RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 SPATS1Q496A3 300 aa4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 CCDC92Q53HC0 331 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 AVPI1Q5T686 147 aa4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 ZNF770Q6IQ21 691 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 ZNF620Q6ZNG0 422 aa4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 USP51Q70EK9 711 aa4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 ZNF771Q7L3S4 317 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 ADCK1Q86TW2 530 aa4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 HIPK1Q86Z02 1210 aa4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 LINC00346Q8IVM7 164 aa4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 OR6V1Q8N148 313 aa4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 CYB561A3Q8NBI2 242 aa4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 ZNF540Q8NDQ6 660 aa4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 OR52E2Q8NGJ4 325 aa4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 OR8D4Q8NGM9 314 aa4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 OR9Q1Q8NGQ5 310 aa4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 OR1F12Q8NHA8 337 aa4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 GNPDA2Q8TDQ7 276 aa4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 ZNRF4Q8WWF5 429 aa4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 RDH5Q92781 318 aa4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 THTPAQ9BU02 230 aa4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 LPAR2Q9HBW0 351 aa4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 MSL2Q9HCI7 577 aa4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 SLCO1C1Q9NYB5 712 aa4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 PLEK2Q9NYT0 353 aa4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 TREM2Q9NZC2 230 aa4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 NDRG4Q9ULP0 352 aaKnown RBP4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 B9D1Q9UPM9 204 aa4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 POLR1DQ9Y2S0 133 aa4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 STARD10Q9Y365 291 aa4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 GRIP1Q9Y3R0 1128 aa4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 LHFPL6Q9Y693 200 aa4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 CDH10Q9Y6N8 788 aa4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 ARHGAP32A7KAX9 2087 aa4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 IGHV1-69-2A0A0G2JMI3 117 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 MEGF11A6BM72 1044 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 OR6C6A6NF89 314 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 TVP23AA6NH52 213 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 A6NHS1 94 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 FAM157AC9JC47 383 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 ACOT8O14734 319 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 ARPC3O15145 178 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 TIMM8AO60220 97 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 RP2O75695 350 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 KRT36O76013 467 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 CCNB2O95067 398 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 IGHV1-46P01743 117 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 HLA-DQA2P01906 255 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 TFP02787 698 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 COX5BP10606 129 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 PSKH1P11801 424 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 ACHEP22303 614 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 CRABP1P29762 137 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 RPS27P42677 84 aaKnown RBP4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 MMP15P51511 669 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 HMGA2P52926 109 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 LSM6P62312 80 aaKnown RBP4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 HIST1H3AP68431 136 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 SRSF2Q01130 221 aaKnown RBP4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 TEKQ02763 1124 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 PSG7Q13046 419 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 AQP6Q13520 282 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 HLXQ14774 488 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 KCNMB1Q16558 191 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 FAM98BQ52LJ0 330 aaKnown RBP4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 MTX3Q5HYI7 312 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 HIST2H3PS2Q5TEC6 136 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 MBNL2Q5VZF2 373 aaKnown RBP4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 OR2T5Q6IEZ7 315 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 FAM166AQ6J272 317 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 DNM1P34Q6PK57 102 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 CFAP77Q6ZQR2 320 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 Q6ZR03 302 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 HIST2H3AQ71DI3 136 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 TRPM8Q7Z2W7 1104 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 TMEM179BQ7Z7N9 219 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 ADGRG5Q8IZF4 528 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 ARHGAP24Q8N264 748 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 IQCF1Q8N6M8 205 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 AQP11Q8NBQ7 271 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 NPEPL1Q8NDH3 523 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 SLC26A10Q8NG04 563 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 OR52L1Q8NGH7 329 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 OR51L1Q8NGJ5 315 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 OR2T29Q8NH02 315 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 OR4Q3Q8NH05 313 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 CLDND2Q8NHS1 167 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 BCAS4Q8TDM0 211 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 CANT1Q8WVQ1 401 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 CMBLQ96DG6 245 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 ASB9Q96DX5 294 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 LRGUKQ96M69 825 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 TSSK6Q9BXA6 273 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 BEX2Q9BXY8 128 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 TRIM15Q9C019 465 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 RACGAP1Q9H0H5 632 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 MUC13Q9H3R2 512 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 MAGIXQ9H6Y5 334 aa4.9□□□□□ -1.63
HMGB1P20-201ENST00000402555 REEP1Q9H902 201 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms