RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 DGAT2L6Q6ZPD8 337 aa10.03□□□□□ -0.8
CSGALNACT1-202ENST00000397998 SULF2Q8IWU5 870 aa10.03□□□□□ -0.8
CSGALNACT1-202ENST00000397998 NKAIN3Q8N8D7 197 aa10.03□□□□□ -0.8
CSGALNACT1-202ENST00000397998 HOXB13Q92826 284 aaPredicted RBP10.03□□□□□ -0.8
CSGALNACT1-202ENST00000397998 OR2A7Q96R45 310 aa10.03□□□□□ -0.8
CSGALNACT1-202ENST00000397998 CMSS1Q9BQ75 279 aaKnown RBP10.03□□□□□ -0.8
CSGALNACT1-202ENST00000397998 SEMA6CQ9H3T2 930 aa10.03□□□□□ -0.8
CSGALNACT1-202ENST00000397998 TAF9BQ9HBM6 251 aa10.03□□□□□ -0.8
CSGALNACT1-202ENST00000397998 ZNF275Q9NSD4 429 aaPredicted RBP10.03□□□□□ -0.8
CSGALNACT1-202ENST00000397998 PLEKHJ1Q9NW61 149 aa10.03□□□□□ -0.8
CSGALNACT1-202ENST00000397998 RNF215Q9Y6U7 377 aa10.03□□□□□ -0.8
CSGALNACT1-202ENST00000397998 CABIN1Q9Y6J0 2220 aa10.03□□□□□ -0.8
CSGALNACT1-202ENST00000397998 ICAM2P13598 275 aa10.03□□□□□ -0.8
CSGALNACT1-202ENST00000397998 HERV-K104P61576 105 aa10.03□□□□□ -0.8
CSGALNACT1-202ENST00000397998 SEH1LQ96EE3 360 aa10.03□□□□□ -0.8
CSGALNACT1-202ENST00000397998 MRPS24Q96EL2 167 aaKnown RBP10.03□□□□□ -0.8
CSGALNACT1-202ENST00000397998 RASL12Q9NYN1 266 aa10.03□□□□□ -0.8
CSGALNACT1-202ENST00000397998 LRP12Q9Y561 859 aa10.03□□□□□ -0.8
CSGALNACT1-202ENST00000397998 PIAS3Q9Y6X2 628 aa10.03□□□□□ -0.8
CSGALNACT1-202ENST00000397998 LINC01553A4QN01 128 aa10.03□□□□□ -0.8
CSGALNACT1-202ENST00000397998 IGKV1D-16P01601 117 aa10.03□□□□□ -0.8
CSGALNACT1-202ENST00000397998 BLVRBP30043 206 aaPredicted RBP10.03□□□□□ -0.8
CSGALNACT1-202ENST00000397998 RAB13P51153 203 aa10.03□□□□□ -0.8
CSGALNACT1-202ENST00000397998 CAV2P51636 162 aa10.03□□□□□ -0.8
CSGALNACT1-202ENST00000397998 RPS11P62280 158 aaKnown RBP eCLIP10.03□□□□□ -0.8
CSGALNACT1-202ENST00000397998 CD226Q15762 336 aa10.03□□□□□ -0.8
CSGALNACT1-202ENST00000397998 TMEM196Q5HYL7 178 aa10.03□□□□□ -0.8
CSGALNACT1-202ENST00000397998 ZNF565Q8N9K5 539 aa10.03□□□□□ -0.8
CSGALNACT1-202ENST00000397998 RLN3Q8WXF3 142 aa10.03□□□□□ -0.8
CSGALNACT1-202ENST00000397998 NUDT9Q9BW91 350 aa10.03□□□□□ -0.8
CSGALNACT1-202ENST00000397998 SHARPINQ9H0F6 387 aa10.03□□□□□ -0.8
CSGALNACT1-202ENST00000397998 C1orf198Q9H425 327 aa10.03□□□□□ -0.8
CSGALNACT1-202ENST00000397998 FAM60AQ9NP50 221 aa10.03□□□□□ -0.8
CSGALNACT1-202ENST00000397998 PARPBPQ9NWS1 579 aa10.03□□□□□ -0.8
CSGALNACT1-202ENST00000397998 MED29Q9NX70 200 aa10.03□□□□□ -0.8
CSGALNACT1-202ENST00000397998 PPP4R1LQ9P1A2 415 aa10.03□□□□□ -0.8
CSGALNACT1-202ENST00000397998 HIF3AQ9Y2N7 669 aa10.03□□□□□ -0.8
CSGALNACT1-202ENST00000397998 WIF1Q9Y5W5 379 aa10.03□□□□□ -0.8
CSGALNACT1-202ENST00000397998 PUS1Q9Y606 427 aaKnown RBP eCLIP10.03□□□□□ -0.8
CSGALNACT1-202ENST00000397998 RTTNQ86VV8 2226 aa10.03□□□□□ -0.8
CSGALNACT1-202ENST00000397998 DNAH12Q6ZR08 3092 aa10.02□□□□□ -0.8
CSGALNACT1-202ENST00000397998 MPZL1O95297 269 aa10.02□□□□□ -0.8
CSGALNACT1-202ENST00000397998 GLAP06280 429 aa10.02□□□□□ -0.8
CSGALNACT1-202ENST00000397998 GLP1RP43220 463 aa10.02□□□□□ -0.8
CSGALNACT1-202ENST00000397998 RPS10P46783 165 aaKnown RBP10.02□□□□□ -0.8
CSGALNACT1-202ENST00000397998 PPIAP62937 165 aaKnown RBP10.02□□□□□ -0.8
CSGALNACT1-202ENST00000397998 GNMTQ14749 295 aa10.02□□□□□ -0.8
CSGALNACT1-202ENST00000397998 RHEBQ15382 184 aa10.02□□□□□ -0.8
CSGALNACT1-202ENST00000397998 C14orf28Q4W4Y0 310 aa10.02□□□□□ -0.8
CSGALNACT1-202ENST00000397998 EEF1A1P5Q5VTE0 462 aa10.02□□□□□ -0.8
CSGALNACT1-202ENST00000397998 NKAIN2Q5VXU1 208 aa10.02□□□□□ -0.8
CSGALNACT1-202ENST00000397998 FAM57BQ71RH2 274 aa10.02□□□□□ -0.8
CSGALNACT1-202ENST00000397998 OR52N5Q8NH56 324 aa10.02□□□□□ -0.8
CSGALNACT1-202ENST00000397998 GPR119Q8TDV5 335 aa10.02□□□□□ -0.8
CSGALNACT1-202ENST00000397998 TSLPQ969D9 159 aa10.02□□□□□ -0.8
CSGALNACT1-202ENST00000397998 SLAMF9Q96A28 289 aa10.02□□□□□ -0.8
CSGALNACT1-202ENST00000397998 ANKRD9Q96BM1 317 aaPredicted RBP10.02□□□□□ -0.8
CSGALNACT1-202ENST00000397998 SLC46A1Q96NT5 459 aa10.02□□□□□ -0.8
CSGALNACT1-202ENST00000397998 TCEAL2Q9H3H9 227 aaPredicted RBP10.02□□□□□ -0.8
CSGALNACT1-202ENST00000397998 TMEM74BQ9NUR3 256 aa10.02□□□□□ -0.8
CSGALNACT1-202ENST00000397998 A8MVM7 634 aa10.02□□□□□ -0.81
CSGALNACT1-202ENST00000397998 TRIM77I1YAP6 450 aa10.02□□□□□ -0.81
CSGALNACT1-202ENST00000397998 CYR61O00622 381 aa10.02□□□□□ -0.81
CSGALNACT1-202ENST00000397998 FGF2P09038 288 aa10.02□□□□□ -0.81
CSGALNACT1-202ENST00000397998 RD3LP0DJH9 198 aa10.02□□□□□ -0.81
CSGALNACT1-202ENST00000397998 DHPSP49366 369 aaPredicted RBP10.02□□□□□ -0.81
CSGALNACT1-202ENST00000397998 POLR2HP52434 150 aaKnown RBP10.02□□□□□ -0.81
CSGALNACT1-202ENST00000397998 BIDP55957 195 aa10.02□□□□□ -0.81
CSGALNACT1-202ENST00000397998 GUCA2BQ16661 112 aa10.02□□□□□ -0.81
CSGALNACT1-202ENST00000397998 MESTQ5EB52 335 aa10.02□□□□□ -0.81
CSGALNACT1-202ENST00000397998 UEVLDQ8IX04 471 aa10.02□□□□□ -0.81
CSGALNACT1-202ENST00000397998 HSD17B11Q8NBQ5 300 aa10.02□□□□□ -0.81
CSGALNACT1-202ENST00000397998 ZNF707Q96C28 371 aaPredicted RBP10.02□□□□□ -0.81
CSGALNACT1-202ENST00000397998 ZDHHC12Q96GR4 267 aa10.02□□□□□ -0.81
CSGALNACT1-202ENST00000397998 PBDC1Q9BVG4 233 aa10.02□□□□□ -0.81
CSGALNACT1-202ENST00000397998 TPSD1Q9BZJ3 242 aa10.02□□□□□ -0.81
CSGALNACT1-202ENST00000397998 RHOFQ9HBH0 211 aa10.02□□□□□ -0.81
CSGALNACT1-202ENST00000397998 OR2M5A3KFT3 312 aa10.02□□□□□ -0.81
CSGALNACT1-202ENST00000397998 J3QRE1 110 aa10.02□□□□□ -0.81
CSGALNACT1-202ENST00000397998 PLRG1O43660 514 aaKnown RBP10.02□□□□□ -0.81
CSGALNACT1-202ENST00000397998 NSA2O95478 260 aaKnown RBP10.02□□□□□ -0.81
CSGALNACT1-202ENST00000397998 CD1CP29017 333 aa10.02□□□□□ -0.81
CSGALNACT1-202ENST00000397998 SSBP1Q04837 148 aaKnown RBP10.02□□□□□ -0.81
CSGALNACT1-202ENST00000397998 EXOSC6Q5RKV6 272 aaKnown RBP10.02□□□□□ -0.81
CSGALNACT1-202ENST00000397998 PARM1Q6UWI2 310 aa10.02□□□□□ -0.81
CSGALNACT1-202ENST00000397998 UNQ9370/PRO34162Q6UXP9 181 aa10.02□□□□□ -0.81
CSGALNACT1-202ENST00000397998 SPRED2Q7Z698 418 aa10.02□□□□□ -0.81
CSGALNACT1-202ENST00000397998 GKN2Q86XP6 184 aa10.02□□□□□ -0.81
CSGALNACT1-202ENST00000397998 SFTPA2Q8IWL1 248 aa10.02□□□□□ -0.81
CSGALNACT1-202ENST00000397998 FAM160A2Q8N612 972 aaPredicted RBP10.02□□□□□ -0.81
CSGALNACT1-202ENST00000397998 KCNG3Q8TAE7 436 aa10.02□□□□□ -0.81
CSGALNACT1-202ENST00000397998 OR51E1Q8TCB6 317 aa10.02□□□□□ -0.81
CSGALNACT1-202ENST00000397998 MENTQ9BUN1 341 aa10.02□□□□□ -0.81
CSGALNACT1-202ENST00000397998 PRR13Q9NZ81 148 aa10.02□□□□□ -0.81
CSGALNACT1-202ENST00000397998 C9orf170A2RU37 121 aa10.01□□□□□ -0.81
CSGALNACT1-202ENST00000397998 GP1BAP07359 652 aa10.01□□□□□ -0.81
CSGALNACT1-202ENST00000397998 ZNF43P17038 809 aa10.01□□□□□ -0.81
CSGALNACT1-202ENST00000397998 HSD17B7P56937 341 aa10.01□□□□□ -0.81
CSGALNACT1-202ENST00000397998 OR2B8PP59922 312 aa10.01□□□□□ -0.81
CSGALNACT1-202ENST00000397998 FAM69BQ5VUD6 431 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms