RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 UTS2O95399 124 aa11.93□□□□□ -0.5
TRIM40-207ENST00000396581 MT-ATP6P00846 226 aa11.93□□□□□ -0.5
TRIM40-207ENST00000396581 IGHMP01871 453 aa11.93□□□□□ -0.5
TRIM40-207ENST00000396581 HPGDP15428 266 aa11.93□□□□□ -0.5
TRIM40-207ENST00000396581 NME1P15531 152 aaKnown RBP11.93□□□□□ -0.5
TRIM40-207ENST00000396581 ZNF28P17035 718 aa11.93□□□□□ -0.5
TRIM40-207ENST00000396581 MAOAP21397 527 aa11.93□□□□□ -0.5
TRIM40-207ENST00000396581 EIF1AXP47813 144 aaKnown RBP11.93□□□□□ -0.5
TRIM40-207ENST00000396581 RIDAP52758 137 aaKnown RBP11.93□□□□□ -0.5
TRIM40-207ENST00000396581 SERTAD2Q14140 314 aa11.93□□□□□ -0.5
TRIM40-207ENST00000396581 ERV3-1Q14264 604 aa11.93□□□□□ -0.5
TRIM40-207ENST00000396581 SGCBQ16585 318 aa11.93□□□□□ -0.5
TRIM40-207ENST00000396581 C3orf33Q6P1S2 294 aa11.93□□□□□ -0.5
TRIM40-207ENST00000396581 SFTPA2Q8IWL1 248 aa11.93□□□□□ -0.5
TRIM40-207ENST00000396581 PAQR4Q8N4S7 273 aaPredicted RBP11.93□□□□□ -0.5
TRIM40-207ENST00000396581 NKAIN3Q8N8D7 197 aa11.93□□□□□ -0.5
TRIM40-207ENST00000396581 C19orf47Q8N9M1 422 aaKnown RBP11.93□□□□□ -0.5
TRIM40-207ENST00000396581 SLC30A7Q8NEW0 376 aa11.93□□□□□ -0.5
TRIM40-207ENST00000396581 OR51A2Q8NGJ7 313 aa11.93□□□□□ -0.5
TRIM40-207ENST00000396581 SLC37A2Q8TED4 501 aa11.93□□□□□ -0.5
TRIM40-207ENST00000396581 SEC22AQ96IW7 307 aa11.93□□□□□ -0.5
TRIM40-207ENST00000396581 TSNAXQ99598 290 aaKnown RBP11.93□□□□□ -0.5
TRIM40-207ENST00000396581 ABHD6Q9BV23 337 aa11.93□□□□□ -0.5
TRIM40-207ENST00000396581 SLC39A1Q9NY26 324 aa11.93□□□□□ -0.5
TRIM40-207ENST00000396581 CGGBP1Q9UFW8 167 aaPredicted RBP11.93□□□□□ -0.5
TRIM40-207ENST00000396581 LRP12Q9Y561 859 aa11.93□□□□□ -0.5
TRIM40-207ENST00000396581 TMEM235A6NFC5 223 aa11.92□□□□□ -0.5
TRIM40-207ENST00000396581 ZNF98A6NK75 572 aa11.92□□□□□ -0.5
TRIM40-207ENST00000396581 RAB27BO00194 218 aa11.92□□□□□ -0.5
TRIM40-207ENST00000396581 GPR31O00270 319 aa11.92□□□□□ -0.5
TRIM40-207ENST00000396581 RAD1O60671 282 aa11.92□□□□□ -0.5
TRIM40-207ENST00000396581 HOXB1P14653 301 aaPredicted RBP11.92□□□□□ -0.5
TRIM40-207ENST00000396581 PRKXP51817 358 aa11.92□□□□□ -0.5
TRIM40-207ENST00000396581 B2MP61769 119 aa11.92□□□□□ -0.5
TRIM40-207ENST00000396581 C1orf61Q13536 156 aa11.92□□□□□ -0.5
TRIM40-207ENST00000396581 LRRC37A5PQ49AS3 106 aa11.92□□□□□ -0.5
TRIM40-207ENST00000396581 SCGB2B2Q4G0G5 96 aa11.92□□□□□ -0.5
TRIM40-207ENST00000396581 RNASE10Q5GAN6 216 aaKnown RBP11.92□□□□□ -0.5
TRIM40-207ENST00000396581 BEX5Q5H9J7 111 aa11.92□□□□□ -0.5
TRIM40-207ENST00000396581 OR52N5Q8NH56 324 aa11.92□□□□□ -0.5
TRIM40-207ENST00000396581 THAP6Q8TBB0 222 aa11.92□□□□□ -0.5
TRIM40-207ENST00000396581 FOXRED1Q96CU9 486 aaPredicted RBP11.92□□□□□ -0.5
TRIM40-207ENST00000396581 PHB2Q99623 299 aa11.92□□□□□ -0.5
TRIM40-207ENST00000396581 CMKLR1Q99788 373 aa11.92□□□□□ -0.5
TRIM40-207ENST00000396581 SAV1Q9H4B6 383 aaPredicted RBP11.92□□□□□ -0.5
TRIM40-207ENST00000396581 GDF2Q9UK05 429 aaPredicted RBP11.92□□□□□ -0.5
TRIM40-207ENST00000396581 HHLA2Q9UM44 414 aa11.92□□□□□ -0.5
TRIM40-207ENST00000396581 FARSAQ9Y285 508 aaKnown RBP11.92□□□□□ -0.5
TRIM40-207ENST00000396581 R4GMQ9 66 aa11.92□□□□□ -0.5
TRIM40-207ENST00000396581 SDK1Q7Z5N4 2213 aa11.92□□□□□ -0.5
TRIM40-207ENST00000396581 TEX13DA0A0J9YY54 714 aaPredicted RBP11.91□□□□□ -0.5
TRIM40-207ENST00000396581 OR2W5A6NFC9 320 aa11.91□□□□□ -0.5
TRIM40-207ENST00000396581 NPIPB7O75200 414 aa11.91□□□□□ -0.5
TRIM40-207ENST00000396581 DXOO77932 396 aaKnown RBP11.91□□□□□ -0.5
TRIM40-207ENST00000396581 HLA-DQA2P01906 255 aa11.91□□□□□ -0.5
TRIM40-207ENST00000396581 DCNP07585 359 aaKnown RBP11.91□□□□□ -0.5
TRIM40-207ENST00000396581 SLC37A1P57057 533 aa11.91□□□□□ -0.5
TRIM40-207ENST00000396581 CXADRP78310 365 aa11.91□□□□□ -0.5
TRIM40-207ENST00000396581 SCRN3Q0VDG4 424 aa11.91□□□□□ -0.5
TRIM40-207ENST00000396581 BIKQ13323 160 aa11.91□□□□□ -0.5
TRIM40-207ENST00000396581 ACKR1Q16570 336 aa11.91□□□□□ -0.5
TRIM40-207ENST00000396581 PRAMEF17Q5VTA0 474 aa11.91□□□□□ -0.5
TRIM40-207ENST00000396581 RAB11FIP2Q7L804 512 aa11.91□□□□□ -0.5
TRIM40-207ENST00000396581 MAMDC2Q7Z304 686 aaPredicted RBP11.91□□□□□ -0.5
TRIM40-207ENST00000396581 AVL9Q8NBF6 648 aa11.91□□□□□ -0.5
TRIM40-207ENST00000396581 INO80EQ8NBZ0 244 aaPredicted RBP11.91□□□□□ -0.5
TRIM40-207ENST00000396581 OR4S1Q8NGB4 309 aa11.91□□□□□ -0.5
TRIM40-207ENST00000396581 MAFAQ8NHW3 353 aaPredicted RBP11.91□□□□□ -0.5
TRIM40-207ENST00000396581 ZNF563Q8TA94 476 aa11.91□□□□□ -0.5
TRIM40-207ENST00000396581 METTL21AQ8WXB1 218 aa11.91□□□□□ -0.5
TRIM40-207ENST00000396581 NUDT16L1Q9BRJ7 211 aaKnown RBP11.91□□□□□ -0.5
TRIM40-207ENST00000396581 IER2Q9BTL4 223 aa11.91□□□□□ -0.5
TRIM40-207ENST00000396581 TXNIPQ9H3M7 391 aa11.91□□□□□ -0.5
TRIM40-207ENST00000396581 RAB22AQ9UL26 194 aa11.91□□□□□ -0.5
TRIM40-207ENST00000396581 TMED7Q9Y3B3 224 aa11.91□□□□□ -0.5
TRIM40-207ENST00000396581 TDRD6O60522 2096 aaKnown RBP11.91□□□□□ -0.5
TRIM40-207ENST00000396581 F5H0A9 414 aaPredicted RBP11.91□□□□□ -0.5
TRIM40-207ENST00000396581 EFSO43281 561 aa11.91□□□□□ -0.5
TRIM40-207ENST00000396581 SLC16A7O60669 478 aa11.91□□□□□ -0.5
TRIM40-207ENST00000396581 DUS4LO95620 317 aaKnown RBP11.91□□□□□ -0.5
TRIM40-207ENST00000396581 CRHP06850 196 aa11.91□□□□□ -0.5
TRIM40-207ENST00000396581 SPARCP09486 303 aa11.91□□□□□ -0.5
TRIM40-207ENST00000396581 IL13RA1P78552 427 aa11.91□□□□□ -0.5
TRIM40-207ENST00000396581 QRFPP83859 136 aa11.91□□□□□ -0.5
TRIM40-207ENST00000396581 HHEXQ03014 270 aa11.91□□□□□ -0.5
TRIM40-207ENST00000396581 ZNF117Q03924 483 aa11.91□□□□□ -0.5
TRIM40-207ENST00000396581 GUCA2BQ16661 112 aa11.91□□□□□ -0.5
TRIM40-207ENST00000396581 FJX1Q86VR8 437 aa11.91□□□□□ -0.5
TRIM40-207ENST00000396581 OR4D6Q8NGJ1 314 aa11.91□□□□□ -0.5
TRIM40-207ENST00000396581 DNASE2BQ8WZ79 361 aa11.91□□□□□ -0.5
TRIM40-207ENST00000396581 NARS2Q96I59 477 aaKnown RBP11.91□□□□□ -0.5
TRIM40-207ENST00000396581 ZNF285Q96NJ3 590 aa11.91□□□□□ -0.5
TRIM40-207ENST00000396581 RTN4RQ9BZR6 473 aa11.91□□□□□ -0.5
TRIM40-207ENST00000396581 ZMAT3Q9HA38 289 aaKnown RBP11.91□□□□□ -0.5
TRIM40-207ENST00000396581 G6PC2Q9NQR9 355 aa11.91□□□□□ -0.5
TRIM40-207ENST00000396581 MBD2Q9UBB5 411 aa11.91□□□□□ -0.5
TRIM40-207ENST00000396581 ZNF629Q9UEG4 869 aaPredicted RBP11.91□□□□□ -0.5
TRIM40-207ENST00000396581 DCDC2BA2VCK2 349 aa11.9□□□□□ -0.5
TRIM40-207ENST00000396581 FITM1A5D6W6 292 aa11.9□□□□□ -0.5
TRIM40-207ENST00000396581 FRG2CA6NGY1 282 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms