RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 IFNGP01579 166 aa4.8□□□□□ -1.64
VPS41-203ENST00000395969 HEXBP07686 556 aa4.8□□□□□ -1.64
VPS41-203ENST00000395969 C8orf89P0DMQ9 161 aa4.8□□□□□ -1.64
VPS41-203ENST00000395969 EPXP11678 715 aa4.8□□□□□ -1.64
VPS41-203ENST00000395969 ANXA7P20073 488 aaKnown RBP4.8□□□□□ -1.64
VPS41-203ENST00000395969 CSRP1P21291 193 aaKnown RBP4.8□□□□□ -1.64
VPS41-203ENST00000395969 AKR1C3P42330 323 aa4.8□□□□□ -1.64
VPS41-203ENST00000395969 AP3S2P59780 193 aa4.8□□□□□ -1.64
VPS41-203ENST00000395969 RPP30P78346 268 aaKnown RBP4.8□□□□□ -1.64
VPS41-203ENST00000395969 USF2Q15853 346 aaPredicted RBP4.8□□□□□ -1.64
VPS41-203ENST00000395969 ZNF674Q2M3X9 581 aa4.8□□□□□ -1.64
VPS41-203ENST00000395969 LINC00303Q3SY05 128 aa4.8□□□□□ -1.64
VPS41-203ENST00000395969 NKAIN1Q4KMZ8 207 aa4.8□□□□□ -1.64
VPS41-203ENST00000395969 UBE2NLQ5JXB2 153 aa4.8□□□□□ -1.64
VPS41-203ENST00000395969 APOOLQ6UXV4 268 aa4.8□□□□□ -1.64
VPS41-203ENST00000395969 SSX9Q7RTT3 188 aa4.8□□□□□ -1.64
VPS41-203ENST00000395969 RD3Q7Z3Z2 195 aa4.8□□□□□ -1.64
VPS41-203ENST00000395969 CPEB2Q7Z5Q1 589 aaKnown RBP4.8□□□□□ -1.64
VPS41-203ENST00000395969 NRMQ8IXM6 262 aa4.8□□□□□ -1.64
VPS41-203ENST00000395969 SPAG16Q8N0X2 631 aa4.8□□□□□ -1.64
VPS41-203ENST00000395969 OR5M1Q8NGP8 315 aa4.8□□□□□ -1.64
VPS41-203ENST00000395969 ABHD4Q8TB40 342 aa4.8□□□□□ -1.64
VPS41-203ENST00000395969 SMAP2Q8WU79 429 aaPredicted RBP4.8□□□□□ -1.64
VPS41-203ENST00000395969 MMABQ96EY8 250 aaPredicted RBP4.8□□□□□ -1.64
VPS41-203ENST00000395969 PGLYRP3Q96LB9 341 aa4.8□□□□□ -1.64
VPS41-203ENST00000395969 IP6K3Q96PC2 410 aa4.8□□□□□ -1.64
VPS41-203ENST00000395969 TCEAL7Q9BRU2 100 aa4.8□□□□□ -1.64
VPS41-203ENST00000395969 FXYD6Q9H0Q3 95 aa4.8□□□□□ -1.64
VPS41-203ENST00000395969 GHRLQ9UBU3 117 aa4.8□□□□□ -1.64
VPS41-203ENST00000395969 RARRES3Q9UL19 164 aa4.8□□□□□ -1.64
VPS41-203ENST00000395969 SPAG17Q6Q759 2223 aa4.8□□□□□ -1.64
VPS41-203ENST00000395969 TRBV5-5A0A0J9YX44 114 aa4.8□□□□□ -1.64
VPS41-203ENST00000395969 RFPL4AA6NLU0 287 aa4.8□□□□□ -1.64
VPS41-203ENST00000395969 F5H5P2 479 aa4.8□□□□□ -1.64
VPS41-203ENST00000395969 RFPL4AL1F8VTS6 287 aa4.8□□□□□ -1.64
VPS41-203ENST00000395969 ZNF432O94892 652 aa4.8□□□□□ -1.64
VPS41-203ENST00000395969 AKR7A3O95154 331 aa4.8□□□□□ -1.64
VPS41-203ENST00000395969 CD14P08571 375 aa4.8□□□□□ -1.64
VPS41-203ENST00000395969 VSIG10L2P0DP72 767 aa4.8□□□□□ -1.64
VPS41-203ENST00000395969 PRG2P13727 222 aa4.8□□□□□ -1.64
VPS41-203ENST00000395969 SNRPBP14678 240 aaKnown RBP4.8□□□□□ -1.64
VPS41-203ENST00000395969 PGCP20142 388 aa4.8□□□□□ -1.64
VPS41-203ENST00000395969 PAICSP22234 425 aaKnown RBP4.8□□□□□ -1.64
VPS41-203ENST00000395969 ABCD3P28288 659 aa4.8□□□□□ -1.64
VPS41-203ENST00000395969 HOXC12P31275 282 aa4.8□□□□□ -1.64
VPS41-203ENST00000395969 PPIAP62937 165 aaKnown RBP4.8□□□□□ -1.64
VPS41-203ENST00000395969 C1orf61Q13536 156 aa4.8□□□□□ -1.64
VPS41-203ENST00000395969 EXOSC7Q15024 291 aaKnown RBP4.8□□□□□ -1.64
VPS41-203ENST00000395969 TMEM31Q5JXX7 168 aa4.8□□□□□ -1.64
VPS41-203ENST00000395969 EEF1A1P5Q5VTE0 462 aa4.8□□□□□ -1.64
VPS41-203ENST00000395969 C3orf33Q6P1S2 294 aa4.8□□□□□ -1.64
VPS41-203ENST00000395969 ESPNLQ6ZVH7 1005 aa4.8□□□□□ -1.64
VPS41-203ENST00000395969 CDC20BQ86Y33 519 aa4.8□□□□□ -1.64
VPS41-203ENST00000395969 TMEM185AQ8NFB2 350 aa4.8□□□□□ -1.64
VPS41-203ENST00000395969 OR52L1Q8NGH7 329 aa4.8□□□□□ -1.64
VPS41-203ENST00000395969 ADAMTS17Q8TE56 1095 aa4.8□□□□□ -1.64
VPS41-203ENST00000395969 CPNE2Q96FN4 548 aaPredicted RBP4.8□□□□□ -1.64
VPS41-203ENST00000395969 MESP1Q9BRJ9 268 aa4.8□□□□□ -1.64
VPS41-203ENST00000395969 MFFQ9GZY8 342 aa4.8□□□□□ -1.64
VPS41-203ENST00000395969 CNIH4Q9P003 139 aa4.8□□□□□ -1.64
VPS41-203ENST00000395969 TRAV14DV4A0A0A6YYC5 116 aa4.79□□□□□ -1.64
VPS41-203ENST00000395969 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.79□□□□□ -1.64
VPS41-203ENST00000395969 COLCA2A8K830 154 aa4.79□□□□□ -1.64
VPS41-203ENST00000395969 A8MVM7 634 aa4.79□□□□□ -1.64
VPS41-203ENST00000395969 HRKO00198 91 aa4.79□□□□□ -1.64
VPS41-203ENST00000395969 OR2T1O43869 369 aa4.79□□□□□ -1.64
VPS41-203ENST00000395969 GLCEO94923 617 aa4.79□□□□□ -1.64
VPS41-203ENST00000395969 PMS2P2O95744 297 aa4.79□□□□□ -1.64
VPS41-203ENST00000395969 ISG15P05161 165 aa4.79□□□□□ -1.64
VPS41-203ENST00000395969 SBK2P0C263 348 aa4.79□□□□□ -1.64
VPS41-203ENST00000395969 COX6A1P12074 109 aa4.79□□□□□ -1.64
VPS41-203ENST00000395969 ZNF35P13682 527 aa4.79□□□□□ -1.64
VPS41-203ENST00000395969 NDUFB7P17568 137 aa4.79□□□□□ -1.64
VPS41-203ENST00000395969 MAOAP21397 527 aa4.79□□□□□ -1.64
VPS41-203ENST00000395969 STARP49675 285 aa4.79□□□□□ -1.64
VPS41-203ENST00000395969 PGDP52209 483 aa4.79□□□□□ -1.64
VPS41-203ENST00000395969 ART1P52961 327 aa4.79□□□□□ -1.64
VPS41-203ENST00000395969 NRG3P56975 720 aa4.79□□□□□ -1.64
VPS41-203ENST00000395969 GMFBP60983 142 aa4.79□□□□□ -1.64
VPS41-203ENST00000395969 HIST1H3AP68431 136 aa4.79□□□□□ -1.64
VPS41-203ENST00000395969 H3F3AP84243 136 aa4.79□□□□□ -1.64
VPS41-203ENST00000395969 ZNF117Q03924 483 aa4.79□□□□□ -1.64
VPS41-203ENST00000395969 ZNF345Q14585 488 aa4.79□□□□□ -1.64
VPS41-203ENST00000395969 RNF212Q495C1 297 aa4.79□□□□□ -1.64
VPS41-203ENST00000395969 ALG10BQ5I7T1 473 aa4.79□□□□□ -1.64
VPS41-203ENST00000395969 HIST2H3PS2Q5TEC6 136 aa4.79□□□□□ -1.64
VPS41-203ENST00000395969 DCAF12L2Q5VW00 463 aa4.79□□□□□ -1.64
VPS41-203ENST00000395969 GUSBP11Q6P575 273 aa4.79□□□□□ -1.64
VPS41-203ENST00000395969 HIST2H3AQ71DI3 136 aa4.79□□□□□ -1.64
VPS41-203ENST00000395969 SLC29A4Q7RTT9 530 aa4.79□□□□□ -1.64
VPS41-203ENST00000395969 SLC16A9Q7RTY1 509 aa4.79□□□□□ -1.64
VPS41-203ENST00000395969 REC114Q7Z4M0 266 aa4.79□□□□□ -1.64
VPS41-203ENST00000395969 CEACAM19Q7Z692 300 aa4.79□□□□□ -1.64
VPS41-203ENST00000395969 CACUL1Q86Y37 369 aa4.79□□□□□ -1.64
VPS41-203ENST00000395969 TMEFF1Q8IYR6 380 aa4.79□□□□□ -1.64
VPS41-203ENST00000395969 BBS1Q8NFJ9 593 aa4.79□□□□□ -1.64
VPS41-203ENST00000395969 OR2AK2Q8NG84 335 aa4.79□□□□□ -1.64
VPS41-203ENST00000395969 OR2Y1Q8NGV0 311 aa4.79□□□□□ -1.64
VPS41-203ENST00000395969 OR4C3Q8NH37 302 aa4.79□□□□□ -1.64
VPS41-203ENST00000395969 OR52I2Q8NH67 350 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms