RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 SAMD8Q96LT4 415 aa12.99□□□□□ -0.33
TPM1-207ENST00000403994 COG8Q96MW5 612 aa12.99□□□□□ -0.33
TPM1-207ENST00000403994 DCLRE1CQ96SD1 692 aaKnown RBP12.99□□□□□ -0.33
TPM1-207ENST00000403994 COQ7Q99807 217 aa12.99□□□□□ -0.33
TPM1-207ENST00000403994 IFT27Q9BW83 186 aa12.99□□□□□ -0.33
TPM1-207ENST00000403994 IL1RAPQ9NPH3 570 aa12.99□□□□□ -0.33
TPM1-207ENST00000403994 NDE1Q9NXR1 346 aa12.99□□□□□ -0.33
TPM1-207ENST00000403994 METRNQ9UJH8 293 aa12.99□□□□□ -0.33
TPM1-207ENST00000403994 LOC105371242A0A075B767 164 aa12.98□□□□□ -0.33
TPM1-207ENST00000403994 DCTN3O75935 186 aa12.98□□□□□ -0.33
TPM1-207ENST00000403994 AVPP01185 164 aa12.98□□□□□ -0.33
TPM1-207ENST00000403994 RAC2P15153 192 aa12.98□□□□□ -0.33
TPM1-207ENST00000403994 ATP6V1B2P21281 511 aa12.98□□□□□ -0.33
TPM1-207ENST00000403994 TNFSF4P23510 183 aa12.98□□□□□ -0.33
TPM1-207ENST00000403994 CENPAP49450 140 aa12.98□□□□□ -0.33
TPM1-207ENST00000403994 HLXQ14774 488 aaPredicted RBP12.98□□□□□ -0.33
TPM1-207ENST00000403994 PGBD2Q6P3X8 592 aa12.98□□□□□ -0.33
TPM1-207ENST00000403994 CORO6Q6QEF8 472 aa12.98□□□□□ -0.33
TPM1-207ENST00000403994 FBXW12Q6X9E4 464 aa12.98□□□□□ -0.33
TPM1-207ENST00000403994 CFAP77Q6ZQR2 320 aa12.98□□□□□ -0.33
TPM1-207ENST00000403994 PIGWQ7Z7B1 504 aa12.98□□□□□ -0.33
TPM1-207ENST00000403994 PEG10Q86TG7 708 aaKnown RBP12.98□□□□□ -0.33
TPM1-207ENST00000403994 ZDHHC21Q8IVQ6 265 aa12.98□□□□□ -0.33
TPM1-207ENST00000403994 OR6V1Q8N148 313 aa12.98□□□□□ -0.33
TPM1-207ENST00000403994 SDR9C7Q8NEX9 313 aa12.98□□□□□ -0.33
TPM1-207ENST00000403994 GJC3Q8NFK1 279 aa12.98□□□□□ -0.33
TPM1-207ENST00000403994 OR4K13Q8NH42 304 aa12.98□□□□□ -0.33
TPM1-207ENST00000403994 HAVCR1Q96D42 359 aa12.98□□□□□ -0.33
TPM1-207ENST00000403994 TMPRSS13Q9BYE2 586 aa12.98□□□□□ -0.33
TPM1-207ENST00000403994 FN3KQ9H479 309 aa12.98□□□□□ -0.33
TPM1-207ENST00000403994 RPRD1BQ9NQG5 326 aaKnown RBP12.98□□□□□ -0.33
TPM1-207ENST00000403994 TMEM106BQ9NUM4 274 aa12.98□□□□□ -0.33
TPM1-207ENST00000403994 UBAP1Q9NZ09 502 aa12.98□□□□□ -0.33
TPM1-207ENST00000403994 PTTG3PQ9NZH4 202 aa12.98□□□□□ -0.33
TPM1-207ENST00000403994 B9D1Q9UPM9 204 aa12.98□□□□□ -0.33
TPM1-207ENST00000403994 NPTNQ9Y639 398 aa12.98□□□□□ -0.33
TPM1-207ENST00000403994 RENP00797 406 aa12.97□□□□□ -0.33
TPM1-207ENST00000403994 TNFRSF1AP19438 455 aa12.97□□□□□ -0.33
TPM1-207ENST00000403994 IFNGR2P38484 337 aa12.97□□□□□ -0.33
TPM1-207ENST00000403994 MXRA7P84157 204 aa12.97□□□□□ -0.33
TPM1-207ENST00000403994 TSPAN31Q12999 210 aa12.97□□□□□ -0.33
TPM1-207ENST00000403994 SCGB2A2Q13296 93 aa12.97□□□□□ -0.33
TPM1-207ENST00000403994 SPATS1Q496A3 300 aa12.97□□□□□ -0.33
TPM1-207ENST00000403994 DCAF12L2Q5VW00 463 aa12.97□□□□□ -0.33
TPM1-207ENST00000403994 C1QL2Q7Z5L3 287 aa12.97□□□□□ -0.33
TPM1-207ENST00000403994 ZBTB46Q86UZ6 589 aa12.97□□□□□ -0.33
TPM1-207ENST00000403994 LINC00346Q8IVM7 164 aa12.97□□□□□ -0.33
TPM1-207ENST00000403994 OR5AS1Q8N127 324 aa12.97□□□□□ -0.33
TPM1-207ENST00000403994 ZNF283Q8N7M2 679 aa12.97□□□□□ -0.33
TPM1-207ENST00000403994 OR10AD1Q8NGE0 317 aa12.97□□□□□ -0.33
TPM1-207ENST00000403994 ITLN1Q8WWA0 313 aa12.97□□□□□ -0.33
TPM1-207ENST00000403994 APOBEC3DQ96AK3 386 aaPredicted RBP12.97□□□□□ -0.33
TPM1-207ENST00000403994 OR2V2Q96R30 315 aa12.97□□□□□ -0.33
TPM1-207ENST00000403994 SIGLEC11Q96RL6 698 aa12.97□□□□□ -0.33
TPM1-207ENST00000403994 BTBD10Q9BSF8 475 aa12.97□□□□□ -0.33
TPM1-207ENST00000403994 OCEL1Q9H607 264 aa12.97□□□□□ -0.33
TPM1-207ENST00000403994 IL19Q9UHD0 177 aa12.97□□□□□ -0.33
TPM1-207ENST00000403994 TMCC3Q9ULS5 477 aa12.97□□□□□ -0.33
TPM1-207ENST00000403994 LYVE1Q9Y5Y7 322 aa12.97□□□□□ -0.33
TPM1-207ENST00000403994 CDH10Q9Y6N8 788 aa12.97□□□□□ -0.33
TPM1-207ENST00000403994 OR6C68A6NDL8 312 aa12.96□□□□□ -0.33
TPM1-207ENST00000403994 J3QLI3 93 aa12.96□□□□□ -0.33
TPM1-207ENST00000403994 VENTXO95231 258 aa12.96□□□□□ -0.33
TPM1-207ENST00000403994 EPHA1P21709 976 aa12.96□□□□□ -0.33
TPM1-207ENST00000403994 NOS3P29474 1203 aa12.96□□□□□ -0.33
TPM1-207ENST00000403994 MAGEA2P43356 314 aa12.96□□□□□ -0.33
TPM1-207ENST00000403994 MMP16P51512 607 aa12.96□□□□□ -0.33
TPM1-207ENST00000403994 BTG1P62324 171 aa12.96□□□□□ -0.33
TPM1-207ENST00000403994 LCN2P80188 198 aa12.96□□□□□ -0.33
TPM1-207ENST00000403994 KRTAP27-1Q3LI81 207 aa12.96□□□□□ -0.33
TPM1-207ENST00000403994 CLEC12AQ5QGZ9 265 aa12.96□□□□□ -0.33
TPM1-207ENST00000403994 SLC18B1Q6NT16 456 aa12.96□□□□□ -0.33
TPM1-207ENST00000403994 CYP2R1Q6VVX0 501 aa12.96□□□□□ -0.33
TPM1-207ENST00000403994 TEX29Q8N6K0 151 aa12.96□□□□□ -0.33
TPM1-207ENST00000403994 OR9Q2Q8NGE9 314 aa12.96□□□□□ -0.33
TPM1-207ENST00000403994 EGLN3Q9H6Z9 239 aa12.96□□□□□ -0.33
TPM1-207ENST00000403994 SRA1Q9HD15 236 aaKnown RBP12.96□□□□□ -0.33
TPM1-207ENST00000403994 PPP1R3CQ9UQK1 317 aa12.96□□□□□ -0.33
TPM1-207ENST00000403994 A0A0A6YYJ9 748 aa12.95□□□□□ -0.34
TPM1-207ENST00000403994 SURF4O15260 269 aa12.95□□□□□ -0.34
TPM1-207ENST00000403994 IDH3BO43837 385 aa12.95□□□□□ -0.34
TPM1-207ENST00000403994 RGS9O75916 674 aaPredicted RBP12.95□□□□□ -0.34
TPM1-207ENST00000403994 ADRA2CP18825 462 aa12.95□□□□□ -0.34
TPM1-207ENST00000403994 GATA3P23771 443 aa12.95□□□□□ -0.34
TPM1-207ENST00000403994 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.95□□□□□ -0.34
TPM1-207ENST00000403994 ZMYND11Q15326 602 aa12.95□□□□□ -0.34
TPM1-207ENST00000403994 OR2T2Q6IF00 324 aa12.95□□□□□ -0.34
TPM1-207ENST00000403994 SPICQ8N5J4 248 aa12.95□□□□□ -0.34
TPM1-207ENST00000403994 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.95□□□□□ -0.34
TPM1-207ENST00000403994 OR52L1Q8NGH7 329 aa12.95□□□□□ -0.34
TPM1-207ENST00000403994 OR5L1Q8NGL2 311 aa12.95□□□□□ -0.34
TPM1-207ENST00000403994 GNPDA2Q8TDQ7 276 aa12.95□□□□□ -0.34
TPM1-207ENST00000403994 ST7LQ8TDW4 575 aa12.95□□□□□ -0.34
TPM1-207ENST00000403994 PTP4A1Q93096 173 aa12.95□□□□□ -0.34
TPM1-207ENST00000403994 ATF6BQ99941 703 aa12.95□□□□□ -0.34
TPM1-207ENST00000403994 PLA2G12AQ9BZM1 189 aa12.95□□□□□ -0.34
TPM1-207ENST00000403994 PNRC2Q9NPJ4 139 aaKnown RBP12.95□□□□□ -0.34
TPM1-207ENST00000403994 MRPL22Q9NWU5 206 aaKnown RBP12.95□□□□□ -0.34
TPM1-207ENST00000403994 ACTR3BQ9P1U1 418 aa12.95□□□□□ -0.34
TPM1-207ENST00000403994 CYB5R1Q9UHQ9 305 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms