RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 SFXN2Q96NB2 322 aa13.45□□□□□ -0.26
COL25A1-201ENST00000399126 ZNF385AQ96PM9 386 aaKnown RBP13.45□□□□□ -0.26
COL25A1-201ENST00000399126 ABHD6Q9BV23 337 aa13.45□□□□□ -0.26
COL25A1-201ENST00000399126 ELOVL3Q9HB03 270 aa13.45□□□□□ -0.26
COL25A1-201ENST00000399126 AUP1Q9Y679 476 aa13.45□□□□□ -0.26
COL25A1-201ENST00000399126 GALP22466 123 aa13.45□□□□□ -0.26
COL25A1-201ENST00000399126 CLDN15P56746 228 aa13.45□□□□□ -0.26
COL25A1-201ENST00000399126 CLDN17P56750 224 aa13.45□□□□□ -0.26
COL25A1-201ENST00000399126 EIF2B1Q14232 305 aaKnown RBP13.45□□□□□ -0.26
COL25A1-201ENST00000399126 CREB3L2Q70SY1 520 aa13.45□□□□□ -0.26
COL25A1-201ENST00000399126 OR10AC1Q8NH08 325 aa13.45□□□□□ -0.26
COL25A1-201ENST00000399126 RPS4Y2Q8TD47 263 aa13.45□□□□□ -0.26
COL25A1-201ENST00000399126 C12orf57Q99622 126 aa13.45□□□□□ -0.26
COL25A1-201ENST00000399126 ATF6BQ99941 703 aa13.45□□□□□ -0.26
COL25A1-201ENST00000399126 DLL3Q9NYJ7 618 aa13.45□□□□□ -0.26
COL25A1-201ENST00000399126 COMMD3Q9UBI1 195 aa13.45□□□□□ -0.26
COL25A1-201ENST00000399126 CBY1Q9Y3M2 126 aa13.45□□□□□ -0.26
COL25A1-201ENST00000399126 FAM166BA8MTA8 275 aa13.44□□□□□ -0.26
COL25A1-201ENST00000399126 CLRN1P58418 232 aa13.44□□□□□ -0.26
COL25A1-201ENST00000399126 PLXDC2Q6UX71 529 aa13.44□□□□□ -0.26
COL25A1-201ENST00000399126 PRSS35Q8N3Z0 413 aa13.44□□□□□ -0.26
COL25A1-201ENST00000399126 MS4A15Q8N5U1 240 aa13.44□□□□□ -0.26
COL25A1-201ENST00000399126 NOXO1Q8NFA2 376 aa13.44□□□□□ -0.26
COL25A1-201ENST00000399126 OR4M2Q8NGB6 313 aa13.44□□□□□ -0.26
COL25A1-201ENST00000399126 ST8SIA2Q92186 375 aa13.44□□□□□ -0.26
COL25A1-201ENST00000399126 SLC25A44Q96H78 314 aaPredicted RBP13.44□□□□□ -0.26
COL25A1-201ENST00000399126 FER1L6-AS2Q96M78 137 aa13.44□□□□□ -0.26
COL25A1-201ENST00000399126 OR8B4Q96RC9 309 aa13.44□□□□□ -0.26
COL25A1-201ENST00000399126 B3GAT2Q9NPZ5 323 aa13.44□□□□□ -0.26
COL25A1-201ENST00000399126 ATMQ13315 3056 aa13.44□□□□□ -0.26
COL25A1-201ENST00000399126 TRABD2BA6NFA1 517 aa13.44□□□□□ -0.26
COL25A1-201ENST00000399126 ANKRD61A6NGH8 418 aa13.44□□□□□ -0.26
COL25A1-201ENST00000399126 PNPP00491 289 aa13.44□□□□□ -0.26
COL25A1-201ENST00000399126 PF4V1P10720 104 aa13.44□□□□□ -0.26
COL25A1-201ENST00000399126 CSRP1P21291 193 aaKnown RBP13.44□□□□□ -0.26
COL25A1-201ENST00000399126 CASRP41180 1078 aa13.44□□□□□ -0.26
COL25A1-201ENST00000399126 CAPZA2P47755 286 aa13.44□□□□□ -0.26
COL25A1-201ENST00000399126 EGR3Q06889 387 aa13.44□□□□□ -0.26
COL25A1-201ENST00000399126 ZNF239Q16600 458 aaKnown RBP13.44□□□□□ -0.26
COL25A1-201ENST00000399126 MRPL48Q96GC5 212 aaKnown RBP13.44□□□□□ -0.26
COL25A1-201ENST00000399126 SDHCQ99643 169 aaPredicted RBP13.44□□□□□ -0.26
COL25A1-201ENST00000399126 SLC6A15Q9H2J7 730 aa13.44□□□□□ -0.26
COL25A1-201ENST00000399126 FBXL3Q9UKT7 428 aa13.44□□□□□ -0.26
COL25A1-201ENST00000399126 TMEM14AQ9Y6G1 99 aa13.44□□□□□ -0.26
COL25A1-201ENST00000399126 F8W036 122 aa13.43□□□□□ -0.26
COL25A1-201ENST00000399126 SMAD9O15198 467 aaKnown RBP13.43□□□□□ -0.26
COL25A1-201ENST00000399126 PIN1P1O15428 100 aa13.43□□□□□ -0.26
COL25A1-201ENST00000399126 DOK2O60496 412 aa13.43□□□□□ -0.26
COL25A1-201ENST00000399126 KHDRBS3O75525 346 aaKnown RBP13.43□□□□□ -0.26
COL25A1-201ENST00000399126 IGHG1P01857 330 aa13.43□□□□□ -0.26
COL25A1-201ENST00000399126 FKBP2P26885 142 aaKnown RBP13.43□□□□□ -0.26
COL25A1-201ENST00000399126 EIF1AXP47813 144 aaKnown RBP13.43□□□□□ -0.26
COL25A1-201ENST00000399126 MTNR1BP49286 362 aa13.43□□□□□ -0.26
COL25A1-201ENST00000399126 ALKBH1Q13686 389 aaKnown RBP13.43□□□□□ -0.26
COL25A1-201ENST00000399126 SLC25A35Q3KQZ1 300 aa13.43□□□□□ -0.26
COL25A1-201ENST00000399126 SPANXN2Q5MJ10 180 aa13.43□□□□□ -0.26
COL25A1-201ENST00000399126 SLC18B1Q6NT16 456 aa13.43□□□□□ -0.26
COL25A1-201ENST00000399126 RHOUQ7L0Q8 258 aa13.43□□□□□ -0.26
COL25A1-201ENST00000399126 DCXRQ7Z4W1 244 aa13.43□□□□□ -0.26
COL25A1-201ENST00000399126 LIX1LQ8IVB5 337 aa13.43□□□□□ -0.26
COL25A1-201ENST00000399126 OR4M1Q8NGD0 313 aa13.43□□□□□ -0.26
COL25A1-201ENST00000399126 OR51A4Q8NGJ6 313 aa13.43□□□□□ -0.26
COL25A1-201ENST00000399126 OR2G2Q8NGZ5 317 aa13.43□□□□□ -0.26
COL25A1-201ENST00000399126 DEDD2Q8WXF8 326 aa13.43□□□□□ -0.26
COL25A1-201ENST00000399126 C11orf40Q8WZ69 217 aa13.43□□□□□ -0.26
COL25A1-201ENST00000399126 SLC30A2Q9BRI3 323 aa13.43□□□□□ -0.26
COL25A1-201ENST00000399126 ZNF703Q9H7S9 590 aaPredicted RBP13.43□□□□□ -0.26
COL25A1-201ENST00000399126 EMC7Q9NPA0 242 aa13.43□□□□□ -0.26
COL25A1-201ENST00000399126 BRD7Q9NPI1 651 aa13.43□□□□□ -0.26
COL25A1-201ENST00000399126 CMAHPQ9Y471 501 aa13.43□□□□□ -0.26
COL25A1-201ENST00000399126 CSAG2Q9Y5P2 127 aa13.43□□□□□ -0.26
COL25A1-201ENST00000399126 V9GYH0 126 aa13.43□□□□□ -0.26
COL25A1-201ENST00000399126 A0A0G2JK05 382 aa13.43□□□□□ -0.26
COL25A1-201ENST00000399126 A0A1W2PPL8 197 aa13.43□□□□□ -0.26
COL25A1-201ENST00000399126 TACSTD2P09758 323 aa13.43□□□□□ -0.26
COL25A1-201ENST00000399126 LIPCP11150 499 aa13.43□□□□□ -0.26
COL25A1-201ENST00000399126 AZGP1P25311 298 aaKnown RBP13.43□□□□□ -0.26
COL25A1-201ENST00000399126 CD82P27701 267 aa13.43□□□□□ -0.26
COL25A1-201ENST00000399126 KIR3DL2P43630 455 aa13.43□□□□□ -0.26
COL25A1-201ENST00000399126 HOXA1P49639 335 aaPredicted RBP13.43□□□□□ -0.26
COL25A1-201ENST00000399126 MFGE8Q08431 387 aaPredicted RBP13.43□□□□□ -0.26
COL25A1-201ENST00000399126 SLC17A1Q14916 467 aa13.43□□□□□ -0.26
COL25A1-201ENST00000399126 TRAM1Q15629 374 aa13.43□□□□□ -0.26
COL25A1-201ENST00000399126 PHYHD1Q5SRE7 291 aa13.43□□□□□ -0.26
COL25A1-201ENST00000399126 ZBTB37Q5TC79 503 aa13.43□□□□□ -0.26
COL25A1-201ENST00000399126 OR6X1Q8NH79 312 aa13.43□□□□□ -0.26
COL25A1-201ENST00000399126 IP6K3Q96PC2 410 aa13.43□□□□□ -0.26
COL25A1-201ENST00000399126 RBP7Q96R05 134 aa13.43□□□□□ -0.26
COL25A1-201ENST00000399126 PRRX2Q99811 253 aa13.43□□□□□ -0.26
COL25A1-201ENST00000399126 FAM173AQ9BQD7 235 aa13.43□□□□□ -0.26
COL25A1-201ENST00000399126 TMUB1Q9BVT8 246 aa13.43□□□□□ -0.26
COL25A1-201ENST00000399126 SLC25A18Q9H1K4 315 aa13.43□□□□□ -0.26
COL25A1-201ENST00000399126 NOX4Q9NPH5 578 aa13.43□□□□□ -0.26
COL25A1-201ENST00000399126 SLC22A13Q9Y226 551 aa13.43□□□□□ -0.26
COL25A1-201ENST00000399126 ZNF281Q9Y2X9 895 aa13.43□□□□□ -0.26
COL25A1-201ENST00000399126 SLC2A2P11168 524 aaPredicted RBP13.42□□□□□ -0.26
COL25A1-201ENST00000399126 CEACAM1P13688 526 aa13.42□□□□□ -0.26
COL25A1-201ENST00000399126 ZNF250P15622 560 aa13.42□□□□□ -0.26
COL25A1-201ENST00000399126 MAGEA5P43359 124 aa13.42□□□□□ -0.26
COL25A1-201ENST00000399126 WDR38Q5JTN6 314 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms