RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 FGF16O43320 207 aa12.44□□□□□ -0.42
NUP98-204ENST00000397004 IGKV3-11P04433 115 aa12.44□□□□□ -0.42
NUP98-204ENST00000397004 ERCC1P07992 297 aaPredicted RBP12.44□□□□□ -0.42
NUP98-204ENST00000397004 PGAM2P15259 253 aa12.44□□□□□ -0.42
NUP98-204ENST00000397004 PNLIPRP2P54317 469 aa12.44□□□□□ -0.42
NUP98-204ENST00000397004 TOMM20Q15388 145 aa12.44□□□□□ -0.42
NUP98-204ENST00000397004 TMEM71Q6P5X7 295 aa12.44□□□□□ -0.42
NUP98-204ENST00000397004 ACOT7LQ6ZUV0 252 aa12.44□□□□□ -0.42
NUP98-204ENST00000397004 ADGRE4PQ86SQ3 457 aa12.44□□□□□ -0.42
NUP98-204ENST00000397004 ZNF440Q8IYI8 595 aa12.44□□□□□ -0.42
NUP98-204ENST00000397004 PNO1Q9NRX1 252 aaKnown RBP12.44□□□□□ -0.42
NUP98-204ENST00000397004 ASF1BQ9NVP2 202 aa12.44□□□□□ -0.42
NUP98-204ENST00000397004 FAM25EA8MYX2 175 aa12.44□□□□□ -0.42
NUP98-204ENST00000397004 DDAH2O95865 285 aa12.44□□□□□ -0.42
NUP98-204ENST00000397004 FAM157CP0CG43 387 aa12.44□□□□□ -0.42
NUP98-204ENST00000397004 GNB3P16520 340 aa12.44□□□□□ -0.42
NUP98-204ENST00000397004 HRH1P35367 487 aa12.44□□□□□ -0.42
NUP98-204ENST00000397004 STARP49675 285 aa12.44□□□□□ -0.42
NUP98-204ENST00000397004 RPL27P61353 136 aaKnown RBP12.44□□□□□ -0.42
NUP98-204ENST00000397004 ZP2Q05996 745 aa12.44□□□□□ -0.42
NUP98-204ENST00000397004 FZD2Q14332 565 aa12.44□□□□□ -0.42
NUP98-204ENST00000397004 C1orf100Q5SVJ3 147 aa12.44□□□□□ -0.42
NUP98-204ENST00000397004 ZNF813Q6ZN06 617 aa12.44□□□□□ -0.42
NUP98-204ENST00000397004 NICN1Q9BSH3 213 aa12.44□□□□□ -0.42
NUP98-204ENST00000397004 OR8D2Q9GZM6 311 aa12.44□□□□□ -0.42
NUP98-204ENST00000397004 ZNF768Q9H5H4 540 aaKnown RBP12.44□□□□□ -0.42
NUP98-204ENST00000397004 ZNF175Q9Y473 711 aa12.44□□□□□ -0.42
NUP98-204ENST00000397004 RTTNQ86VV8 2226 aa12.44□□□□□ -0.42
NUP98-204ENST00000397004 FER1L5A0AVI2 2057 aa12.44□□□□□ -0.42
NUP98-204ENST00000397004 A0A0A6YYD4 124 aa12.43□□□□□ -0.42
NUP98-204ENST00000397004 HPGDP15428 266 aa12.43□□□□□ -0.42
NUP98-204ENST00000397004 DCDP81605 110 aaKnown RBP12.43□□□□□ -0.42
NUP98-204ENST00000397004 CDNFQ49AH0 187 aa12.43□□□□□ -0.42
NUP98-204ENST00000397004 SLC18B1Q6NT16 456 aa12.43□□□□□ -0.42
NUP98-204ENST00000397004 ZSCAN4Q8NAM6 433 aaPredicted RBP12.43□□□□□ -0.42
NUP98-204ENST00000397004 ZNF721Q8TF20 911 aa12.43□□□□□ -0.42
NUP98-204ENST00000397004 CCDC107Q8WV48 283 aa12.43□□□□□ -0.42
NUP98-204ENST00000397004 METTL21AQ8WXB1 218 aa12.43□□□□□ -0.42
NUP98-204ENST00000397004 ADAT3Q96EY9 351 aaPredicted RBP12.43□□□□□ -0.42
NUP98-204ENST00000397004 KANTRA0A1W2PQU2 76 aa12.43□□□□□ -0.42
NUP98-204ENST00000397004 EEF1E1-BLOC1S5C9J1V9 151 aa12.43□□□□□ -0.42
NUP98-204ENST00000397004 DXOO77932 396 aaKnown RBP12.43□□□□□ -0.42
NUP98-204ENST00000397004 NSA2O95478 260 aaKnown RBP12.43□□□□□ -0.42
NUP98-204ENST00000397004 PPICP45877 212 aa12.43□□□□□ -0.42
NUP98-204ENST00000397004 GFERP55789 205 aa12.43□□□□□ -0.42
NUP98-204ENST00000397004 TAF8Q7Z7C8 310 aa12.43□□□□□ -0.42
NUP98-204ENST00000397004 TMEM200AQ86VY9 491 aa12.43□□□□□ -0.42
NUP98-204ENST00000397004 C9orf40Q8IXQ3 194 aa12.43□□□□□ -0.42
NUP98-204ENST00000397004 CASTOR1Q8WTX7 329 aa12.43□□□□□ -0.42
NUP98-204ENST00000397004 PDCD10Q9BUL8 212 aa12.43□□□□□ -0.42
NUP98-204ENST00000397004 S1PR5Q9H228 398 aa12.43□□□□□ -0.42
NUP98-204ENST00000397004 SLC2A8Q9NY64 477 aa12.43□□□□□ -0.42
NUP98-204ENST00000397004 FAM221BA6H8Z2 402 aa12.43□□□□□ -0.42
NUP98-204ENST00000397004 P2RY10O00398 339 aa12.43□□□□□ -0.42
NUP98-204ENST00000397004 FADS1O60427 444 aa12.43□□□□□ -0.42
NUP98-204ENST00000397004 AGTR1P30556 359 aa12.43□□□□□ -0.42
NUP98-204ENST00000397004 NPBWR1P48145 328 aa12.43□□□□□ -0.42
NUP98-204ENST00000397004 ZNF528Q3MIS6 628 aa12.43□□□□□ -0.42
NUP98-204ENST00000397004 DMRTC1Q5HYR2 192 aa12.43□□□□□ -0.42
NUP98-204ENST00000397004 OOSP2Q86WS3 158 aa12.43□□□□□ -0.42
NUP98-204ENST00000397004 OR52N5Q8NH56 324 aa12.43□□□□□ -0.42
NUP98-204ENST00000397004 ASB13Q8WXK3 278 aa12.43□□□□□ -0.42
NUP98-204ENST00000397004 PIK3IP1Q96FE7 263 aa12.43□□□□□ -0.42
NUP98-204ENST00000397004 CCNL2Q96S94 520 aaPredicted RBP12.43□□□□□ -0.42
NUP98-204ENST00000397004 ASXL3Q9C0F0 2248 aa12.43□□□□□ -0.42
NUP98-204ENST00000397004 IGHV5-51A0A0C4DH38 117 aa12.43□□□□□ -0.42
NUP98-204ENST00000397004 CD1CP29017 333 aa12.43□□□□□ -0.42
NUP98-204ENST00000397004 OR1D4P47884 311 aa12.43□□□□□ -0.42
NUP98-204ENST00000397004 TRAPPC6BQ86SZ2 158 aa12.43□□□□□ -0.42
NUP98-204ENST00000397004 OR13C3Q8NGS6 347 aa12.43□□□□□ -0.42
NUP98-204ENST00000397004 SPACA5Q96QH8 159 aa12.43□□□□□ -0.42
NUP98-204ENST00000397004 SCPEP1Q9HB40 452 aa12.43□□□□□ -0.42
NUP98-204ENST00000397004 TMEM100Q9NV29 134 aa12.43□□□□□ -0.42
NUP98-204ENST00000397004 CELSR3Q9NYQ7 3312 aa12.43□□□□□ -0.42
NUP98-204ENST00000397004 B4DGG1 531 aa12.42□□□□□ -0.42
NUP98-204ENST00000397004 F8VVB4 439 aa12.42□□□□□ -0.42
NUP98-204ENST00000397004 F8VWA3 439 aa12.42□□□□□ -0.42
NUP98-204ENST00000397004 VSIG8P0DPA2 414 aa12.42□□□□□ -0.42
NUP98-204ENST00000397004 CD79AP11912 226 aa12.42□□□□□ -0.42
NUP98-204ENST00000397004 ARRB1P49407 418 aaPredicted RBP12.42□□□□□ -0.42
NUP98-204ENST00000397004 C10orf91Q5T1B1 145 aa12.42□□□□□ -0.42
NUP98-204ENST00000397004 C16orf47Q6ZP98 133 aaPredicted RBP12.42□□□□□ -0.42
NUP98-204ENST00000397004 KCTD9Q7L273 389 aa12.42□□□□□ -0.42
NUP98-204ENST00000397004 LAT2Q9GZY6 243 aa12.42□□□□□ -0.42
NUP98-204ENST00000397004 PLA2G2EQ9NZK7 142 aa12.42□□□□□ -0.42
NUP98-204ENST00000397004 MED12Q93074 2177 aa12.42□□□□□ -0.42
NUP98-204ENST00000397004 PLPP3O14495 311 aa12.42□□□□□ -0.42
NUP98-204ENST00000397004 NFYBP25208 207 aa12.42□□□□□ -0.42
NUP98-204ENST00000397004 CTHP32929 405 aa12.42□□□□□ -0.42
NUP98-204ENST00000397004 SKP1P63208 163 aa12.42□□□□□ -0.42
NUP98-204ENST00000397004 SGCBQ16585 318 aa12.42□□□□□ -0.42
NUP98-204ENST00000397004 DCXRQ7Z4W1 244 aa12.42□□□□□ -0.42
NUP98-204ENST00000397004 TMEM230Q96A57 120 aa12.42□□□□□ -0.42
NUP98-204ENST00000397004 ZNF285Q96NJ3 590 aa12.42□□□□□ -0.42
NUP98-204ENST00000397004 GAL3ST4Q96RP7 486 aa12.42□□□□□ -0.42
NUP98-204ENST00000397004 ZNF587Q96SQ5 575 aaPredicted RBP12.42□□□□□ -0.42
NUP98-204ENST00000397004 TRAV36DV7A0A075B6V5 113 aa12.42□□□□□ -0.42
NUP98-204ENST00000397004 C2orf72A6NCS6 295 aa12.42□□□□□ -0.42
NUP98-204ENST00000397004 ZNF98A6NK75 572 aa12.42□□□□□ -0.42
NUP98-204ENST00000397004 F5H0A9 414 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms