RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 FAM74A7A6NL05 159 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 RFPL4AA6NLU0 287 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 A8MXK9 166 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 RFPL4AL1F8VTS6 287 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 TGOLN2O43493 480 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 EIF4E2O60573 245 aaKnown RBP4.94□□□□□ -1.62
PTPRD-205ENST00000397611 CD3DP04234 171 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 CRYBA1P05813 215 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 RPA2P15927 270 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 ALOX5APP20292 161 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 P2RX1P51575 399 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 PDX1P52945 283 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 CLRN1P58418 232 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 UBXN2BQ14CS0 331 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 IAH1Q2TAA2 248 aaPredicted RBP4.94□□□□□ -1.62
PTPRD-205ENST00000397611 FAM74A3Q4VXF1 159 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 NHLRC3Q5JS37 347 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 UQCC3Q6UW78 93 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 SULF2Q8IWU5 870 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 TMEM106AQ96A25 262 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 CCDC74AQ96AQ1 378 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 PTCHD1Q96NR3 888 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 APOOQ9BUR5 198 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 UCK1Q9HA47 277 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 TRPM6Q9BX84 2022 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 A0A1W2PPH5 198 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 SLC31A1O15431 190 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 PNPP00491 289 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 NMBP08949 121 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 RFC3P40938 356 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 TNFRSF4P43489 277 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 LSM11P83369 360 aaKnown RBP eCLIP4.94□□□□□ -1.62
PTPRD-205ENST00000397611 KCNIP4Q6PIL6 250 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 C7orf61Q8IZ16 206 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 PLPP7Q8NBV4 271 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 C17orf47Q8NEP4 570 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 OR1S1Q8NH92 325 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 VSTM2LQ96N03 204 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 RBP7Q96R05 134 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 ZNF442Q9H7R0 627 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.94□□□□□ -1.62
PTPRD-205ENST00000397611 ZNF230Q9UIE0 474 aaPredicted RBP4.94□□□□□ -1.62
PTPRD-205ENST00000397611 A0A1W2PQU0 124 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 PYCARD-AS1I3L0S3 204 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 XRCC3O43542 346 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 GLSO94925 669 aaPredicted RBP4.94□□□□□ -1.62
PTPRD-205ENST00000397611 MAKP20794 623 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 GABRR1P24046 479 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 TMEM41BQ5BJD5 291 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 OR7E24Q6IFN5 339 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 FIGLAQ6QHK4 219 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 VITQ6UXI7 678 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 ZNF687Q8N1G0 1237 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 SLC25A38Q96DW6 304 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 NIPSNAP3BQ9BS92 247 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 WASF3Q9UPY6 502 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 GPR55Q9Y2T6 319 aaPredicted RBP4.94□□□□□ -1.62
PTPRD-205ENST00000397611 OR5H14A6NHG9 310 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 RNASEK-C17orf49H0YIS7 233 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 HCRTR2O43614 444 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 PLRG1O43660 514 aaKnown RBP4.94□□□□□ -1.62
PTPRD-205ENST00000397611 NTSR1P30989 418 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 MNX1P50219 401 aaPredicted RBP4.94□□□□□ -1.62
PTPRD-205ENST00000397611 AGFG1P52594 562 aaKnown RBP4.94□□□□□ -1.62
PTPRD-205ENST00000397611 RPL23AP62750 156 aaKnown RBP4.94□□□□□ -1.62
PTPRD-205ENST00000397611 MGAT2Q10469 447 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 C1orf100Q5SVJ3 147 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 FBXO46Q6PJ61 603 aaPredicted RBP4.94□□□□□ -1.62
PTPRD-205ENST00000397611 NECAP1Q8NC96 275 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 PFN4Q8NHR9 129 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 MCHR2Q969V1 340 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 FAM3DQ96BQ1 224 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 C4orf45Q96LM5 186 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 FKRPQ9H9S5 495 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 ELOVL3Q9HB03 270 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 CACNA1IQ9P0X4 2223 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 hCG_1809904A0A1W2PP81 198 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 A0A1W2PR64 198 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 A0A1W2PRV1 198 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 FITM1A5D6W6 292 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 TLX3O43711 291 aaPredicted RBP4.94□□□□□ -1.62
PTPRD-205ENST00000397611 NXPH3O95157 252 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 ZFPL1O95159 310 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 NSA2O95478 260 aaKnown RBP4.94□□□□□ -1.62
PTPRD-205ENST00000397611 FOLR1P15328 257 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 MRPS34P82930 218 aaKnown RBP4.94□□□□□ -1.62
PTPRD-205ENST00000397611 NAAAQ02083 359 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 EEF1A1P5Q5VTE0 462 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 MDGA2Q7Z553 956 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 CPEB2Q7Z5Q1 589 aaKnown RBP4.94□□□□□ -1.62
PTPRD-205ENST00000397611 PGAM5Q96HS1 289 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 FAM71F1Q96KD3 344 aaPredicted RBP4.94□□□□□ -1.62
PTPRD-205ENST00000397611 TGM7Q96PF1 710 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 HIST1H2AAQ96QV6 131 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 PCED1AQ9H1Q7 454 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 DNAJB12Q9NXW2 375 aaKnown RBP4.94□□□□□ -1.62
PTPRD-205ENST00000397611 SLC2A8Q9NY64 477 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 COPS7AQ9UBW8 275 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 OR1A2Q9Y585 309 aa4.94□□□□□ -1.62
PTPRD-205ENST00000397611 KCNE3Q9Y6H6 103 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms