000404210 ERVK-18Q9QC07 812 aa10.7□□□□□ -0.7
LINC00339-201ENST00000404210 KLHDC2Q9Y2U9 406 aa10.7□□□□□ -0.7
LINC00339-201ENST00000404210 CAB39Q9Y376 341 aaPredicted RBP10.7□□□□□ -0.7
LINC00339-201ENST00000404210 HEATR1Q9H583 2144 aaKnown RBP10.7□□□□□ -0.7
LINC00339-201ENST00000404210 IGHV1-18A0A0C4DH31 117 aa10.69□□□□□ -0.7
LINC00339-201ENST00000404210 METTL15A6NJ78 407 aa10.69□□□□□ -0.7
LINC00339-201ENST00000404210 PRSS44E7EML9 344 aa10.69□□□□□ -0.7
LINC00339-201ENST00000404210 TNFAIP8O95379 198 aa10.69□□□□□ -0.7
LINC00339-201ENST00000404210 APOC1P02654 83 aa10.69□□□□□ -0.7
LINC00339-201ENST00000404210 KRT8P05787 483 aa10.69□□□□□ -0.7
LINC00339-201ENST00000404210 ADRA2AP08913 450 aa10.69□□□□□ -0.7
LINC00339-201ENST00000404210 TACSTD2P09758 323 aa10.69□□□□□ -0.7
LINC00339-201ENST00000404210 EEF1B2P24534 225 aaKnown RBP10.69□□□□□ -0.7
LINC00339-201ENST00000404210 APEX1P27695 318 aaKnown RBP10.69□□□□□ -0.7
LINC00339-201ENST00000404210 HTR5AP47898 357 aa10.69□□□□□ -0.7
LINC00339-201ENST00000404210 GDI2P50395 445 aaKnown RBP10.69□□□□□ -0.7
LINC00339-201ENST00000404210 ETV1P50549 477 aa10.69□□□□□ -0.7
LINC00339-201ENST00000404210 ZNF83P51522 516 aa10.69□□□□□ -0.7
LINC00339-201ENST00000404210 IDH3GP51553 393 aaPredicted RBP10.69□□□□□ -0.7
LINC00339-201ENST00000404210 TPTEP56180 551 aa10.69□□□□□ -0.7
LINC00339-201ENST00000404210 TBC1D28Q2M2D7 210 aa10.69□□□□□ -0.7
LINC00339-201ENST00000404210 KRTAP27-1Q3LI81 207 aa10.69□□□□□ -0.7
LINC00339-201ENST00000404210 CDONQ4KMG0 1287 aa10.69□□□□□ -0.7
LINC00339-201ENST00000404210 SYS1Q8N2H4 156 aa10.69□□□□□ -0.7
LINC00339-201ENST00000404210 NANOGP1Q8N7R0 232 aa10.69□□□□□ -0.7
LINC00339-201ENST00000404210 SLC30A7Q8NEW0 376 aa10.69□□□□□ -0.7
LINC00339-201ENST00000404210 SPTSSAQ969W0 71 aa10.69□□□□□ -0.7
LINC00339-201ENST00000404210 ALG8Q9BVK2 526 aa10.69□□□□□ -0.7
LINC00339-201ENST00000404210 ELOVL3Q9HB03 270 aa10.69□□□□□ -0.7
LINC00339-201ENST00000404210 PRR14LQ5THK1 2151 aa10.69□□□□□ -0.7
LINC00339-201ENST00000404210 RELNP78509 3460 aa10.68□□□□□ -0.7
LINC00339-201ENST00000404210 LOC100509620A0A075B734 347 aa10.68□□□□□ -0.7
LINC00339-201ENST00000404210 TMEM129A0AVI4 362 aa10.68□□□□□ -0.7
LINC00339-201ENST00000404210 DPRXA6NFQ7 191 aa10.68□□□□□ -0.7
LINC00339-201ENST00000404210 PRR32B1ATL7 298 aa10.68□□□□□ -0.7
LINC00339-201ENST00000404210 M0R1B8 84 aa10.68□□□□□ -0.7
LINC00339-201ENST00000404210 CLDN1O95832 211 aa10.68□□□□□ -0.7
LINC00339-201ENST00000404210 CELA3BP08861 270 aa10.68□□□□□ -0.7
LINC00339-201ENST00000404210 CECR9P0C854 216 aa10.68□□□□□ -0.7
LINC00339-201ENST00000404210 ZNF35P13682 527 aa10.68□□□□□ -0.7
LINC00339-201ENST00000404210 CD40P25942 277 aa10.68□□□□□ -0.7
LINC00339-201ENST00000404210 OTX1P32242 354 aaPredicted RBP10.68□□□□□ -0.7
LINC00339-201ENST00000404210 RIDAP52758 137 aaKnown RBP10.68□□□□□ -0.7
LINC00339-201ENST00000404210 ACTA2P62736 377 aa10.68□□□□□ -0.7
LINC00339-201ENST00000404210 ACTG2P63267 376 aa10.68□□□□□ -0.7
LINC00339-201ENST00000404210 IRF3Q14653 427 aa10.68□□□□□ -0.7
LINC00339-201ENST00000404210 DAZAP2Q15038 168 aaPredicted RBP10.68□□□□□ -0.7
LINC00339-201ENST00000404210 NCMAPQ5T1S8 102 aa10.68□□□□□ -0.7
LINC00339-201ENST00000404210 SP5Q6BEB4 398 aaPredicted RBP10.68□□□□□ -0.7
LINC00339-201ENST00000404210 ALKBH2Q6NS38 261 aa10.68□□□□□ -0.7
LINC00339-201ENST00000404210 TMEM108Q6UXF1 575 aa10.68□□□□□ -0.7
LINC00339-201ENST00000404210 LRRN1Q6UXK5 716 aa10.68□□□□□ -0.7
LINC00339-201ENST00000404210 TMPRSS11AQ6ZMR5 421 aa10.68□□□□□ -0.7
LINC00339-201ENST00000404210 SPATC1Q76KD6 591 aa10.68□□□□□ -0.7
LINC00339-201ENST00000404210 KLHL36Q8N4N3 616 aa10.68□□□□□ -0.7
LINC00339-201ENST00000404210 RFLNBQ8N5W9 214 aa10.68□□□□□ -0.7
LINC00339-201ENST00000404210 YIPF7Q8N8F6 280 aa10.68□□□□□ -0.7
LINC00339-201ENST00000404210 OR52N1Q8NH53 320 aa10.68□□□□□ -0.7
LINC00339-201ENST00000404210 SGCDQ92629 289 aa10.68□□□□□ -0.7
LINC00339-201ENST00000404210 CCDC90BQ9GZT6 254 aa10.68□□□□□ -0.7
LINC00339-201ENST00000404210 ESRP2Q9H6T0 727 aaKnown RBP10.68□□□□□ -0.7
LINC00339-201ENST00000404210 CRIM1Q9NZV1 1036 aa10.68□□□□□ -0.7
LINC00339-201ENST00000404210 CLEC2DQ9UHP7 191 aa10.68□□□□□ -0.7
LINC00339-201ENST00000404210 MRM2Q9UI43 246 aaKnown RBP10.68□□□□□ -0.7
LINC00339-201ENST00000404210 IKZF2Q9UKS7 526 aa10.68□□□□□ -0.7
LINC00339-201ENST00000404210 ERGIC3Q9Y282 383 aa10.68□□□□□ -0.7
LINC00339-201ENST00000404210 LRP12Q9Y561 859 aa10.68□□□□□ -0.7
LINC00339-201ENST00000404210 SPTBN1Q01082 2364 aaKnown RBP10.68□□□□□ -0.7
LINC00339-201ENST00000404210 RTTNQ86VV8 2226 aa10.68□□□□□ -0.7
LINC00339-201ENST00000404210 C5orf49A4QMS7 147 aa10.67□□□□□ -0.7
LINC00339-201ENST00000404210 ACOD1A6NK06 481 aa10.67□□□□□ -0.7
LINC00339-201ENST00000404210 F5H5K5 113 aa10.67□□□□□ -0.7
LINC00339-201ENST00000404210 J3QLW9 94 aa10.67□□□□□ -0.7
LINC00339-201ENST00000404210 M0R135 149 aa10.67□□□□□ -0.7
LINC00339-201ENST00000404210 PSMD9O00233 223 aa10.67□□□□□ -0.7
LINC00339-201ENST00000404210 MAGEB4O15481 346 aaPredicted RBP10.67□□□□□ -0.7
LINC00339-201ENST00000404210 ABHD16AO95870 558 aa10.67□□□□□ -0.7
LINC00339-201ENST00000404210 MT-ND2P03891 347 aa10.67□□□□□ -0.7
LINC00339-201ENST00000404210 ZNF19P17023 458 aa10.67□□□□□ -0.7
LINC00339-201ENST00000404210 HSD11B1P28845 292 aa10.67□□□□□ -0.7
LINC00339-201ENST00000404210 PCSK6P29122 969 aa10.67□□□□□ -0.7
LINC00339-201ENST00000404210 OR12D2P58182 307 aa10.67□□□□□ -0.7
LINC00339-201ENST00000404210 GALK2Q01415 458 aa10.67□□□□□ -0.7
LINC00339-201ENST00000404210 NAAAQ02083 359 aa10.67□□□□□ -0.7
LINC00339-201ENST00000404210 MRPL28Q13084 256 aaKnown RBP10.67□□□□□ -0.7
LINC00339-201ENST00000404210 TP53I3Q53FA7 332 aa10.67□□□□□ -0.7
LINC00339-201ENST00000404210 BEX5Q5H9J7 111 aa10.67□□□□□ -0.7
LINC00339-201ENST00000404210 LIPNQ5VXI9 398 aa10.67□□□□□ -0.7
LINC00339-201ENST00000404210 ARL9Q6T311 187 aa10.67□□□□□ -0.7
LINC00339-201ENST00000404210 DRAM2Q6UX65 266 aa10.67□□□□□ -0.7
LINC00339-201ENST00000404210 MEX3BQ6ZN04 569 aaKnown RBP10.67□□□□□ -0.7
LINC00339-201ENST00000404210 MYPOPQ86VE0 399 aaPredicted RBP10.67□□□□□ -0.7
LINC00339-201ENST00000404210 ZNF283Q8N7M2 679 aa10.67□□□□□ -0.7
LINC00339-201ENST00000404210 HAVCR2Q8TDQ0 301 aa10.67□□□□□ -0.7
LINC00339-201ENST00000404210 SLC7A6Q92536 515 aa10.67□□□□□ -0.7
LINC00339-201ENST00000404210 ZNF799Q96GE5 643 aa10.67□□□□□ -0.7
LINC00339-201ENST00000404210 C4orf45Q96LM5 186 aa10.67□□□□□ -0.7
LINC00339-201ENST00000404210 HS3ST6Q96QI5 342 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms