RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 GABRA6Q16445 453 aa18.51■□□□□ 0.55
CPNE1-204ENST00000397443 HIST2H3PS2Q5TEC6 136 aa18.51■□□□□ 0.55
CPNE1-204ENST00000397443 HIST2H3AQ71DI3 136 aa18.51■□□□□ 0.55
CPNE1-204ENST00000397443 P2RY8Q86VZ1 359 aa18.51■□□□□ 0.55
CPNE1-204ENST00000397443 PDCD1LG2Q9BQ51 273 aa18.51■□□□□ 0.55
CPNE1-204ENST00000397443 OR51E2Q9H255 320 aa18.51■□□□□ 0.55
CPNE1-204ENST00000397443 LOC100506127A0A0U1RQW1 187 aa18.5■□□□□ 0.55
CPNE1-204ENST00000397443 HTR5AP47898 357 aa18.5■□□□□ 0.55
CPNE1-204ENST00000397443 UBE2NP61088 152 aaKnown RBP18.5■□□□□ 0.55
CPNE1-204ENST00000397443 RAB1AP62820 205 aa18.5■□□□□ 0.55
CPNE1-204ENST00000397443 BDH1Q02338 343 aa18.5■□□□□ 0.55
CPNE1-204ENST00000397443 CDK5R1Q15078 307 aa18.5■□□□□ 0.55
CPNE1-204ENST00000397443 RELL2Q8NC24 303 aaPredicted RBP18.5■□□□□ 0.55
CPNE1-204ENST00000397443 NDUFB11Q9NX14 153 aa18.5■□□□□ 0.55
CPNE1-204ENST00000397443 FRRS1LQ9P0K9 344 aa18.5■□□□□ 0.55
CPNE1-204ENST00000397443 SMIM31A0A1B0GVY4 71 aa18.49■□□□□ 0.55
CPNE1-204ENST00000397443 TMEM269A0A1B0GVZ9 245 aa18.49■□□□□ 0.55
CPNE1-204ENST00000397443 MSTNO14793 375 aa18.49■□□□□ 0.55
CPNE1-204ENST00000397443 ZNF254O75437 659 aa18.49■□□□□ 0.55
CPNE1-204ENST00000397443 GNLYP22749 145 aa18.49■□□□□ 0.55
CPNE1-204ENST00000397443 SLC6A9P48067 706 aa18.49■□□□□ 0.55
CPNE1-204ENST00000397443 GDI2P50395 445 aaKnown RBP18.49■□□□□ 0.55
CPNE1-204ENST00000397443 INSL4Q14641 139 aa18.49■□□□□ 0.55
CPNE1-204ENST00000397443 P2RY6Q15077 328 aa18.49■□□□□ 0.55
CPNE1-204ENST00000397443 RAB35Q15286 201 aa18.49■□□□□ 0.55
CPNE1-204ENST00000397443 SOWAHCQ53LP3 525 aaPredicted RBP18.49■□□□□ 0.55
CPNE1-204ENST00000397443 SFRP5Q5T4F7 317 aa18.49■□□□□ 0.55
CPNE1-204ENST00000397443 ALKBH2Q6NS38 261 aa18.49■□□□□ 0.55
CPNE1-204ENST00000397443 RPL22L1Q6P5R6 122 aaKnown RBP18.49■□□□□ 0.55
CPNE1-204ENST00000397443 DEGS2Q6QHC5 323 aa18.49■□□□□ 0.55
CPNE1-204ENST00000397443 BHLHA15Q7RTS1 189 aaPredicted RBP18.49■□□□□ 0.55
CPNE1-204ENST00000397443 PRSS35Q8N3Z0 413 aa18.49■□□□□ 0.55
CPNE1-204ENST00000397443 ZNF283Q8N7M2 679 aa18.49■□□□□ 0.55
CPNE1-204ENST00000397443 OR2G2Q8NGZ5 317 aa18.49■□□□□ 0.55
CPNE1-204ENST00000397443 CHCHD6Q9BRQ6 235 aa18.49■□□□□ 0.55
CPNE1-204ENST00000397443 RBM38Q9H0Z9 239 aaKnown RBP18.49■□□□□ 0.55
CPNE1-204ENST00000397443 EXOSC4Q9NPD3 245 aaKnown RBP18.49■□□□□ 0.55
CPNE1-204ENST00000397443 SLC22A13Q9Y226 551 aa18.49■□□□□ 0.55
CPNE1-204ENST00000397443 HIVEP3Q5T1R4 2406 aa18.49■□□□□ 0.55
CPNE1-204ENST00000397443 A8MXE2 369 aa18.49■□□□□ 0.55
CPNE1-204ENST00000397443 HOXC12P31275 282 aa18.49■□□□□ 0.55
CPNE1-204ENST00000397443 DMKNQ6E0U4 476 aaPredicted RBP18.49■□□□□ 0.55
CPNE1-204ENST00000397443 SYT9Q86SS6 491 aa18.49■□□□□ 0.55
CPNE1-204ENST00000397443 OR13C5Q8NGS8 318 aa18.49■□□□□ 0.55
CPNE1-204ENST00000397443 OR1F12Q8NHA8 337 aa18.49■□□□□ 0.55
CPNE1-204ENST00000397443 GHSRQ92847 366 aa18.49■□□□□ 0.55
CPNE1-204ENST00000397443 ISOC1Q96CN7 298 aa18.49■□□□□ 0.55
CPNE1-204ENST00000397443 C1QTNF6Q9BXI9 259 aa18.49■□□□□ 0.55
CPNE1-204ENST00000397443 HDHD2Q9H0R4 259 aa18.49■□□□□ 0.55
CPNE1-204ENST00000397443 PIGMQ9H3S5 423 aa18.49■□□□□ 0.55
CPNE1-204ENST00000397443 DDX28Q9NUL7 540 aaKnown RBP18.49■□□□□ 0.55
CPNE1-204ENST00000397443 LOC110117498-PIK3R3F6TDL0 507 aa18.48■□□□□ 0.55
CPNE1-204ENST00000397443 SYNGR3O43761 229 aa18.48■□□□□ 0.55
CPNE1-204ENST00000397443 IL32P24001 234 aa18.48■□□□□ 0.55
CPNE1-204ENST00000397443 APEX1P27695 318 aaKnown RBP18.48■□□□□ 0.55
CPNE1-204ENST00000397443 CX3CR1P49238 355 aa18.48■□□□□ 0.55
CPNE1-204ENST00000397443 GRB2P62993 217 aaKnown RBP18.48■□□□□ 0.55
CPNE1-204ENST00000397443 FAM27E3Q08E93 113 aa18.48■□□□□ 0.55
CPNE1-204ENST00000397443 ALKBH1Q13686 389 aaKnown RBP18.48■□□□□ 0.55
CPNE1-204ENST00000397443 GSG1Q2KHT4 349 aa18.48■□□□□ 0.55
CPNE1-204ENST00000397443 CCDC58Q4VC31 144 aa18.48■□□□□ 0.55
CPNE1-204ENST00000397443 WDR38Q5JTN6 314 aa18.48■□□□□ 0.55
CPNE1-204ENST00000397443 STAC2Q6ZMT1 411 aa18.48■□□□□ 0.55
CPNE1-204ENST00000397443 SLC16A12Q6ZSM3 486 aa18.48■□□□□ 0.55
CPNE1-204ENST00000397443 NAA40Q86UY6 237 aa18.48■□□□□ 0.55
CPNE1-204ENST00000397443 MDP1Q86V88 176 aa18.48■□□□□ 0.55
CPNE1-204ENST00000397443 CPEB3Q8NE35 698 aaKnown RBP18.48■□□□□ 0.55
CPNE1-204ENST00000397443 NANOS1Q8WY41 292 aaKnown RBP18.48■□□□□ 0.55
CPNE1-204ENST00000397443 SMIM19Q96E16 107 aa18.48■□□□□ 0.55
CPNE1-204ENST00000397443 HDHD5Q9BXW7 423 aa18.48■□□□□ 0.55
CPNE1-204ENST00000397443 R4GMQ9 66 aa18.48■□□□□ 0.55
CPNE1-204ENST00000397443 OGG1O15527 345 aa18.47■□□□□ 0.55
CPNE1-204ENST00000397443 PLPP2O43688 288 aa18.47■□□□□ 0.55
CPNE1-204ENST00000397443 AIREO43918 545 aa18.47■□□□□ 0.55
CPNE1-204ENST00000397443 UBL3O95164 117 aa18.47■□□□□ 0.55
CPNE1-204ENST00000397443 CCL2P13500 99 aa18.47■□□□□ 0.55
CPNE1-204ENST00000397443 CCNOP22674 350 aa18.47■□□□□ 0.55
CPNE1-204ENST00000397443 KIR3DL2P43630 455 aa18.47■□□□□ 0.55
CPNE1-204ENST00000397443 TGM4P49221 684 aa18.47■□□□□ 0.55
CPNE1-204ENST00000397443 ZNF829Q3KNS6 432 aaPredicted RBP18.47■□□□□ 0.55
CPNE1-204ENST00000397443 TMEM53Q6P2H8 277 aa18.47■□□□□ 0.55
CPNE1-204ENST00000397443 ALDH16A1Q8IZ83 802 aa18.47■□□□□ 0.55
CPNE1-204ENST00000397443 RDH10Q8IZV5 341 aa18.47■□□□□ 0.55
CPNE1-204ENST00000397443 MS4A3Q96HJ5 214 aa18.47■□□□□ 0.55
CPNE1-204ENST00000397443 PGLYRP3Q96LB9 341 aa18.47■□□□□ 0.55
CPNE1-204ENST00000397443 RNF167Q9H6Y7 350 aa18.47■□□□□ 0.55
CPNE1-204ENST00000397443 ENPP5Q9UJA9 477 aa18.47■□□□□ 0.55
CPNE1-204ENST00000397443 NOL3O60936 208 aaKnown RBP18.47■□□□□ 0.55
CPNE1-204ENST00000397443 AGFG2O95081 481 aa18.47■□□□□ 0.55
CPNE1-204ENST00000397443 ZFPL1O95159 310 aa18.47■□□□□ 0.55
CPNE1-204ENST00000397443 ANXA2P07355 339 aaKnown RBP18.47■□□□□ 0.55
CPNE1-204ENST00000397443 ANOS1P23352 680 aa18.47■□□□□ 0.55
CPNE1-204ENST00000397443 PSMA1P25786 263 aaKnown RBP18.47■□□□□ 0.55
CPNE1-204ENST00000397443 TGFBR1P36897 503 aa18.47■□□□□ 0.55
CPNE1-204ENST00000397443 ZNF121P58317 390 aaPredicted RBP18.47■□□□□ 0.55
CPNE1-204ENST00000397443 RSPO1Q2MKA7 263 aaPredicted RBP18.47■□□□□ 0.55
CPNE1-204ENST00000397443 MRGPRGQ86SM5 289 aa18.47■□□□□ 0.55
CPNE1-204ENST00000397443 ANKRD13BQ86YJ7 626 aa18.47■□□□□ 0.55
CPNE1-204ENST00000397443 C4orf45Q96LM5 186 aa18.47■□□□□ 0.55
CPNE1-204ENST00000397443 DCLRE1CQ96SD1 692 aaKnown RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms