RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 TCRBV5S2A0A599 114 aa11.29□□□□□ -0.6
SDF4-203ENST00000403997 OR6C68A6NDL8 312 aa11.29□□□□□ -0.6
SDF4-203ENST00000403997 DYNC1I1O14576 645 aa11.29□□□□□ -0.6
SDF4-203ENST00000403997 UBOX5O94941 541 aa11.29□□□□□ -0.6
SDF4-203ENST00000403997 GASTP01350 101 aa11.29□□□□□ -0.6
SDF4-203ENST00000403997 T-ENOLP0DO92 83 aa11.29□□□□□ -0.6
SDF4-203ENST00000403997 ANPEPP15144 967 aa11.29□□□□□ -0.6
SDF4-203ENST00000403997 KITLGP21583 273 aa11.29□□□□□ -0.6
SDF4-203ENST00000403997 TNFSF4P23510 183 aa11.29□□□□□ -0.6
SDF4-203ENST00000403997 RGS6P49758 472 aa11.29□□□□□ -0.6
SDF4-203ENST00000403997 HIST1H3AP68431 136 aa11.29□□□□□ -0.6
SDF4-203ENST00000403997 MS4A2Q01362 244 aa11.29□□□□□ -0.6
SDF4-203ENST00000403997 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.29□□□□□ -0.6
SDF4-203ENST00000403997 SLC3A1Q07837 685 aa11.29□□□□□ -0.6
SDF4-203ENST00000403997 PPP1R8Q12972 351 aaKnown RBP11.29□□□□□ -0.6
SDF4-203ENST00000403997 CDK5R2Q13319 367 aa11.29□□□□□ -0.6
SDF4-203ENST00000403997 FAM98BQ52LJ0 330 aaKnown RBP11.29□□□□□ -0.6
SDF4-203ENST00000403997 SPRNQ5BIV9 151 aa11.29□□□□□ -0.6
SDF4-203ENST00000403997 HIST2H3PS2Q5TEC6 136 aa11.29□□□□□ -0.6
SDF4-203ENST00000403997 LCN8Q6JVE9 175 aa11.29□□□□□ -0.6
SDF4-203ENST00000403997 ACSM5Q6NUN0 579 aa11.29□□□□□ -0.6
SDF4-203ENST00000403997 RPL13AP3Q6NVV1 102 aa11.29□□□□□ -0.6
SDF4-203ENST00000403997 HIST2H3AQ71DI3 136 aa11.29□□□□□ -0.6
SDF4-203ENST00000403997 ZBTB46Q86UZ6 589 aa11.29□□□□□ -0.6
SDF4-203ENST00000403997 SLC26A10Q8NG04 563 aa11.29□□□□□ -0.6
SDF4-203ENST00000403997 OR2Z1Q8NG97 314 aa11.29□□□□□ -0.6
SDF4-203ENST00000403997 OR5L1Q8NGL2 311 aa11.29□□□□□ -0.6
SDF4-203ENST00000403997 OR4C15Q8NGM1 316 aa11.29□□□□□ -0.6
SDF4-203ENST00000403997 OR2AJ1Q8NGZ0 328 aa11.29□□□□□ -0.6
SDF4-203ENST00000403997 OR51F2Q8NH61 342 aa11.29□□□□□ -0.6
SDF4-203ENST00000403997 RAB39BQ96DA2 213 aa11.29□□□□□ -0.6
SDF4-203ENST00000403997 DCLRE1CQ96SD1 692 aaKnown RBP11.29□□□□□ -0.6
SDF4-203ENST00000403997 COQ7Q99807 217 aa11.29□□□□□ -0.6
SDF4-203ENST00000403997 BTBD10Q9BSF8 475 aa11.29□□□□□ -0.6
SDF4-203ENST00000403997 HDHD2Q9H0R4 259 aa11.29□□□□□ -0.6
SDF4-203ENST00000403997 MAGIXQ9H6Y5 334 aa11.29□□□□□ -0.6
SDF4-203ENST00000403997 ZNF665Q9H7R5 613 aa11.29□□□□□ -0.6
SDF4-203ENST00000403997 PTTG3PQ9NZH4 202 aa11.29□□□□□ -0.6
SDF4-203ENST00000403997 ATPIF1Q9UII2 106 aa11.29□□□□□ -0.6
SDF4-203ENST00000403997 CDH10Q9Y6N8 788 aa11.29□□□□□ -0.6
SDF4-203ENST00000403997 CD55P08174 381 aa11.28□□□□□ -0.6
SDF4-203ENST00000403997 RAC2P15153 192 aa11.28□□□□□ -0.6
SDF4-203ENST00000403997 MAGEA2P43356 314 aa11.28□□□□□ -0.6
SDF4-203ENST00000403997 COX10Q12887 443 aa11.28□□□□□ -0.6
SDF4-203ENST00000403997 HLXQ14774 488 aaPredicted RBP11.28□□□□□ -0.6
SDF4-203ENST00000403997 Q6ZR03 302 aa11.28□□□□□ -0.6
SDF4-203ENST00000403997 ZNF771Q7L3S4 317 aaPredicted RBP11.28□□□□□ -0.6
SDF4-203ENST00000403997 PEG10Q86TG7 708 aaKnown RBP11.28□□□□□ -0.6
SDF4-203ENST00000403997 LINC00346Q8IVM7 164 aa11.28□□□□□ -0.6
SDF4-203ENST00000403997 OR5AS1Q8N127 324 aa11.28□□□□□ -0.6
SDF4-203ENST00000403997 CYB561A3Q8NBI2 242 aa11.28□□□□□ -0.6
SDF4-203ENST00000403997 AQP11Q8NBQ7 271 aa11.28□□□□□ -0.6
SDF4-203ENST00000403997 APOBEC3DQ96AK3 386 aaPredicted RBP11.28□□□□□ -0.6
SDF4-203ENST00000403997 LRGUKQ96M69 825 aa11.28□□□□□ -0.6
SDF4-203ENST00000403997 PITX2Q99697 317 aa11.28□□□□□ -0.6
SDF4-203ENST00000403997 GAL3ST1Q99999 423 aa11.28□□□□□ -0.6
SDF4-203ENST00000403997 REEP1Q9H902 201 aa11.28□□□□□ -0.6
SDF4-203ENST00000403997 PRPF19Q9UMS4 504 aaKnown RBP11.28□□□□□ -0.6
SDF4-203ENST00000403997 U3KQV3 271 aa11.28□□□□□ -0.6
SDF4-203ENST00000403997 CUBNO60494 3623 aa11.28□□□□□ -0.6
SDF4-203ENST00000403997 SVEP1Q4LDE5 3571 aa11.27□□□□□ -0.6
SDF4-203ENST00000403997 TRAV20A0A0B4J274 112 aa11.27□□□□□ -0.61
SDF4-203ENST00000403997 ISPDA4D126 451 aa11.27□□□□□ -0.61
SDF4-203ENST00000403997 J3QW42 95 aa11.27□□□□□ -0.61
SDF4-203ENST00000403997 BHLHE40O14503 412 aa11.27□□□□□ -0.61
SDF4-203ENST00000403997 ZNF823P16415 610 aa11.27□□□□□ -0.61
SDF4-203ENST00000403997 PYCR1P32322 319 aa11.27□□□□□ -0.61
SDF4-203ENST00000403997 ERFP50548 548 aa11.27□□□□□ -0.61
SDF4-203ENST00000403997 SRSF2Q01130 221 aaKnown RBP11.27□□□□□ -0.61
SDF4-203ENST00000403997 OR2T5Q6IEZ7 315 aa11.27□□□□□ -0.61
SDF4-203ENST00000403997 ZNF770Q6IQ21 691 aaPredicted RBP11.27□□□□□ -0.61
SDF4-203ENST00000403997 SLC18B1Q6NT16 456 aa11.27□□□□□ -0.61
SDF4-203ENST00000403997 FAHD2BQ6P2I3 314 aaPredicted RBP11.27□□□□□ -0.61
SDF4-203ENST00000403997 CFAP77Q6ZQR2 320 aa11.27□□□□□ -0.61
SDF4-203ENST00000403997 RASSF6Q6ZTQ3 369 aa11.27□□□□□ -0.61
SDF4-203ENST00000403997 PHC2Q8IXK0 858 aa11.27□□□□□ -0.61
SDF4-203ENST00000403997 ATG16L2Q8NAA4 619 aa11.27□□□□□ -0.61
SDF4-203ENST00000403997 OR2T29Q8NH02 315 aa11.27□□□□□ -0.61
SDF4-203ENST00000403997 POP5Q969H6 163 aaKnown RBP11.27□□□□□ -0.61
SDF4-203ENST00000403997 CCDC124Q96CT7 223 aaKnown RBP11.27□□□□□ -0.61
SDF4-203ENST00000403997 FAHD2AQ96GK7 314 aa11.27□□□□□ -0.61
SDF4-203ENST00000403997 CLPTM1LQ96KA5 538 aa11.27□□□□□ -0.61
SDF4-203ENST00000403997 THTPAQ9BU02 230 aa11.27□□□□□ -0.61
SDF4-203ENST00000403997 TSSK6Q9BXA6 273 aa11.27□□□□□ -0.61
SDF4-203ENST00000403997 PLA2G12AQ9BZM1 189 aa11.27□□□□□ -0.61
SDF4-203ENST00000403997 TBC1D23Q9NUY8 699 aa11.27□□□□□ -0.61
SDF4-203ENST00000403997 TAS2R1Q9NYW7 299 aa11.27□□□□□ -0.61
SDF4-203ENST00000403997 IL20Q9NYY1 176 aa11.27□□□□□ -0.61
SDF4-203ENST00000403997 SAMHD1Q9Y3Z3 626 aaKnown RBP11.27□□□□□ -0.61
SDF4-203ENST00000403997 F5H5K5 113 aa11.26□□□□□ -0.61
SDF4-203ENST00000403997 SURF4O15260 269 aa11.26□□□□□ -0.61
SDF4-203ENST00000403997 PLPP2O43688 288 aa11.26□□□□□ -0.61
SDF4-203ENST00000403997 IGHV2-5P01817 119 aa11.26□□□□□ -0.61
SDF4-203ENST00000403997 SBK2P0C263 348 aa11.26□□□□□ -0.61
SDF4-203ENST00000403997 TNFRSF1AP19438 455 aa11.26□□□□□ -0.61
SDF4-203ENST00000403997 GGT2P36268 569 aa11.26□□□□□ -0.61
SDF4-203ENST00000403997 ECH1Q13011 328 aa11.26□□□□□ -0.61
SDF4-203ENST00000403997 HNRNPA0Q13151 305 aaKnown RBP11.26□□□□□ -0.61
SDF4-203ENST00000403997 MICAQ29983 383 aa11.26□□□□□ -0.61
SDF4-203ENST00000403997 RSPO1Q2MKA7 263 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms