RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 COL8A2P25067 703 aa11.88□□□□□ -0.51
SEC13-204ENST00000397099 CDH15P55291 814 aa11.88□□□□□ -0.51
SEC13-204ENST00000397099 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.88□□□□□ -0.51
SEC13-204ENST00000397099 ALKBH6Q3KRA9 238 aa11.88□□□□□ -0.51
SEC13-204ENST00000397099 CCDC92Q53HC0 331 aaPredicted RBP11.88□□□□□ -0.51
SEC13-204ENST00000397099 SPATA46Q5T0L3 261 aa11.88□□□□□ -0.51
SEC13-204ENST00000397099 SLC27A4Q6P1M0 643 aa11.88□□□□□ -0.51
SEC13-204ENST00000397099 PEG10Q86TG7 708 aaKnown RBP11.88□□□□□ -0.51
SEC13-204ENST00000397099 TEX29Q8N6K0 151 aa11.88□□□□□ -0.51
SEC13-204ENST00000397099 OR9Q2Q8NGE9 314 aa11.88□□□□□ -0.51
SEC13-204ENST00000397099 OR52E2Q8NGJ4 325 aa11.88□□□□□ -0.51
SEC13-204ENST00000397099 RAB1CQ92928 201 aa11.88□□□□□ -0.51
SEC13-204ENST00000397099 HAVCR1Q96D42 359 aa11.88□□□□□ -0.51
SEC13-204ENST00000397099 TSSK2Q96PF2 358 aa11.88□□□□□ -0.51
SEC13-204ENST00000397099 CHID1Q9BWS9 393 aa11.88□□□□□ -0.51
SEC13-204ENST00000397099 TBC1D23Q9NUY8 699 aa11.88□□□□□ -0.51
SEC13-204ENST00000397099 CYB5R1Q9UHQ9 305 aa11.88□□□□□ -0.51
SEC13-204ENST00000397099 LHFPL6Q9Y693 200 aa11.88□□□□□ -0.51
SEC13-204ENST00000397099 DNHD1Q96M86 4753 aa11.87□□□□□ -0.51
SEC13-204ENST00000397099 OR6C68A6NDL8 312 aa11.87□□□□□ -0.51
SEC13-204ENST00000397099 IFNL4K9M1U5 179 aa11.87□□□□□ -0.51
SEC13-204ENST00000397099 DCTN6O00399 190 aa11.87□□□□□ -0.51
SEC13-204ENST00000397099 GNGT2O14610 69 aa11.87□□□□□ -0.51
SEC13-204ENST00000397099 RER1O15258 196 aa11.87□□□□□ -0.51
SEC13-204ENST00000397099 NCR1O76036 304 aa11.87□□□□□ -0.51
SEC13-204ENST00000397099 MPZL1O95297 269 aa11.87□□□□□ -0.51
SEC13-204ENST00000397099 IGHV1-46P01743 117 aa11.87□□□□□ -0.51
SEC13-204ENST00000397099 SELEP16581 610 aa11.87□□□□□ -0.51
SEC13-204ENST00000397099 TNFRSF1AP19438 455 aa11.87□□□□□ -0.51
SEC13-204ENST00000397099 MPV17P39210 176 aa11.87□□□□□ -0.51
SEC13-204ENST00000397099 DVL1P1P54792 670 aaPredicted RBP11.87□□□□□ -0.51
SEC13-204ENST00000397099 PSG7Q13046 419 aa11.87□□□□□ -0.51
SEC13-204ENST00000397099 CDK5R2Q13319 367 aa11.87□□□□□ -0.51
SEC13-204ENST00000397099 CLEC12AQ5QGZ9 265 aa11.87□□□□□ -0.51
SEC13-204ENST00000397099 FBXW12Q6X9E4 464 aa11.87□□□□□ -0.51
SEC13-204ENST00000397099 USP51Q70EK9 711 aa11.87□□□□□ -0.51
SEC13-204ENST00000397099 SDR9C7Q8NEX9 313 aa11.87□□□□□ -0.51
SEC13-204ENST00000397099 PROKR2Q8NFJ6 384 aa11.87□□□□□ -0.51
SEC13-204ENST00000397099 SPATA3Q8NHX4 192 aa11.87□□□□□ -0.51
SEC13-204ENST00000397099 YIPF5Q969M3 257 aa11.87□□□□□ -0.51
SEC13-204ENST00000397099 RAB39BQ96DA2 213 aa11.87□□□□□ -0.51
SEC13-204ENST00000397099 PITX2Q99697 317 aa11.87□□□□□ -0.51
SEC13-204ENST00000397099 REPIN1Q9BWE0 567 aaKnown RBP11.87□□□□□ -0.51
SEC13-204ENST00000397099 EGLN3Q9H6Z9 239 aa11.87□□□□□ -0.51
SEC13-204ENST00000397099 PURGQ9UJV8 347 aaKnown RBP11.87□□□□□ -0.51
SEC13-204ENST00000397099 TANC2Q9HCD6 1990 aa11.87□□□□□ -0.51
SEC13-204ENST00000397099 LRP5LA4QPB2 252 aa11.86□□□□□ -0.51
SEC13-204ENST00000397099 RIIAD1A6NNX1 92 aa11.86□□□□□ -0.51
SEC13-204ENST00000397099 LYNX1G3V0Z9 82 aa11.86□□□□□ -0.51
SEC13-204ENST00000397099 SPRY3O43610 288 aa11.86□□□□□ -0.51
SEC13-204ENST00000397099 DNAJC8O75937 253 aaPredicted RBP11.86□□□□□ -0.51
SEC13-204ENST00000397099 ATP5HO75947 161 aa11.86□□□□□ -0.51
SEC13-204ENST00000397099 UBOX5O94941 541 aa11.86□□□□□ -0.51
SEC13-204ENST00000397099 LYNX1P0DP58 116 aa11.86□□□□□ -0.51
SEC13-204ENST00000397099 ZNF3P17036 446 aa11.86□□□□□ -0.51
SEC13-204ENST00000397099 FMO3P31513 532 aa11.86□□□□□ -0.51
SEC13-204ENST00000397099 SLC25A1P53007 311 aa11.86□□□□□ -0.51
SEC13-204ENST00000397099 SCGB2A2Q13296 93 aa11.86□□□□□ -0.51
SEC13-204ENST00000397099 FLOT2Q14254 428 aa11.86□□□□□ -0.51
SEC13-204ENST00000397099 SLC35F1Q5T1Q4 408 aa11.86□□□□□ -0.51
SEC13-204ENST00000397099 SLC18B1Q6NT16 456 aa11.86□□□□□ -0.51
SEC13-204ENST00000397099 ADGRG5Q8IZF4 528 aa11.86□□□□□ -0.51
SEC13-204ENST00000397099 OR10G2Q8NGC3 310 aa11.86□□□□□ -0.51
SEC13-204ENST00000397099 TEX47Q8TBZ9 253 aa11.86□□□□□ -0.51
SEC13-204ENST00000397099 GIPC3Q8TF64 312 aa11.86□□□□□ -0.51
SEC13-204ENST00000397099 DNAJC9Q8WXX5 260 aa11.86□□□□□ -0.51
SEC13-204ENST00000397099 TMEM158Q8WZ71 300 aa11.86□□□□□ -0.51
SEC13-204ENST00000397099 SPTSSAQ969W0 71 aa11.86□□□□□ -0.51
SEC13-204ENST00000397099 ATF6BQ99941 703 aa11.86□□□□□ -0.51
SEC13-204ENST00000397099 TSSK6Q9BXA6 273 aa11.86□□□□□ -0.51
SEC13-204ENST00000397099 HCAR1Q9BXC0 346 aa11.86□□□□□ -0.51
SEC13-204ENST00000397099 TEX12Q9BXU0 123 aa11.86□□□□□ -0.51
SEC13-204ENST00000397099 MMADHCQ9H3L0 296 aaPredicted RBP11.86□□□□□ -0.51
SEC13-204ENST00000397099 ZNF556Q9HAH1 456 aa11.86□□□□□ -0.51
SEC13-204ENST00000397099 IL19Q9UHD0 177 aa11.86□□□□□ -0.51
SEC13-204ENST00000397099 STARD10Q9Y365 291 aa11.86□□□□□ -0.51
SEC13-204ENST00000397099 NOP16Q9Y3C1 178 aaKnown RBP11.86□□□□□ -0.51
SEC13-204ENST00000397099 U3KQV3 271 aa11.86□□□□□ -0.51
SEC13-204ENST00000397099 ZSCAN5BA6NJL1 495 aa11.85□□□□□ -0.51
SEC13-204ENST00000397099 SRD5A1P18405 259 aa11.85□□□□□ -0.51
SEC13-204ENST00000397099 PAICSP22234 425 aaKnown RBP11.85□□□□□ -0.51
SEC13-204ENST00000397099 GGT2P36268 569 aa11.85□□□□□ -0.51
SEC13-204ENST00000397099 TPTEP56180 551 aa11.85□□□□□ -0.51
SEC13-204ENST00000397099 MALLQ13021 153 aa11.85□□□□□ -0.51
SEC13-204ENST00000397099 TRIP10Q15642 601 aa11.85□□□□□ -0.51
SEC13-204ENST00000397099 TSTQ16762 297 aaKnown RBP11.85□□□□□ -0.51
SEC13-204ENST00000397099 TEX30Q5JUR7 227 aa11.85□□□□□ -0.51
SEC13-204ENST00000397099 COLCA1Q6ZS62 124 aa11.85□□□□□ -0.51
SEC13-204ENST00000397099 IL17RELQ6ZVW7 336 aa11.85□□□□□ -0.51
SEC13-204ENST00000397099 GLCCI1Q86VQ1 547 aa11.85□□□□□ -0.51
SEC13-204ENST00000397099 CLDND2Q8NHS1 167 aa11.85□□□□□ -0.51
SEC13-204ENST00000397099 CANT1Q8WVQ1 401 aa11.85□□□□□ -0.51
SEC13-204ENST00000397099 CMBLQ96DG6 245 aa11.85□□□□□ -0.51
SEC13-204ENST00000397099 CLPTM1LQ96KA5 538 aa11.85□□□□□ -0.51
SEC13-204ENST00000397099 DDOQ99489 341 aa11.85□□□□□ -0.51
SEC13-204ENST00000397099 C1QTNF5Q9BXJ0 243 aa11.85□□□□□ -0.51
SEC13-204ENST00000397099 CUBNO60494 3623 aa11.85□□□□□ -0.51
SEC13-204ENST00000397099 TRAV20A0A0B4J274 112 aa11.84□□□□□ -0.51
SEC13-204ENST00000397099 PHF1O43189 567 aaPredicted RBP11.84□□□□□ -0.51
SEC13-204ENST00000397099 CDC14BO60729 498 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms