RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 PHYHO14832 338 aa8.25□□□□□ -1.09
CAPN3-206ENST00000397163 GMFGO60234 142 aa8.25□□□□□ -1.09
CAPN3-206ENST00000397163 OR6A2O95222 327 aa8.25□□□□□ -1.09
CAPN3-206ENST00000397163 SPARCP09486 303 aa8.25□□□□□ -1.09
CAPN3-206ENST00000397163 PNMTP11086 282 aa8.25□□□□□ -1.09
CAPN3-206ENST00000397163 PGAM2P15259 253 aa8.25□□□□□ -1.09
CAPN3-206ENST00000397163 NME2P22392 152 aa8.25□□□□□ -1.09
CAPN3-206ENST00000397163 RIDAP52758 137 aaKnown RBP8.25□□□□□ -1.09
CAPN3-206ENST00000397163 RAB38P57729 211 aa8.25□□□□□ -1.09
CAPN3-206ENST00000397163 SRSF4Q08170 494 aaKnown RBP8.25□□□□□ -1.09
CAPN3-206ENST00000397163 AIMP2Q13155 320 aaKnown RBP8.25□□□□□ -1.09
CAPN3-206ENST00000397163 RNF212Q495C1 297 aa8.25□□□□□ -1.09
CAPN3-206ENST00000397163 WBP2NLQ6ICG8 309 aa8.25□□□□□ -1.09
CAPN3-206ENST00000397163 STX12Q86Y82 276 aa8.25□□□□□ -1.09
CAPN3-206ENST00000397163 OTOSQ8NHW6 89 aa8.25□□□□□ -1.09
CAPN3-206ENST00000397163 HOXB13Q92826 284 aaPredicted RBP8.25□□□□□ -1.09
CAPN3-206ENST00000397163 FOXRED1Q96CU9 486 aaPredicted RBP8.25□□□□□ -1.09
CAPN3-206ENST00000397163 PARP12Q9H0J9 701 aaKnown RBP8.25□□□□□ -1.09
CAPN3-206ENST00000397163 ACKR4Q9NPB9 350 aa8.25□□□□□ -1.09
CAPN3-206ENST00000397163 UFSP2Q9NUQ7 469 aa8.25□□□□□ -1.09
CAPN3-206ENST00000397163 KLK13Q9UKR3 277 aa8.25□□□□□ -1.09
CAPN3-206ENST00000397163 CARHSP1Q9Y2V2 147 aaKnown RBP8.25□□□□□ -1.09
CAPN3-206ENST00000397163 C9JQL5 133 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 DOK2O60496 412 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 ARG1P05089 322 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 TPT1P13693 172 aaKnown RBP8.24□□□□□ -1.09
CAPN3-206ENST00000397163 ZBTB25P24278 435 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 LSSP48449 732 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 RAB2AP61019 212 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 SPOCK1Q08629 439 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 SLC17A1Q14916 467 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 MOGAT2Q3SYC2 334 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 C2orf27AQ580R0 203 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 PYY3Q5JQD4 70 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 EEF1A1P5Q5VTE0 462 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 POMZP3Q6PJE2 187 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 PGAP1Q75T13 922 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 RTL10Q7L3V2 364 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 BCORP1Q8N888 145 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 ACBD4Q8NC06 268 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 CCDC54Q8NEL0 328 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 OR5AP2Q8NGF4 316 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 DCUN1D4Q92564 292 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 SLC25A44Q96H78 314 aaPredicted RBP8.24□□□□□ -1.09
CAPN3-206ENST00000397163 OR8B4Q96RC9 309 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 ZNF587Q96SQ5 575 aaPredicted RBP8.24□□□□□ -1.09
CAPN3-206ENST00000397163 PRRT1Q99946 306 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 NRIP2Q9BQI9 281 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 EDEM2Q9BV94 578 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 C5orf42Q9H799 3197 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 C9orf170A2RU37 121 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 C11orf98E9PRG8 122 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 XKRYO14609 159 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 PNPP00491 289 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 AKR1C4P17516 323 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 CD80P33681 288 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 GJA4P35212 333 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 EIF2S3P41091 472 aaKnown RBP8.24□□□□□ -1.09
CAPN3-206ENST00000397163 DNASE1L1P49184 302 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 MEF2DQ14814 521 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 TOMM20Q15388 145 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 DEFB110Q30KQ9 67 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 NKAPLQ5M9Q1 402 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 ASPHD2Q6ICH7 369 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 FAM166AQ6J272 317 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 TMEM184AQ6ZMB5 413 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 TMPPEQ6ZT21 453 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 TTLL10Q6ZVT0 673 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 TAF8Q7Z7C8 310 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 ADGRE4PQ86SQ3 457 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 SLC25A42Q86VD7 318 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 CHST4Q8NCG5 386 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 OR4K17Q8NGC6 315 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 TCTEX1D2Q8WW35 142 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 KTI12Q96EK9 354 aaPredicted RBP8.24□□□□□ -1.09
CAPN3-206ENST00000397163 TMEM41AQ96HV5 264 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 AKR1E2Q96JD6 320 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 NECAB3Q96P71 396 aaPredicted RBP8.24□□□□□ -1.09
CAPN3-206ENST00000397163 TMED7Q9Y3B3 224 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 CSAG2Q9Y5P2 127 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 MRPS18BQ9Y676 258 aaKnown RBP8.24□□□□□ -1.09
CAPN3-206ENST00000397163 TICRRQ7Z2Z1 1910 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 APBB3O95704 486 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 TXNDC12O95881 172 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 CD74P04233 296 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 ASAH2BP0C7U1 165 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 CT45A8P0DMV1 189 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 CT45A9P0DMV2 189 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 CFPP27918 469 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 RGS19P49795 217 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 SEC13P55735 322 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 SQSTM1Q13501 440 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 ERV3-1Q14264 604 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 SSX2Q16385 188 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 CT45A2Q5DJT8 189 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 EMC4Q5J8M3 183 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 ZNF776Q68DI1 518 aaPredicted RBP8.24□□□□□ -1.09
CAPN3-206ENST00000397163 ZNF813Q6ZN06 617 aa8.24□□□□□ -1.09
CAPN3-206ENST00000397163 ATG4DQ86TL0 474 aaPredicted RBP8.24□□□□□ -1.09
CAPN3-206ENST00000397163 SKA3Q8IX90 412 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms