RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 TMEM200CA6NKL6 621 aa14.03□□□□□ -0.16
HOXA3-202ENST00000396352 OR2F2O95006 317 aa14.03□□□□□ -0.16
HOXA3-202ENST00000396352 MPZP25189 248 aa14.03□□□□□ -0.16
HOXA3-202ENST00000396352 LUMP51884 338 aaPredicted RBP14.03□□□□□ -0.16
HOXA3-202ENST00000396352 UNC119Q13432 240 aa14.03□□□□□ -0.16
HOXA3-202ENST00000396352 OR2F1Q13607 317 aa14.03□□□□□ -0.16
HOXA3-202ENST00000396352 MEF2DQ14814 521 aa14.03□□□□□ -0.16
HOXA3-202ENST00000396352 VWA2Q5GFL6 755 aa14.03□□□□□ -0.16
HOXA3-202ENST00000396352 LMX1AQ8TE12 382 aa14.03□□□□□ -0.16
HOXA3-202ENST00000396352 FBXW5Q969U6 566 aa14.03□□□□□ -0.16
HOXA3-202ENST00000396352 CMBLQ96DG6 245 aa14.03□□□□□ -0.16
HOXA3-202ENST00000396352 VRK1Q99986 396 aaPredicted RBP14.03□□□□□ -0.16
HOXA3-202ENST00000396352 B3GNT4Q9C0J1 378 aa14.03□□□□□ -0.16
HOXA3-202ENST00000396352 CNTD2Q9H8S5 307 aa14.03□□□□□ -0.16
HOXA3-202ENST00000396352 ARID1BQ8NFD5 2236 aaPredicted RBP14.03□□□□□ -0.16
HOXA3-202ENST00000396352 MS4A18H0YCH9 400 aa14.03□□□□□ -0.16
HOXA3-202ENST00000396352 AHSA1O95433 338 aa14.03□□□□□ -0.16
HOXA3-202ENST00000396352 IL2RAP01589 272 aa14.03□□□□□ -0.16
HOXA3-202ENST00000396352 APOC3P02656 99 aa14.03□□□□□ -0.16
HOXA3-202ENST00000396352 HLA-GP17693 338 aa14.03□□□□□ -0.16
HOXA3-202ENST00000396352 PPP1R1AQ13522 171 aa14.03□□□□□ -0.16
HOXA3-202ENST00000396352 MS4A18Q3C1V0 323 aa14.03□□□□□ -0.16
HOXA3-202ENST00000396352 LRRC37A5PQ49AS3 106 aa14.03□□□□□ -0.16
HOXA3-202ENST00000396352 SLC22A6Q4U2R8 563 aa14.03□□□□□ -0.16
HOXA3-202ENST00000396352 ZNF813Q6ZN06 617 aa14.03□□□□□ -0.16
HOXA3-202ENST00000396352 LYG2Q86SG7 212 aa14.03□□□□□ -0.16
HOXA3-202ENST00000396352 PPP1R1CQ8WVI7 109 aa14.03□□□□□ -0.16
HOXA3-202ENST00000396352 ASB10Q8WXI3 467 aa14.03□□□□□ -0.16
HOXA3-202ENST00000396352 NKD1Q969G9 470 aa14.03□□□□□ -0.16
HOXA3-202ENST00000396352 SEC22AQ96IW7 307 aa14.03□□□□□ -0.16
HOXA3-202ENST00000396352 CST11Q9H112 138 aa14.03□□□□□ -0.16
HOXA3-202ENST00000396352 TMEM269A0A1B0GVZ9 245 aa14.03□□□□□ -0.16
HOXA3-202ENST00000396352 KANTRA0A1W2PQU2 76 aa14.03□□□□□ -0.16
HOXA3-202ENST00000396352 DISC1C4P0D8 188 aa14.03□□□□□ -0.16
HOXA3-202ENST00000396352 P2RY10O00398 339 aa14.03□□□□□ -0.16
HOXA3-202ENST00000396352 SOX1O00570 391 aaPredicted RBP14.03□□□□□ -0.16
HOXA3-202ENST00000396352 NME1P15531 152 aaKnown RBP14.03□□□□□ -0.16
HOXA3-202ENST00000396352 ATP1B3P54709 279 aa14.03□□□□□ -0.16
HOXA3-202ENST00000396352 TDGQ13569 410 aa14.03□□□□□ -0.16
HOXA3-202ENST00000396352 ZNF704Q6ZNC4 412 aaPredicted RBP14.03□□□□□ -0.16
HOXA3-202ENST00000396352 TRAPPC6BQ86SZ2 158 aa14.03□□□□□ -0.16
HOXA3-202ENST00000396352 C17orf82Q86X59 251 aaPredicted RBP14.03□□□□□ -0.16
HOXA3-202ENST00000396352 GVQW1Q8N7I0 195 aa14.03□□□□□ -0.16
HOXA3-202ENST00000396352 PRRT1Q99946 306 aa14.03□□□□□ -0.16
HOXA3-202ENST00000396352 PHF3Q92576 2039 aaKnown RBP14.03□□□□□ -0.16
HOXA3-202ENST00000396352 EXPH5Q8NEV8 1989 aa14.02□□□□□ -0.16
HOXA3-202ENST00000396352 CAPZA1P52907 286 aa14.02□□□□□ -0.16
HOXA3-202ENST00000396352 QRFPP83859 136 aa14.02□□□□□ -0.16
HOXA3-202ENST00000396352 TAF13Q15543 124 aa14.02□□□□□ -0.16
HOXA3-202ENST00000396352 NSDHLQ15738 373 aa14.02□□□□□ -0.16
HOXA3-202ENST00000396352 CDNFQ49AH0 187 aa14.02□□□□□ -0.16
HOXA3-202ENST00000396352 OR1N1Q8NGS0 311 aa14.02□□□□□ -0.16
HOXA3-202ENST00000396352 PDCD10Q9BUL8 212 aa14.02□□□□□ -0.16
HOXA3-202ENST00000396352 SEC16AO15027 2179 aa14.02□□□□□ -0.16
HOXA3-202ENST00000396352 CXADRP78310 365 aa14.02□□□□□ -0.17
HOXA3-202ENST00000396352 RNASE10Q5GAN6 216 aaKnown RBP14.02□□□□□ -0.17
HOXA3-202ENST00000396352 BEX5Q5H9J7 111 aa14.02□□□□□ -0.17
HOXA3-202ENST00000396352 OR52W1Q6IF63 320 aa14.02□□□□□ -0.17
HOXA3-202ENST00000396352 LIN54Q6MZP7 749 aa14.02□□□□□ -0.17
HOXA3-202ENST00000396352 RLN3Q8WXF3 142 aa14.02□□□□□ -0.17
HOXA3-202ENST00000396352 DAZLQ92904 295 aaKnown RBP14.02□□□□□ -0.17
HOXA3-202ENST00000396352 KCNK17Q96T54 332 aa14.02□□□□□ -0.17
HOXA3-202ENST00000396352 RAB22AQ9UL26 194 aa14.02□□□□□ -0.17
HOXA3-202ENST00000396352 LOC100509620A0A075B734 347 aa14.02□□□□□ -0.17
HOXA3-202ENST00000396352 DNASE2O00115 360 aaPredicted RBP14.02□□□□□ -0.17
HOXA3-202ENST00000396352 ZNF823P16415 610 aa14.02□□□□□ -0.17
HOXA3-202ENST00000396352 TMEM244Q5VVB8 128 aa14.02□□□□□ -0.17
HOXA3-202ENST00000396352 GKN2Q86XP6 184 aa14.02□□□□□ -0.17
HOXA3-202ENST00000396352 PRSS58Q8IYP2 241 aa14.02□□□□□ -0.17
HOXA3-202ENST00000396352 MITD1Q8WV92 249 aa14.02□□□□□ -0.17
HOXA3-202ENST00000396352 FOXRED1Q96CU9 486 aaPredicted RBP14.02□□□□□ -0.17
HOXA3-202ENST00000396352 MVB12AQ96EY5 273 aa14.02□□□□□ -0.17
HOXA3-202ENST00000396352 COPS7AQ9UBW8 275 aa14.02□□□□□ -0.17
HOXA3-202ENST00000396352 C9orf170A2RU37 121 aa14.01□□□□□ -0.17
HOXA3-202ENST00000396352 OR2T1O43869 369 aa14.01□□□□□ -0.17
HOXA3-202ENST00000396352 ICAM2P13598 275 aa14.01□□□□□ -0.17
HOXA3-202ENST00000396352 CNR1P21554 472 aa14.01□□□□□ -0.17
HOXA3-202ENST00000396352 DLSTP36957 453 aa14.01□□□□□ -0.17
HOXA3-202ENST00000396352 ZMYND11Q15326 602 aa14.01□□□□□ -0.17
HOXA3-202ENST00000396352 RAB12Q6IQ22 244 aa14.01□□□□□ -0.17
HOXA3-202ENST00000396352 SLC29A4Q7RTT9 530 aa14.01□□□□□ -0.17
HOXA3-202ENST00000396352 FAM206AQ9NX38 181 aa14.01□□□□□ -0.17
HOXA3-202ENST00000396352 COMMD9Q9P000 198 aa14.01□□□□□ -0.17
HOXA3-202ENST00000396352 A0A1B0GW55 424 aa14.01□□□□□ -0.17
HOXA3-202ENST00000396352 DUX4L2P0CJ85 424 aa14.01□□□□□ -0.17
HOXA3-202ENST00000396352 DUX4L3P0CJ86 424 aa14.01□□□□□ -0.17
HOXA3-202ENST00000396352 DUX4L4P0CJ87 422 aa14.01□□□□□ -0.17
HOXA3-202ENST00000396352 DUX4L5P0CJ88 424 aa14.01□□□□□ -0.17
HOXA3-202ENST00000396352 DUX4L6P0CJ89 424 aa14.01□□□□□ -0.17
HOXA3-202ENST00000396352 DUX4L7P0CJ90 424 aa14.01□□□□□ -0.17
HOXA3-202ENST00000396352 CD96P40200 585 aa14.01□□□□□ -0.17
HOXA3-202ENST00000396352 DEGS2Q6QHC5 323 aa14.01□□□□□ -0.17
HOXA3-202ENST00000396352 ACOT7LQ6ZUV0 252 aa14.01□□□□□ -0.17
HOXA3-202ENST00000396352 OR2W3Q7Z3T1 314 aa14.01□□□□□ -0.17
HOXA3-202ENST00000396352 ZDHHC22Q8N966 263 aa14.01□□□□□ -0.17
HOXA3-202ENST00000396352 OR52N4Q8NGI2 321 aa14.01□□□□□ -0.17
HOXA3-202ENST00000396352 OR1L3Q8NH93 324 aa14.01□□□□□ -0.17
HOXA3-202ENST00000396352 NUDCD2Q8WVJ2 157 aa14.01□□□□□ -0.17
HOXA3-202ENST00000396352 RNF133Q8WVZ7 376 aa14.01□□□□□ -0.17
HOXA3-202ENST00000396352 FGGYQ96C11 551 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms