RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 GAL3ST1Q99999 423 aa12.32□□□□□ -0.44
PRAME-202ENST00000398743 GDF2Q9UK05 429 aaPredicted RBP12.32□□□□□ -0.44
PRAME-202ENST00000398743 U3KQ87 197 aa12.32□□□□□ -0.44
PRAME-202ENST00000398743 CFAP54Q96N23 3096 aa12.32□□□□□ -0.44
PRAME-202ENST00000398743 FREM3P0C091 2139 aa12.31□□□□□ -0.44
PRAME-202ENST00000398743 ZNF878C9JN71 531 aa12.31□□□□□ -0.44
PRAME-202ENST00000398743 G3V3Q6 166 aa12.31□□□□□ -0.44
PRAME-202ENST00000398743 CELA2AP08217 269 aa12.31□□□□□ -0.44
PRAME-202ENST00000398743 ZNF43P17038 809 aa12.31□□□□□ -0.44
PRAME-202ENST00000398743 HSD11B1P28845 292 aa12.31□□□□□ -0.44
PRAME-202ENST00000398743 BDKRB2P30411 391 aa12.31□□□□□ -0.44
PRAME-202ENST00000398743 ZNF81P51508 661 aa12.31□□□□□ -0.44
PRAME-202ENST00000398743 TAS2R19P59542 299 aa12.31□□□□□ -0.44
PRAME-202ENST00000398743 TRA2AQ13595 282 aaKnown RBP eCLIP12.31□□□□□ -0.446e-14■□□□□ 8.8
PRAME-202ENST00000398743 TMEM176BQ3YBM2 270 aaPredicted RBP12.31□□□□□ -0.44
PRAME-202ENST00000398743 PEAR1Q5VY43 1037 aaPredicted RBP12.31□□□□□ -0.44
PRAME-202ENST00000398743 STEAP1BQ6NZ63 245 aa12.31□□□□□ -0.44
PRAME-202ENST00000398743 CFAP77Q6ZQR2 320 aa12.31□□□□□ -0.44
PRAME-202ENST00000398743 LYPD6Q86Y78 171 aa12.31□□□□□ -0.44
PRAME-202ENST00000398743 OR51S1Q8NGJ8 323 aa12.31□□□□□ -0.44
PRAME-202ENST00000398743 OR2AJ1Q8NGZ0 328 aa12.31□□□□□ -0.44
PRAME-202ENST00000398743 OR8S1Q8NH09 359 aa12.31□□□□□ -0.44
PRAME-202ENST00000398743 RADILQ96JH8 1075 aa12.31□□□□□ -0.44
PRAME-202ENST00000398743 CHIAQ9BZP6 476 aa12.31□□□□□ -0.44
PRAME-202ENST00000398743 MOB1AQ9H8S9 216 aa12.31□□□□□ -0.44
PRAME-202ENST00000398743 SCPEP1Q9HB40 452 aa12.31□□□□□ -0.44
PRAME-202ENST00000398743 ELF5Q9UKW6 265 aaPredicted RBP12.31□□□□□ -0.44
PRAME-202ENST00000398743 PTRH2Q9Y3E5 179 aaKnown RBP12.31□□□□□ -0.44
PRAME-202ENST00000398743 LHFPL6Q9Y693 200 aa12.31□□□□□ -0.44
PRAME-202ENST00000398743 TNRC6BQ9UPQ9 1833 aaKnown RBP12.31□□□□□ -0.44
PRAME-202ENST00000398743 CACNA1CQ13936 2221 aa12.3□□□□□ -0.44
PRAME-202ENST00000398743 ASCC3Q8N3C0 2202 aaKnown RBP12.3□□□□□ -0.44
PRAME-202ENST00000398743 UBE2QL1A1L167 161 aa12.3□□□□□ -0.44
PRAME-202ENST00000398743 ZNF814B7Z6K7 855 aa12.3□□□□□ -0.44
PRAME-202ENST00000398743 C9J4A7 227 aa12.3□□□□□ -0.44
PRAME-202ENST00000398743 NTN3O00634 580 aaPredicted RBP12.3□□□□□ -0.44
PRAME-202ENST00000398743 PDGFBP01127 241 aaPredicted RBP12.3□□□□□ -0.44
PRAME-202ENST00000398743 UMODP07911 640 aa12.3□□□□□ -0.44
PRAME-202ENST00000398743 GIPP09681 153 aaPredicted RBP12.3□□□□□ -0.44
PRAME-202ENST00000398743 GNALP38405 381 aa12.3□□□□□ -0.44
PRAME-202ENST00000398743 DUSP3P51452 185 aaPredicted RBP12.3□□□□□ -0.44
PRAME-202ENST00000398743 PSMA6P60900 246 aaKnown RBP12.3□□□□□ -0.44
PRAME-202ENST00000398743 EXT1Q16394 746 aa12.3□□□□□ -0.44
PRAME-202ENST00000398743 ZNF239Q16600 458 aaKnown RBP12.3□□□□□ -0.44
PRAME-202ENST00000398743 CARD17Q5XLA6 110 aa12.3□□□□□ -0.44
PRAME-202ENST00000398743 OPN5Q6U736 354 aa12.3□□□□□ -0.44
PRAME-202ENST00000398743 FAM198BQ6UWH4 519 aa12.3□□□□□ -0.44
PRAME-202ENST00000398743 ZNF813Q6ZN06 617 aa12.3□□□□□ -0.44
PRAME-202ENST00000398743 OR4D6Q8NGJ1 314 aa12.3□□□□□ -0.44
PRAME-202ENST00000398743 SEH1LQ96EE3 360 aa12.3□□□□□ -0.44
PRAME-202ENST00000398743 ZNF700Q9H0M5 742 aa12.3□□□□□ -0.44
PRAME-202ENST00000398743 CA10Q9NS85 328 aa12.3□□□□□ -0.44
PRAME-202ENST00000398743 COLQQ9Y215 455 aaPredicted RBP12.3□□□□□ -0.44
PRAME-202ENST00000398743 A0A087WZY1 265 aa12.3□□□□□ -0.44
PRAME-202ENST00000398743 C19orf67A6NJJ6 358 aa12.3□□□□□ -0.44
PRAME-202ENST00000398743 AQP7P3A6NL99 342 aa12.3□□□□□ -0.44
PRAME-202ENST00000398743 PATE3B3GLJ2 98 aa12.3□□□□□ -0.44
PRAME-202ENST00000398743 SULT2B1O00204 365 aa12.3□□□□□ -0.44
PRAME-202ENST00000398743 TNFRSF10AO00220 468 aa12.3□□□□□ -0.44
PRAME-202ENST00000398743 RLN1P04808 185 aa12.3□□□□□ -0.44
PRAME-202ENST00000398743 FCER2P06734 321 aa12.3□□□□□ -0.44
PRAME-202ENST00000398743 COX6A1P12074 109 aa12.3□□□□□ -0.44
PRAME-202ENST00000398743 SLC35A1P78382 337 aa12.3□□□□□ -0.44
PRAME-202ENST00000398743 PMPCAQ10713 525 aa12.3□□□□□ -0.44
PRAME-202ENST00000398743 OR10K2Q6IF99 312 aa12.3□□□□□ -0.44
PRAME-202ENST00000398743 RHOUQ7L0Q8 258 aa12.3□□□□□ -0.44
PRAME-202ENST00000398743 GABRG1Q8N1C3 465 aa12.3□□□□□ -0.44
PRAME-202ENST00000398743 FTMTQ8N4E7 242 aa12.3□□□□□ -0.44
PRAME-202ENST00000398743 OR52B4Q8NGK2 314 aa12.3□□□□□ -0.44
PRAME-202ENST00000398743 DVL3Q92997 716 aaPredicted RBP12.3□□□□□ -0.44
PRAME-202ENST00000398743 CLEC4MQ9H2X3 399 aaPredicted RBP12.3□□□□□ -0.44
PRAME-202ENST00000398743 SLCO5A1Q9H2Y9 848 aa12.3□□□□□ -0.44
PRAME-202ENST00000398743 HEXA-AS1Q9H8Q6 139 aa12.3□□□□□ -0.44
PRAME-202ENST00000398743 PRDM6Q9NQX0 595 aa12.3□□□□□ -0.44
PRAME-202ENST00000398743 MYEF2Q9P2K5 600 aaKnown RBP12.3□□□□□ -0.44
PRAME-202ENST00000398743 RHBDD3Q9Y3P4 386 aa12.3□□□□□ -0.44
PRAME-202ENST00000398743 ZNF726A6NNF4 738 aa12.29□□□□□ -0.44
PRAME-202ENST00000398743 LAMTOR5O43504 91 aa12.29□□□□□ -0.44
PRAME-202ENST00000398743 CER1O95813 267 aa12.29□□□□□ -0.44
PRAME-202ENST00000398743 VSIG10L2P0DP72 767 aa12.29□□□□□ -0.44
PRAME-202ENST00000398743 CCL4P13236 92 aa12.29□□□□□ -0.44
PRAME-202ENST00000398743 RAB6AP20340 208 aa12.29□□□□□ -0.44
PRAME-202ENST00000398743 SSTR2P30874 369 aa12.29□□□□□ -0.44
PRAME-202ENST00000398743 CDAP32320 146 aa12.29□□□□□ -0.44
PRAME-202ENST00000398743 CLDN6P56747 220 aa12.29□□□□□ -0.44
PRAME-202ENST00000398743 TSPAN5P62079 268 aa12.29□□□□□ -0.44
PRAME-202ENST00000398743 GABREP78334 506 aa12.29□□□□□ -0.44
PRAME-202ENST00000398743 MFAP5Q13361 173 aa12.29□□□□□ -0.44
PRAME-202ENST00000398743 CSRP2Q16527 193 aa12.29□□□□□ -0.44
PRAME-202ENST00000398743 TMEM81Q6P7N7 255 aa12.29□□□□□ -0.44
PRAME-202ENST00000398743 SLC25A47Q6Q0C1 308 aa12.29□□□□□ -0.44
PRAME-202ENST00000398743 SLC36A1Q7Z2H8 476 aa12.29□□□□□ -0.44
PRAME-202ENST00000398743 TMEM229BQ8NBD8 167 aa12.29□□□□□ -0.44
PRAME-202ENST00000398743 ZNF680Q8NEM1 530 aa12.29□□□□□ -0.44
PRAME-202ENST00000398743 ADAT3Q96EY9 351 aaPredicted RBP12.29□□□□□ -0.44
PRAME-202ENST00000398743 IMMP1LQ96LU5 166 aa12.29□□□□□ -0.44
PRAME-202ENST00000398743 IRF2BPLQ9H1B7 796 aa12.29□□□□□ -0.44
PRAME-202ENST00000398743 CNTD2Q9H8S5 307 aa12.29□□□□□ -0.44
PRAME-202ENST00000398743 TMEM138Q9NPI0 162 aa12.29□□□□□ -0.44
PRAME-202ENST00000398743 PIPOXQ9P0Z9 390 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms