RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 GDF2Q9UK05 429 aaPredicted RBP22.85■■□□□ 1.25
COL13A1-203ENST00000398969 MKL2Q9ULH7 1088 aa22.85■■□□□ 1.25
COL13A1-203ENST00000398969 MGMTP16455 207 aa22.84■■□□□ 1.25
COL13A1-203ENST00000398969 AGTR1P30556 359 aa22.84■■□□□ 1.25
COL13A1-203ENST00000398969 ZNF584Q8IVC4 421 aa22.84■■□□□ 1.25
COL13A1-203ENST00000398969 EIF4E3Q8N5X7 224 aaKnown RBP22.84■■□□□ 1.25
COL13A1-203ENST00000398969 ST8SIA4Q92187 359 aa22.84■■□□□ 1.25
COL13A1-203ENST00000398969 AQP3Q92482 292 aa22.84■■□□□ 1.25
COL13A1-203ENST00000398969 NPAS1Q99742 590 aa22.84■■□□□ 1.25
COL13A1-203ENST00000398969 B3GNT4Q9C0J1 378 aa22.84■■□□□ 1.25
COL13A1-203ENST00000398969 GPR160Q9UJ42 338 aa22.84■■□□□ 1.25
COL13A1-203ENST00000398969 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa22.84■■□□□ 1.25
COL13A1-203ENST00000398969 WIPF3A6NGB9 483 aa22.84■■□□□ 1.25
COL13A1-203ENST00000398969 OR6C76A6NM76 312 aa22.84■■□□□ 1.25
COL13A1-203ENST00000398969 P2RY10O00398 339 aa22.84■■□□□ 1.25
COL13A1-203ENST00000398969 RAB6AP20340 208 aa22.84■■□□□ 1.25
COL13A1-203ENST00000398969 BCKDHBP21953 392 aa22.84■■□□□ 1.25
COL13A1-203ENST00000398969 CD34P28906 385 aa22.84■■□□□ 1.25
COL13A1-203ENST00000398969 SRSF4Q08170 494 aaKnown RBP22.84■■□□□ 1.25
COL13A1-203ENST00000398969 C1orf189Q5VU69 101 aa22.84■■□□□ 1.25
COL13A1-203ENST00000398969 TMEM244Q5VVB8 128 aa22.84■■□□□ 1.25
COL13A1-203ENST00000398969 DNM1P34Q6PK57 102 aa22.84■■□□□ 1.25
COL13A1-203ENST00000398969 MS4A7Q9GZW8 240 aaPredicted RBP22.84■■□□□ 1.25
COL13A1-203ENST00000398969 SPAG17Q6Q759 2223 aa22.84■■□□□ 1.25
COL13A1-203ENST00000398969 CEP192Q8TEP8 1941 aa22.84■■□□□ 1.25
COL13A1-203ENST00000398969 RP1P56715 2156 aa22.83■■□□□ 1.25
COL13A1-203ENST00000398969 OR5H14A6NHG9 310 aa22.83■■□□□ 1.25
COL13A1-203ENST00000398969 D6RAR5 112 aa22.83■■□□□ 1.25
COL13A1-203ENST00000398969 CSN2P05814 226 aa22.83■■□□□ 1.25
COL13A1-203ENST00000398969 UBBP0CG47 229 aa22.83■■□□□ 1.25
COL13A1-203ENST00000398969 UBCP0CG48 685 aaKnown RBP22.83■■□□□ 1.25
COL13A1-203ENST00000398969 ATF4P18848 351 aaPredicted RBP22.83■■□□□ 1.25
COL13A1-203ENST00000398969 HNRNPKP61978 463 aaKnown RBP eCLIP22.83■■□□□ 1.25
COL13A1-203ENST00000398969 RPS27AP62979 156 aaKnown RBP22.83■■□□□ 1.25
COL13A1-203ENST00000398969 UBA52P62987 128 aaKnown RBP22.83■■□□□ 1.25
COL13A1-203ENST00000398969 FGL1Q08830 312 aa22.83■■□□□ 1.25
COL13A1-203ENST00000398969 OGFOD3Q6PK18 319 aa22.83■■□□□ 1.25
COL13A1-203ENST00000398969 LANCL3Q6ZV70 420 aa22.83■■□□□ 1.25
COL13A1-203ENST00000398969 STPG2Q8N412 459 aa22.83■■□□□ 1.25
COL13A1-203ENST00000398969 ST8SIA2Q92186 375 aa22.83■■□□□ 1.25
COL13A1-203ENST00000398969 SLC25A32Q9H2D1 315 aa22.83■■□□□ 1.25
COL13A1-203ENST00000398969 VSIG4Q9Y279 399 aa22.83■■□□□ 1.25
COL13A1-203ENST00000398969 IGKV1D-43A0A0B4J1Z2 117 aa22.83■■□□□ 1.24
COL13A1-203ENST00000398969 NPIPA5E9PKD4 350 aa22.83■■□□□ 1.24
COL13A1-203ENST00000398969 TRIM77I1YAP6 450 aa22.83■■□□□ 1.24
COL13A1-203ENST00000398969 SMAD9O15198 467 aaKnown RBP22.83■■□□□ 1.24
COL13A1-203ENST00000398969 NAGAP17050 411 aa22.83■■□□□ 1.24
COL13A1-203ENST00000398969 CSNK1EP49674 416 aaKnown RBP22.83■■□□□ 1.24
COL13A1-203ENST00000398969 OR1D5P58170 312 aa22.83■■□□□ 1.24
COL13A1-203ENST00000398969 MEF2DQ14814 521 aa22.83■■□□□ 1.24
COL13A1-203ENST00000398969 NKPD1Q17RQ9 610 aa22.83■■□□□ 1.24
COL13A1-203ENST00000398969 LPCAT3Q6P1A2 487 aa22.83■■□□□ 1.24
COL13A1-203ENST00000398969 RELL2Q8NC24 303 aaPredicted RBP22.83■■□□□ 1.24
COL13A1-203ENST00000398969 NKD1Q969G9 470 aa22.83■■□□□ 1.24
COL13A1-203ENST00000398969 FOXRED1Q96CU9 486 aaPredicted RBP22.83■■□□□ 1.24
COL13A1-203ENST00000398969 KCNK17Q96T54 332 aa22.83■■□□□ 1.24
COL13A1-203ENST00000398969 NPIPA1Q9UND3 350 aa22.83■■□□□ 1.24
COL13A1-203ENST00000398969 A0A0D9SG52 128 aa22.82■■□□□ 1.24
COL13A1-203ENST00000398969 OR14I1A6ND48 311 aa22.82■■□□□ 1.24
COL13A1-203ENST00000398969 DISC1C4P0D8 188 aa22.82■■□□□ 1.24
COL13A1-203ENST00000398969 LMO7DNF2Z398 122 aa22.82■■□□□ 1.24
COL13A1-203ENST00000398969 HLA-AP01891 365 aaKnown RBP22.82■■□□□ 1.24
COL13A1-203ENST00000398969 ZP4Q12836 540 aa22.82■■□□□ 1.24
COL13A1-203ENST00000398969 PHF19Q5T6S3 580 aa22.82■■□□□ 1.24
COL13A1-203ENST00000398969 DEGS2Q6QHC5 323 aa22.82■■□□□ 1.24
COL13A1-203ENST00000398969 TMEM234Q8WY98 164 aa22.82■■□□□ 1.24
COL13A1-203ENST00000398969 ARL5BQ96KC2 179 aa22.82■■□□□ 1.24
COL13A1-203ENST00000398969 CNTD2Q9H8S5 307 aa22.82■■□□□ 1.24
COL13A1-203ENST00000398969 NOP16Q9Y3C1 178 aaKnown RBP22.82■■□□□ 1.24
COL13A1-203ENST00000398969 SEC16AO15027 2179 aa22.82■■□□□ 1.24
COL13A1-203ENST00000398969 DCNP07585 359 aaKnown RBP22.82■■□□□ 1.24
COL13A1-203ENST00000398969 FOLR1P15328 257 aa22.82■■□□□ 1.24
COL13A1-203ENST00000398969 CXCL12P48061 93 aa22.82■■□□□ 1.24
COL13A1-203ENST00000398969 DAP3P51398 398 aaKnown RBP22.82■■□□□ 1.24
COL13A1-203ENST00000398969 OR7A5Q15622 319 aa22.82■■□□□ 1.24
COL13A1-203ENST00000398969 ZNF260Q3ZCT1 412 aa22.82■■□□□ 1.24
COL13A1-203ENST00000398969 CD163Q86VB7 1156 aa22.82■■□□□ 1.24
COL13A1-203ENST00000398969 FJX1Q86VR8 437 aa22.82■■□□□ 1.24
COL13A1-203ENST00000398969 OR6S1Q8NH40 331 aa22.82■■□□□ 1.24
COL13A1-203ENST00000398969 SLC2A8Q9NY64 477 aa22.82■■□□□ 1.24
COL13A1-203ENST00000398969 GPN3Q9UHW5 284 aaPredicted RBP22.82■■□□□ 1.24
COL13A1-203ENST00000398969 RAB22AQ9UL26 194 aa22.82■■□□□ 1.24
COL13A1-203ENST00000398969 METTL21EPA6NDL7 271 aa22.81■■□□□ 1.24
COL13A1-203ENST00000398969 K7ESF4 209 aa22.81■■□□□ 1.24
COL13A1-203ENST00000398969 RAB27BO00194 218 aa22.81■■□□□ 1.24
COL13A1-203ENST00000398969 H2BFMP0C1H6 154 aa22.81■■□□□ 1.24
COL13A1-203ENST00000398969 LIPCP11150 499 aa22.81■■□□□ 1.24
COL13A1-203ENST00000398969 RGS19P49795 217 aa22.81■■□□□ 1.24
COL13A1-203ENST00000398969 CAPZA1P52907 286 aa22.81■■□□□ 1.24
COL13A1-203ENST00000398969 TFAP2EQ6VUC0 442 aa22.81■■□□□ 1.24
COL13A1-203ENST00000398969 KCNRGQ8N5I3 272 aa22.81■■□□□ 1.24
COL13A1-203ENST00000398969 ZBTB8AQ96BR9 441 aa22.81■■□□□ 1.24
COL13A1-203ENST00000398969 PRRT1Q99946 306 aa22.81■■□□□ 1.24
COL13A1-203ENST00000398969 CENPMQ9NSP4 180 aa22.81■■□□□ 1.24
COL13A1-203ENST00000398969 CFHR1Q03591 330 aa22.8■■□□□ 1.24
COL13A1-203ENST00000398969 CDNFQ49AH0 187 aa22.8■■□□□ 1.24
COL13A1-203ENST00000398969 RNASE10Q5GAN6 216 aaKnown RBP22.8■■□□□ 1.24
COL13A1-203ENST00000398969 RAB12Q6IQ22 244 aa22.8■■□□□ 1.24
COL13A1-203ENST00000398969 ZNF813Q6ZN06 617 aa22.8■■□□□ 1.24
COL13A1-203ENST00000398969 C16orf47Q6ZP98 133 aaPredicted RBP22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms