RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 CR1LQ2VPA4 569 aa12.63□□□□□ -0.39
SMIM11A-203ENST00000399299 CXXC5Q7LFL8 322 aaKnown RBP12.63□□□□□ -0.39
SMIM11A-203ENST00000399299 OR52E2Q8NGJ4 325 aa12.63□□□□□ -0.39
SMIM11A-203ENST00000399299 OR5L1Q8NGL2 311 aa12.63□□□□□ -0.39
SMIM11A-203ENST00000399299 SLC7A6Q92536 515 aa12.63□□□□□ -0.39
SMIM11A-203ENST00000399299 HAVCR1Q96D42 359 aa12.63□□□□□ -0.39
SMIM11A-203ENST00000399299 DGCR6LQ9BY27 220 aa12.63□□□□□ -0.39
SMIM11A-203ENST00000399299 POFUT1Q9H488 388 aa12.63□□□□□ -0.39
SMIM11A-203ENST00000399299 NARFLQ9H6Q4 476 aa12.63□□□□□ -0.39
SMIM11A-203ENST00000399299 REEP1Q9H902 201 aa12.63□□□□□ -0.39
SMIM11A-203ENST00000399299 KCNG2Q9UJ96 466 aa12.63□□□□□ -0.39
SMIM11A-203ENST00000399299 PURGQ9UJV8 347 aaKnown RBP12.63□□□□□ -0.39
SMIM11A-203ENST00000399299 SAMHD1Q9Y3Z3 626 aaKnown RBP12.63□□□□□ -0.39
SMIM11A-203ENST00000399299 UBOX5O94941 541 aa12.62□□□□□ -0.39
SMIM11A-203ENST00000399299 GASTP01350 101 aa12.62□□□□□ -0.39
SMIM11A-203ENST00000399299 DBHP09172 617 aa12.62□□□□□ -0.39
SMIM11A-203ENST00000399299 RAP2AP10114 183 aa12.62□□□□□ -0.39
SMIM11A-203ENST00000399299 RAC2P15153 192 aa12.62□□□□□ -0.39
SMIM11A-203ENST00000399299 HOXB6P17509 224 aaKnown RBP12.62□□□□□ -0.39
SMIM11A-203ENST00000399299 SLC3A1Q07837 685 aa12.62□□□□□ -0.39
SMIM11A-203ENST00000399299 TRAP1Q12931 704 aaKnown RBP12.62□□□□□ -0.39
SMIM11A-203ENST00000399299 ECH1Q13011 328 aa12.62□□□□□ -0.39
SMIM11A-203ENST00000399299 MICAQ29983 383 aa12.62□□□□□ -0.39
SMIM11A-203ENST00000399299 CLEC12AQ5QGZ9 265 aa12.62□□□□□ -0.39
SMIM11A-203ENST00000399299 SLC18B1Q6NT16 456 aa12.62□□□□□ -0.39
SMIM11A-203ENST00000399299 FBXW12Q6X9E4 464 aa12.62□□□□□ -0.39
SMIM11A-203ENST00000399299 TRPM8Q7Z2W7 1104 aa12.62□□□□□ -0.39
SMIM11A-203ENST00000399299 GLCCI1Q86VQ1 547 aa12.62□□□□□ -0.39
SMIM11A-203ENST00000399299 LNX2Q8N448 690 aa12.62□□□□□ -0.39
SMIM11A-203ENST00000399299 AQP11Q8NBQ7 271 aa12.62□□□□□ -0.39
SMIM11A-203ENST00000399299 OR8D4Q8NGM9 314 aa12.62□□□□□ -0.39
SMIM11A-203ENST00000399299 PTP4A1Q93096 173 aa12.62□□□□□ -0.39
SMIM11A-203ENST00000399299 APOBEC3DQ96AK3 386 aaPredicted RBP12.62□□□□□ -0.39
SMIM11A-203ENST00000399299 CCDC124Q96CT7 223 aaKnown RBP12.62□□□□□ -0.39
SMIM11A-203ENST00000399299 TIMD4Q96H15 378 aa12.62□□□□□ -0.39
SMIM11A-203ENST00000399299 LRGUKQ96M69 825 aa12.62□□□□□ -0.39
SMIM11A-203ENST00000399299 DDOQ99489 341 aa12.62□□□□□ -0.39
SMIM11A-203ENST00000399299 PLA2G12AQ9BZM1 189 aa12.62□□□□□ -0.39
SMIM11A-203ENST00000399299 FN3KQ9H479 309 aa12.62□□□□□ -0.39
SMIM11A-203ENST00000399299 MSL2Q9HCI7 577 aa12.62□□□□□ -0.39
SMIM11A-203ENST00000399299 VNN3Q9NY84 501 aa12.62□□□□□ -0.39
SMIM11A-203ENST00000399299 TREM2Q9NZC2 230 aa12.62□□□□□ -0.39
SMIM11A-203ENST00000399299 CYB5R1Q9UHQ9 305 aa12.62□□□□□ -0.39
SMIM11A-203ENST00000399299 TMEFF2Q9UIK5 374 aaPredicted RBP12.62□□□□□ -0.39
SMIM11A-203ENST00000399299 BAIAP2Q9UQB8 552 aa12.62□□□□□ -0.39
SMIM11A-203ENST00000399299 WIPI2Q9Y4P8 454 aa12.62□□□□□ -0.39
SMIM11A-203ENST00000399299 FAM157AC9JC47 383 aa12.61□□□□□ -0.39
SMIM11A-203ENST00000399299 ACOT8O14734 319 aa12.61□□□□□ -0.39
SMIM11A-203ENST00000399299 MSMBP08118 114 aa12.61□□□□□ -0.39
SMIM11A-203ENST00000399299 TNFSF4P23510 183 aa12.61□□□□□ -0.39
SMIM11A-203ENST00000399299 GGT2P36268 569 aa12.61□□□□□ -0.39
SMIM11A-203ENST00000399299 KRTAP27-1Q3LI81 207 aa12.61□□□□□ -0.39
SMIM11A-203ENST00000399299 SLC35F1Q5T1Q4 408 aa12.61□□□□□ -0.39
SMIM11A-203ENST00000399299 CORO6Q6QEF8 472 aa12.61□□□□□ -0.39
SMIM11A-203ENST00000399299 COLCA1Q6ZS62 124 aa12.61□□□□□ -0.39
SMIM11A-203ENST00000399299 IL17RELQ6ZVW7 336 aa12.61□□□□□ -0.39
SMIM11A-203ENST00000399299 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.61□□□□□ -0.39
SMIM11A-203ENST00000399299 OR2T4Q8NH00 348 aa12.61□□□□□ -0.39
SMIM11A-203ENST00000399299 OR51F2Q8NH61 342 aa12.61□□□□□ -0.39
SMIM11A-203ENST00000399299 RAB1CQ92928 201 aa12.61□□□□□ -0.39
SMIM11A-203ENST00000399299 RAB39BQ96DA2 213 aa12.61□□□□□ -0.39
SMIM11A-203ENST00000399299 CMBLQ96DG6 245 aa12.61□□□□□ -0.39
SMIM11A-203ENST00000399299 CLPTM1LQ96KA5 538 aa12.61□□□□□ -0.39
SMIM11A-203ENST00000399299 TBC1D23Q9NUY8 699 aa12.61□□□□□ -0.39
SMIM11A-203ENST00000399299 MRPL22Q9NWU5 206 aaKnown RBP12.61□□□□□ -0.39
SMIM11A-203ENST00000399299 CACNG2Q9Y698 323 aa12.61□□□□□ -0.39
SMIM11A-203ENST00000399299 ARRDC5A6NEK1 342 aa12.6□□□□□ -0.39
SMIM11A-203ENST00000399299 AQP12BA6NM10 295 aa12.6□□□□□ -0.39
SMIM11A-203ENST00000399299 HLA-DQA2P01906 255 aa12.6□□□□□ -0.39
SMIM11A-203ENST00000399299 ANPEPP15144 967 aa12.6□□□□□ -0.39
SMIM11A-203ENST00000399299 TNFRSF1AP19438 455 aa12.6□□□□□ -0.39
SMIM11A-203ENST00000399299 TNFAIP6P98066 277 aaPredicted RBP12.6□□□□□ -0.39
SMIM11A-203ENST00000399299 MVKQ03426 396 aa12.6□□□□□ -0.39
SMIM11A-203ENST00000399299 PPP1R8Q12972 351 aaKnown RBP12.6□□□□□ -0.39
SMIM11A-203ENST00000399299 RSPO1Q2MKA7 263 aaPredicted RBP12.6□□□□□ -0.39
SMIM11A-203ENST00000399299 DNAL1Q4LDG9 190 aa12.6□□□□□ -0.39
SMIM11A-203ENST00000399299 ZNF362Q5T0B9 420 aaPredicted RBP12.6□□□□□ -0.39
SMIM11A-203ENST00000399299 AVPI1Q5T686 147 aa12.6□□□□□ -0.39
SMIM11A-203ENST00000399299 CD300LDQ6UXZ3 194 aa12.6□□□□□ -0.39
SMIM11A-203ENST00000399299 CFAP77Q6ZQR2 320 aa12.6□□□□□ -0.39
SMIM11A-203ENST00000399299 Q6ZR03 302 aa12.6□□□□□ -0.39
SMIM11A-203ENST00000399299 AQP12AQ8IXF9 295 aa12.6□□□□□ -0.39
SMIM11A-203ENST00000399299 ADGRG5Q8IZF4 528 aa12.6□□□□□ -0.39
SMIM11A-203ENST00000399299 OR2T33Q8NG76 320 aa12.6□□□□□ -0.39
SMIM11A-203ENST00000399299 OR2AJ1Q8NGZ0 328 aa12.6□□□□□ -0.39
SMIM11A-203ENST00000399299 SPATA3Q8NHX4 192 aa12.6□□□□□ -0.39
SMIM11A-203ENST00000399299 BCAS4Q8TDM0 211 aa12.6□□□□□ -0.39
SMIM11A-203ENST00000399299 CCL17Q92583 94 aa12.6□□□□□ -0.39
SMIM11A-203ENST00000399299 TMEM186Q96B77 213 aa12.6□□□□□ -0.39
SMIM11A-203ENST00000399299 PITX2Q99697 317 aa12.6□□□□□ -0.39
SMIM11A-203ENST00000399299 ATF6BQ99941 703 aa12.6□□□□□ -0.39
SMIM11A-203ENST00000399299 THTPAQ9BU02 230 aa12.6□□□□□ -0.39
SMIM11A-203ENST00000399299 CDADC1Q9BWV3 514 aa12.6□□□□□ -0.39
SMIM11A-203ENST00000399299 TSSK6Q9BXA6 273 aa12.6□□□□□ -0.39
SMIM11A-203ENST00000399299 C1QTNF5Q9BXJ0 243 aa12.6□□□□□ -0.39
SMIM11A-203ENST00000399299 ZNF665Q9H7R5 613 aa12.6□□□□□ -0.39
SMIM11A-203ENST00000399299 PNRC2Q9NPJ4 139 aaKnown RBP12.6□□□□□ -0.39
SMIM11A-203ENST00000399299 IL19Q9UHD0 177 aa12.6□□□□□ -0.39
SMIM11A-203ENST00000399299 U3KQV3 271 aa12.6□□□□□ -0.39
SMIM11A-203ENST00000399299 DYSFO75923 2080 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms