RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 WACQ9BTA9 647 aa12.55□□□□□ -0.4
SEC13-208ENST00000397109 DYNLRB1Q9NP97 96 aa12.55□□□□□ -0.4
SEC13-208ENST00000397109 MYOZ1Q9NP98 299 aaPredicted RBP12.55□□□□□ -0.4
SEC13-208ENST00000397109 NRIP3Q9NQ35 241 aa12.55□□□□□ -0.4
SEC13-208ENST00000397109 ADAM18Q9Y3Q7 739 aa12.55□□□□□ -0.4
SEC13-208ENST00000397109 ZANQ9Y493 2812 aa12.55□□□□□ -0.4
SEC13-208ENST00000397109 PRSS37A4D1T9 235 aa12.54□□□□□ -0.4
SEC13-208ENST00000397109 CDK1P06493 297 aa12.54□□□□□ -0.4
SEC13-208ENST00000397109 CST2P09228 141 aa12.54□□□□□ -0.4
SEC13-208ENST00000397109 PCSK6P29122 969 aa12.54□□□□□ -0.4
SEC13-208ENST00000397109 SLC6A6P31641 620 aa12.54□□□□□ -0.4
SEC13-208ENST00000397109 PDLIM4P50479 330 aa12.54□□□□□ -0.4
SEC13-208ENST00000397109 EFNB1P98172 346 aa12.54□□□□□ -0.4
SEC13-208ENST00000397109 NEDD8Q15843 81 aa12.54□□□□□ -0.4
SEC13-208ENST00000397109 RNLSQ5VYX0 342 aa12.54□□□□□ -0.4
SEC13-208ENST00000397109 SLC27A4Q6P1M0 643 aa12.54□□□□□ -0.4
SEC13-208ENST00000397109 Q71RC1 249 aaPredicted RBP12.54□□□□□ -0.4
SEC13-208ENST00000397109 ADCK1Q86TW2 530 aa12.54□□□□□ -0.4
SEC13-208ENST00000397109 CLVS1Q8IUQ0 354 aaPredicted RBP12.54□□□□□ -0.4
SEC13-208ENST00000397109 ZNF525Q8N782 197 aa12.54□□□□□ -0.4
SEC13-208ENST00000397109 TEX47Q8TBZ9 253 aa12.54□□□□□ -0.4
SEC13-208ENST00000397109 NEU4Q8WWR8 484 aaPredicted RBP12.54□□□□□ -0.4
SEC13-208ENST00000397109 COPS4Q9BT78 406 aa12.54□□□□□ -0.4
SEC13-208ENST00000397109 PLA2G12AQ9BZM1 189 aa12.54□□□□□ -0.4
SEC13-208ENST00000397109 CCDC90BQ9GZT6 254 aa12.54□□□□□ -0.4
SEC13-208ENST00000397109 PAK1IP1Q9NWT1 392 aaPredicted RBP12.54□□□□□ -0.4
SEC13-208ENST00000397109 RPL36Q9Y3U8 105 aaKnown RBP12.54□□□□□ -0.4
SEC13-208ENST00000397109 IGHV4-30-2A0A087WSY4 118 aa12.53□□□□□ -0.4
SEC13-208ENST00000397109 A0A1W2PPL8 197 aa12.53□□□□□ -0.4
SEC13-208ENST00000397109 IRGMA1A4Y4 181 aa12.53□□□□□ -0.4
SEC13-208ENST00000397109 C12orf71A8MTZ7 269 aa12.53□□□□□ -0.4
SEC13-208ENST00000397109 NDUFS8O00217 210 aa12.53□□□□□ -0.4
SEC13-208ENST00000397109 ARPC3O15145 178 aa12.53□□□□□ -0.4
SEC13-208ENST00000397109 SYNGR3O43761 229 aa12.53□□□□□ -0.4
SEC13-208ENST00000397109 GPRIN2O60269 458 aa12.53□□□□□ -0.4
SEC13-208ENST00000397109 TXNDC12O95881 172 aa12.53□□□□□ -0.4
SEC13-208ENST00000397109 ZNF32P17041 273 aa12.53□□□□□ -0.4
SEC13-208ENST00000397109 MSR1P21757 451 aa12.53□□□□□ -0.4
SEC13-208ENST00000397109 POU1F1P28069 291 aa12.53□□□□□ -0.4
SEC13-208ENST00000397109 LAP3P28838 519 aa12.53□□□□□ -0.4
SEC13-208ENST00000397109 RAD52P43351 418 aa12.53□□□□□ -0.4
SEC13-208ENST00000397109 SELENOVP59797 346 aa12.53□□□□□ -0.4
SEC13-208ENST00000397109 KRR1Q13601 381 aaKnown RBP12.53□□□□□ -0.4
SEC13-208ENST00000397109 TBCEQ15813 527 aaPredicted RBP12.53□□□□□ -0.4
SEC13-208ENST00000397109 MESTQ5EB52 335 aa12.53□□□□□ -0.4
SEC13-208ENST00000397109 PABPC1L2AQ5JQF8 200 aa12.53□□□□□ -0.4
SEC13-208ENST00000397109 UBE2UQ5VVX9 321 aa12.53□□□□□ -0.4
SEC13-208ENST00000397109 UNQ6126/PRO20091Q6UXV3 157 aa12.53□□□□□ -0.4
SEC13-208ENST00000397109 SYT9Q86SS6 491 aa12.53□□□□□ -0.4
SEC13-208ENST00000397109 OR52L1Q8NGH7 329 aa12.53□□□□□ -0.4
SEC13-208ENST00000397109 OR8D4Q8NGM9 314 aa12.53□□□□□ -0.4
SEC13-208ENST00000397109 C10orf105Q8TEF2 133 aa12.53□□□□□ -0.4
SEC13-208ENST00000397109 ZFAND2BQ8WV99 257 aa12.53□□□□□ -0.4
SEC13-208ENST00000397109 GGHQ92820 318 aa12.53□□□□□ -0.4
SEC13-208ENST00000397109 UBE2FQ969M7 185 aa12.53□□□□□ -0.4
SEC13-208ENST00000397109 ISOC1Q96CN7 298 aa12.53□□□□□ -0.4
SEC13-208ENST00000397109 SAMD8Q96LT4 415 aa12.53□□□□□ -0.4
SEC13-208ENST00000397109 MRPL37Q9BZE1 423 aaKnown RBP12.53□□□□□ -0.4
SEC13-208ENST00000397109 BCL2L14Q9BZR8 327 aa12.53□□□□□ -0.4
SEC13-208ENST00000397109 RACGAP1Q9H0H5 632 aa12.53□□□□□ -0.4
SEC13-208ENST00000397109 EGLN3Q9H6Z9 239 aa12.53□□□□□ -0.4
SEC13-208ENST00000397109 ERVK-18Q9QC07 812 aa12.53□□□□□ -0.4
SEC13-208ENST00000397109 TIMM10BQ9Y5J6 103 aa12.53□□□□□ -0.4
SEC13-208ENST00000397109 IER3IP1Q9Y5U9 82 aa12.53□□□□□ -0.4
SEC13-208ENST00000397109 NSD1Q96L73 2696 aaPredicted RBP12.53□□□□□ -0.4
SEC13-208ENST00000397109 NF1P21359 2839 aa12.53□□□□□ -0.4
SEC13-208ENST00000397109 TEX13CA0A0J9YWL9 993 aa12.53□□□□□ -0.4
SEC13-208ENST00000397109 BHLHE40O14503 412 aa12.53□□□□□ -0.4
SEC13-208ENST00000397109 IMPA2O14732 288 aa12.53□□□□□ -0.4
SEC13-208ENST00000397109 IDH3BO43837 385 aa12.53□□□□□ -0.4
SEC13-208ENST00000397109 HMGN1P05114 100 aa12.53□□□□□ -0.4
SEC13-208ENST00000397109 STOMP27105 288 aa12.53□□□□□ -0.4
SEC13-208ENST00000397109 APEX1P27695 318 aaKnown RBP12.53□□□□□ -0.4
SEC13-208ENST00000397109 SLC15A1P46059 708 aa12.53□□□□□ -0.4
SEC13-208ENST00000397109 LSAMPQ13449 338 aa12.53□□□□□ -0.4
SEC13-208ENST00000397109 RGS7BPQ6MZT1 257 aaPredicted RBP12.53□□□□□ -0.4
SEC13-208ENST00000397109 ANKRD13BQ86YJ7 626 aa12.53□□□□□ -0.4
SEC13-208ENST00000397109 LNX2Q8N448 690 aa12.53□□□□□ -0.4
SEC13-208ENST00000397109 CDCA4Q9BXL8 241 aa12.53□□□□□ -0.4
SEC13-208ENST00000397109 MS4A5Q9H3V2 200 aa12.53□□□□□ -0.4
SEC13-208ENST00000397109 ACOT13Q9NPJ3 140 aa12.53□□□□□ -0.4
SEC13-208ENST00000397109 POLE4Q9NR33 117 aa12.53□□□□□ -0.4
SEC13-208ENST00000397109 VSX1Q9NZR4 365 aaPredicted RBP12.53□□□□□ -0.4
SEC13-208ENST00000397109 EIF3KQ9UBQ5 218 aaKnown RBP12.53□□□□□ -0.4
SEC13-208ENST00000397109 GPR160Q9UJ42 338 aa12.53□□□□□ -0.4
SEC13-208ENST00000397109 BAIAP2Q9UQB8 552 aa12.53□□□□□ -0.4
SEC13-208ENST00000397109 CR1P17927 2039 aa12.52□□□□□ -0.4
SEC13-208ENST00000397109 LOC390937A0A1W2PQ73 354 aa12.52□□□□□ -0.41
SEC13-208ENST00000397109 H7C1C5 153 aa12.52□□□□□ -0.41
SEC13-208ENST00000397109 M0R233 179 aa12.52□□□□□ -0.41
SEC13-208ENST00000397109 KHDRBS3O75525 346 aaKnown RBP12.52□□□□□ -0.41
SEC13-208ENST00000397109 SOX14O95416 240 aa12.52□□□□□ -0.41
SEC13-208ENST00000397109 CCL2P13500 99 aa12.52□□□□□ -0.41
SEC13-208ENST00000397109 GDI2P50395 445 aaKnown RBP12.52□□□□□ -0.41
SEC13-208ENST00000397109 UCP2P55851 309 aa12.52□□□□□ -0.41
SEC13-208ENST00000397109 LCN6P62502 163 aa12.52□□□□□ -0.41
SEC13-208ENST00000397109 PSG4Q00888 419 aa12.52□□□□□ -0.41
SEC13-208ENST00000397109 LOXL1Q08397 574 aaPredicted RBP12.52□□□□□ -0.41
SEC13-208ENST00000397109 GINS1Q14691 196 aa12.52□□□□□ -0.41
SEC13-208ENST00000397109 SMN1Q16637 294 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms