RNA–Protein interactions for RNA: ENST00000400068.7

SIRPA-203, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 4,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-203ENST00000400068 TOMM40LQ969M1 308 aa12.13□□□□□ -0.47
SIRPA-203ENST00000400068 KLHDC3Q9BQ90 382 aa12.13□□□□□ -0.47
SIRPA-203ENST00000400068 ZMIZ1Q9ULJ6 1067 aa12.13□□□□□ -0.47
SIRPA-203ENST00000400068 HIF3AQ9Y2N7 669 aa12.13□□□□□ -0.47
SIRPA-203ENST00000400068 TRAV8-7A0A075B6U6 113 aa12.13□□□□□ -0.47
SIRPA-203ENST00000400068 CER1O95813 267 aa12.13□□□□□ -0.47
SIRPA-203ENST00000400068 ADRB1P08588 477 aa12.13□□□□□ -0.47
SIRPA-203ENST00000400068 TMIGD3P0DMS9 266 aaPredicted RBP12.13□□□□□ -0.47
SIRPA-203ENST00000400068 CCR9P51686 369 aa12.13□□□□□ -0.47
SIRPA-203ENST00000400068 TNK1Q13470 666 aa12.13□□□□□ -0.47
SIRPA-203ENST00000400068 RABEPKQ7Z6M1 372 aa12.13□□□□□ -0.47
SIRPA-203ENST00000400068 ZNF721Q8TF20 911 aa12.13□□□□□ -0.47
SIRPA-203ENST00000400068 SNX18Q96RF0 628 aa12.13□□□□□ -0.47
SIRPA-203ENST00000400068 HRASLSQ9HDD0 168 aa12.13□□□□□ -0.47
SIRPA-203ENST00000400068 MAB21L2Q9Y586 359 aa12.13□□□□□ -0.47
SIRPA-203ENST00000400068 CDH23Q9H251 3354 aa12.13□□□□□ -0.47
SIRPA-203ENST00000400068 CCSO14618 274 aa12.13□□□□□ -0.47
SIRPA-203ENST00000400068 TIAF1O95411 115 aa12.13□□□□□ -0.47
SIRPA-203ENST00000400068 DDAH2O95865 285 aa12.13□□□□□ -0.47
SIRPA-203ENST00000400068 GNG10P50151 68 aa12.13□□□□□ -0.47
SIRPA-203ENST00000400068 EPHA4P54764 986 aa12.13□□□□□ -0.47
SIRPA-203ENST00000400068 TRAPPC6BQ86SZ2 158 aa12.13□□□□□ -0.47
SIRPA-203ENST00000400068 INO80EQ8NBZ0 244 aaPredicted RBP12.13□□□□□ -0.47
SIRPA-203ENST00000400068 NUDCD2Q8WVJ2 157 aa12.13□□□□□ -0.47
SIRPA-203ENST00000400068 OR2M2Q96R28 347 aa12.13□□□□□ -0.47
SIRPA-203ENST00000400068 URM1Q9BTM9 101 aaKnown RBP12.13□□□□□ -0.47
SIRPA-203ENST00000400068 NXF2Q9GZY0 626 aaKnown RBP12.13□□□□□ -0.47
SIRPA-203ENST00000400068 F8W036 122 aa12.12□□□□□ -0.47
SIRPA-203ENST00000400068 POU3F2P20265 443 aaPredicted RBP12.12□□□□□ -0.47
SIRPA-203ENST00000400068 EPHA8P29322 1005 aaPredicted RBP12.12□□□□□ -0.47
SIRPA-203ENST00000400068 BDKRB2P30411 391 aa12.12□□□□□ -0.47
SIRPA-203ENST00000400068 CLDN20P56880 219 aa12.12□□□□□ -0.47
SIRPA-203ENST00000400068 CSNK2A1P68400 391 aaPredicted RBP12.12□□□□□ -0.47
SIRPA-203ENST00000400068 GABREP78334 506 aa12.12□□□□□ -0.47
SIRPA-203ENST00000400068 CHRFAM7AQ494W8 412 aa12.12□□□□□ -0.47
SIRPA-203ENST00000400068 TMEM17Q86X19 198 aa12.12□□□□□ -0.47
SIRPA-203ENST00000400068 ADGRG3Q86Y34 549 aa12.12□□□□□ -0.47
SIRPA-203ENST00000400068 CSNK2A3Q8NEV1 391 aa12.12□□□□□ -0.47
SIRPA-203ENST00000400068 THAP6Q8TBB0 222 aa12.12□□□□□ -0.47
SIRPA-203ENST00000400068 MAFIPQ8WZ33 124 aa12.12□□□□□ -0.47
SIRPA-203ENST00000400068 CMBLQ96DG6 245 aa12.12□□□□□ -0.47
SIRPA-203ENST00000400068 HIST1H2AAQ96QV6 131 aa12.12□□□□□ -0.47
SIRPA-203ENST00000400068 LANCL2Q9NS86 450 aa12.12□□□□□ -0.47
SIRPA-203ENST00000400068 MRPS18AQ9NVS2 196 aaKnown RBP12.12□□□□□ -0.47
SIRPA-203ENST00000400068 TAS2R8Q9NYW2 309 aa12.12□□□□□ -0.47
SIRPA-203ENST00000400068 OR5V1Q9UGF6 321 aa12.12□□□□□ -0.47
SIRPA-203ENST00000400068 FARS2O95363 451 aaKnown RBP12.12□□□□□ -0.47
SIRPA-203ENST00000400068 CD3DP04234 171 aa12.12□□□□□ -0.47
SIRPA-203ENST00000400068 CD34P28906 385 aa12.12□□□□□ -0.47
SIRPA-203ENST00000400068 APOBEC1P41238 236 aaKnown RBP12.12□□□□□ -0.47
SIRPA-203ENST00000400068 FXYD4P59646 89 aa12.12□□□□□ -0.47
SIRPA-203ENST00000400068 SORDQ00796 357 aa12.12□□□□□ -0.47
SIRPA-203ENST00000400068 SPIN3Q5JUX0 258 aa12.12□□□□□ -0.47
SIRPA-203ENST00000400068 STEAP1BQ6NZ63 245 aa12.12□□□□□ -0.47
SIRPA-203ENST00000400068 ALKAL2Q6UX46 152 aa12.12□□□□□ -0.47
SIRPA-203ENST00000400068 OR52N5Q8NH56 324 aa12.12□□□□□ -0.47
SIRPA-203ENST00000400068 C11orf40Q8WZ69 217 aa12.12□□□□□ -0.47
SIRPA-203ENST00000400068 VRK1Q99986 396 aaPredicted RBP12.12□□□□□ -0.47
SIRPA-203ENST00000400068 VPS25Q9BRG1 176 aa12.12□□□□□ -0.47
SIRPA-203ENST00000400068 FANCMQ8IYD8 2048 aa12.12□□□□□ -0.47
SIRPA-203ENST00000400068 TCRBV16S1A1N1A0A5B0 115 aa12.12□□□□□ -0.47
SIRPA-203ENST00000400068 GLI4P10075 376 aa12.12□□□□□ -0.47
SIRPA-203ENST00000400068 PMPCAQ10713 525 aa12.12□□□□□ -0.47
SIRPA-203ENST00000400068 ABCA11PQ4W5N1 156 aa12.12□□□□□ -0.47
SIRPA-203ENST00000400068 DCAF12Q5T6F0 453 aa12.12□□□□□ -0.47
SIRPA-203ENST00000400068 MISPQ8IVT2 679 aa12.12□□□□□ -0.47
SIRPA-203ENST00000400068 D2HGDHQ8N465 521 aa12.12□□□□□ -0.47
SIRPA-203ENST00000400068 ST6GAL2Q96JF0 529 aa12.12□□□□□ -0.47
SIRPA-203ENST00000400068 ARRDC1-AS1Q9H2J1 176 aa12.12□□□□□ -0.47
SIRPA-203ENST00000400068 ACKR4Q9NPB9 350 aa12.12□□□□□ -0.47
SIRPA-203ENST00000400068 GLTPQ9NZD2 209 aa12.12□□□□□ -0.47
SIRPA-203ENST00000400068 ACACAQ13085 2346 aa12.12□□□□□ -0.47
SIRPA-203ENST00000400068 KANTRA0A1W2PQU2 76 aa12.11□□□□□ -0.47
SIRPA-203ENST00000400068 FAM166BA8MTA8 275 aa12.11□□□□□ -0.47
SIRPA-203ENST00000400068 SLC33A1O00400 549 aaPredicted RBP12.11□□□□□ -0.47
SIRPA-203ENST00000400068 CSF1P09603 554 aa12.11□□□□□ -0.47
SIRPA-203ENST00000400068 CD79AP11912 226 aa12.11□□□□□ -0.47
SIRPA-203ENST00000400068 ALOX5APP20292 161 aa12.11□□□□□ -0.47
SIRPA-203ENST00000400068 ZNF93P35789 620 aaPredicted RBP12.11□□□□□ -0.47
SIRPA-203ENST00000400068 HAGHLQ6PII5 290 aaPredicted RBP12.11□□□□□ -0.47
SIRPA-203ENST00000400068 C17orf107Q6ZR85 190 aa12.11□□□□□ -0.47
SIRPA-203ENST00000400068 P4HA3Q7Z4N8 544 aa12.11□□□□□ -0.47
SIRPA-203ENST00000400068 INTS12Q96CB8 462 aaKnown RBP12.11□□□□□ -0.47
SIRPA-203ENST00000400068 OR8B4Q96RC9 309 aa12.11□□□□□ -0.47
SIRPA-203ENST00000400068 CHRDQ9H2X0 955 aa12.11□□□□□ -0.47
SIRPA-203ENST00000400068 PLXNB3Q9ULL4 1909 aa12.11□□□□□ -0.47
SIRPA-203ENST00000400068 PRUNE2Q8WUY3 3088 aa12.11□□□□□ -0.47
SIRPA-203ENST00000400068 TRBV23-1A0A0A0MS06 115 aa12.11□□□□□ -0.47
SIRPA-203ENST00000400068 IGHV3-64DA0A0J9YX35 117 aa12.11□□□□□ -0.47
SIRPA-203ENST00000400068 A0A1W2PR77 199 aa12.11□□□□□ -0.47
SIRPA-203ENST00000400068 F5H0A9 414 aaPredicted RBP12.11□□□□□ -0.47
SIRPA-203ENST00000400068 GABARAPH6UMI1 98 aa12.11□□□□□ -0.47
SIRPA-203ENST00000400068 RER1O15258 196 aa12.11□□□□□ -0.47
SIRPA-203ENST00000400068 HLA-AP01891 365 aaKnown RBP12.11□□□□□ -0.47
SIRPA-203ENST00000400068 ERCC1P07992 297 aaPredicted RBP12.11□□□□□ -0.47
SIRPA-203ENST00000400068 ZNF35P13682 527 aa12.11□□□□□ -0.47
SIRPA-203ENST00000400068 LAP3P28838 519 aa12.11□□□□□ -0.47
SIRPA-203ENST00000400068 FOXK1P85037 733 aa12.11□□□□□ -0.47
SIRPA-203ENST00000400068 LINC00303Q3SY05 128 aa12.11□□□□□ -0.47
SIRPA-203ENST00000400068 B3GNTL1Q67FW5 361 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms