RNA–Protein interactions for RNA: ENST00000395722.7

PTPN20-206, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-206ENST00000395722 ATF6BQ99941 703 aa13.2□□□□□ -0.3
PTPN20-206ENST00000395722 BCL7BQ9BQE9 202 aa13.2□□□□□ -0.3
PTPN20-206ENST00000395722 NOX3Q9HBY0 568 aa13.2□□□□□ -0.3
PTPN20-206ENST00000395722 SLC5A6Q9Y289 635 aa13.2□□□□□ -0.3
PTPN20-206ENST00000395722 ARPC4-TTLL3A0A0A6YYG9 625 aa13.2□□□□□ -0.3
PTPN20-206ENST00000395722 OR4C45A6NMZ5 311 aa13.2□□□□□ -0.3
PTPN20-206ENST00000395722 LYZL6O75951 148 aa13.2□□□□□ -0.3
PTPN20-206ENST00000395722 UBL3O95164 117 aa13.2□□□□□ -0.3
PTPN20-206ENST00000395722 HLA-HP01893 362 aa13.2□□□□□ -0.3
PTPN20-206ENST00000395722 GADD45AP24522 165 aa13.2□□□□□ -0.3
PTPN20-206ENST00000395722 MMP16P51512 607 aa13.2□□□□□ -0.3
PTPN20-206ENST00000395722 PSMA6P60900 246 aaKnown RBP13.2□□□□□ -0.3
PTPN20-206ENST00000395722 MFGE8Q08431 387 aaPredicted RBP13.2□□□□□ -0.3
PTPN20-206ENST00000395722 ALKBH1Q13686 389 aaKnown RBP13.2□□□□□ -0.3
PTPN20-206ENST00000395722 SFRP5Q5T4F7 317 aa13.2□□□□□ -0.3
PTPN20-206ENST00000395722 ZNF774Q6NX45 483 aa13.2□□□□□ -0.3
PTPN20-206ENST00000395722 CD200R1LQ6Q8B3 271 aa13.2□□□□□ -0.3
PTPN20-206ENST00000395722 ARL9Q6T311 187 aa13.2□□□□□ -0.3
PTPN20-206ENST00000395722 CXorf67Q86X51 503 aaPredicted RBP13.2□□□□□ -0.3
PTPN20-206ENST00000395722 CATSPERDQ86XM0 798 aa13.2□□□□□ -0.3
PTPN20-206ENST00000395722 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.2□□□□□ -0.3
PTPN20-206ENST00000395722 LIX1LQ8IVB5 337 aa13.2□□□□□ -0.3
PTPN20-206ENST00000395722 PRSS35Q8N3Z0 413 aa13.2□□□□□ -0.3
PTPN20-206ENST00000395722 C17orf78Q8N4C9 275 aa13.2□□□□□ -0.3
PTPN20-206ENST00000395722 RELL2Q8NC24 303 aaPredicted RBP13.2□□□□□ -0.3
PTPN20-206ENST00000395722 GALNT11Q8NCW6 608 aa13.2□□□□□ -0.3
PTPN20-206ENST00000395722 IL17RDQ8NFM7 739 aa13.2□□□□□ -0.3
PTPN20-206ENST00000395722 OR1F12Q8NHA8 337 aa13.2□□□□□ -0.3
PTPN20-206ENST00000395722 ISOC1Q96CN7 298 aa13.2□□□□□ -0.3
PTPN20-206ENST00000395722 BBC3Q96PG8 261 aaPredicted RBP13.2□□□□□ -0.3
PTPN20-206ENST00000395722 KCNJ15Q99712 375 aa13.2□□□□□ -0.3
PTPN20-206ENST00000395722 FAM206AQ9NX38 181 aa13.2□□□□□ -0.3
PTPN20-206ENST00000395722 PLEK2Q9NYT0 353 aa13.2□□□□□ -0.3
PTPN20-206ENST00000395722 FRRS1LQ9P0K9 344 aa13.2□□□□□ -0.3
PTPN20-206ENST00000395722 PNMA8CA0A1B0GUJ8 204 aa13.19□□□□□ -0.3
PTPN20-206ENST00000395722 LRRTM2O43300 516 aa13.19□□□□□ -0.3
PTPN20-206ENST00000395722 DOK2O60496 412 aa13.19□□□□□ -0.3
PTPN20-206ENST00000395722 ARR3P36575 388 aa13.19□□□□□ -0.3
PTPN20-206ENST00000395722 CRYBB2P43320 205 aa13.19□□□□□ -0.3
PTPN20-206ENST00000395722 KIR3DL2P43630 455 aa13.19□□□□□ -0.3
PTPN20-206ENST00000395722 GDI2P50395 445 aaKnown RBP13.19□□□□□ -0.3
PTPN20-206ENST00000395722 RPS25P62851 125 aaKnown RBP13.19□□□□□ -0.3
PTPN20-206ENST00000395722 CTF1Q16619 201 aa13.19□□□□□ -0.3
PTPN20-206ENST00000395722 ZNF829Q3KNS6 432 aaPredicted RBP13.19□□□□□ -0.3
PTPN20-206ENST00000395722 RAB2BQ8WUD1 216 aa13.19□□□□□ -0.3
PTPN20-206ENST00000395722 G6PC2Q9NQR9 355 aa13.19□□□□□ -0.3
PTPN20-206ENST00000395722 SLC17A5Q9NRA2 495 aa13.19□□□□□ -0.3
PTPN20-206ENST00000395722 GALNT8Q9NY28 637 aa13.19□□□□□ -0.3
PTPN20-206ENST00000395722 TRBV2A0A0J9YWF9 115 aa13.18□□□□□ -0.3
PTPN20-206ENST00000395722 DVL2O14641 736 aa13.18□□□□□ -0.3
PTPN20-206ENST00000395722 GPRIN2O60269 458 aa13.18□□□□□ -0.3
PTPN20-206ENST00000395722 GPX5O75715 221 aa13.18□□□□□ -0.3
PTPN20-206ENST00000395722 RAD51DO75771 328 aa13.18□□□□□ -0.3
PTPN20-206ENST00000395722 COX5BP10606 129 aa13.18□□□□□ -0.3
PTPN20-206ENST00000395722 PSMB1P20618 241 aaKnown RBP13.18□□□□□ -0.3
PTPN20-206ENST00000395722 BMP5P22003 454 aa13.18□□□□□ -0.3
PTPN20-206ENST00000395722 TAF13Q15543 124 aa13.18□□□□□ -0.3
PTPN20-206ENST00000395722 PABPC1L2AQ5JQF8 200 aa13.18□□□□□ -0.3
PTPN20-206ENST00000395722 WDR38Q5JTN6 314 aa13.18□□□□□ -0.3
PTPN20-206ENST00000395722 TMEM53Q6P2H8 277 aa13.18□□□□□ -0.3
PTPN20-206ENST00000395722 PRSS45Q7RTY3 260 aa13.18□□□□□ -0.3
PTPN20-206ENST00000395722 AKR7LQ8NHP1 331 aa13.18□□□□□ -0.3
PTPN20-206ENST00000395722 NANOS1Q8WY41 292 aaKnown RBP13.18□□□□□ -0.3
PTPN20-206ENST00000395722 GHSRQ92847 366 aa13.18□□□□□ -0.3
PTPN20-206ENST00000395722 RPL3LQ92901 407 aaKnown RBP13.18□□□□□ -0.3
PTPN20-206ENST00000395722 ZNF75AQ96N20 296 aa13.18□□□□□ -0.3
PTPN20-206ENST00000395722 OR51E2Q9H255 320 aa13.18□□□□□ -0.3
PTPN20-206ENST00000395722 RSL24D1Q9UHA3 163 aaKnown RBP13.18□□□□□ -0.3
PTPN20-206ENST00000395722 STUB1Q9UNE7 303 aa13.18□□□□□ -0.3
PTPN20-206ENST00000395722 NBASA2RRP1 2371 aa13.18□□□□□ -0.3
PTPN20-206ENST00000395722 CIB4A0PJX0 185 aa13.18□□□□□ -0.3
PTPN20-206ENST00000395722 TRIM64BA6NI03 449 aa13.18□□□□□ -0.3
PTPN20-206ENST00000395722 ACOD1A6NK06 481 aa13.18□□□□□ -0.3
PTPN20-206ENST00000395722 CCL21O00585 134 aa13.18□□□□□ -0.3
PTPN20-206ENST00000395722 ZFPL1O95159 310 aa13.18□□□□□ -0.3
PTPN20-206ENST00000395722 GALP22466 123 aa13.18□□□□□ -0.3
PTPN20-206ENST00000395722 PSMA1P25786 263 aaKnown RBP13.18□□□□□ -0.3
PTPN20-206ENST00000395722 SLC3A1Q07837 685 aa13.18□□□□□ -0.3
PTPN20-206ENST00000395722 TRAM1Q15629 374 aa13.18□□□□□ -0.3
PTPN20-206ENST00000395722 TIMM50Q3ZCQ8 353 aa13.18□□□□□ -0.3
PTPN20-206ENST00000395722 STAC2Q6ZMT1 411 aa13.18□□□□□ -0.3
PTPN20-206ENST00000395722 GDPGP1Q6ZNW5 385 aa13.18□□□□□ -0.3
PTPN20-206ENST00000395722 BHLHA15Q7RTS1 189 aaPredicted RBP13.18□□□□□ -0.3
PTPN20-206ENST00000395722 WDR31Q8NA23 367 aa13.18□□□□□ -0.3
PTPN20-206ENST00000395722 OBP2BQ9NPH6 170 aa13.18□□□□□ -0.3
PTPN20-206ENST00000395722 TMEM269A0A1B0GVZ9 245 aa13.17□□□□□ -0.3
PTPN20-206ENST00000395722 TRDV1A0A1B0GX56 115 aa13.17□□□□□ -0.3
PTPN20-206ENST00000395722 LOC110117498-PIK3R3F6TDL0 507 aa13.17□□□□□ -0.3
PTPN20-206ENST00000395722 H3BMQ9 156 aa13.17□□□□□ -0.3
PTPN20-206ENST00000395722 AIREO43918 545 aa13.17□□□□□ -0.3
PTPN20-206ENST00000395722 SC5DO75845 299 aa13.17□□□□□ -0.3
PTPN20-206ENST00000395722 HSD11B1P28845 292 aa13.17□□□□□ -0.3
PTPN20-206ENST00000395722 RPS11P62280 158 aaKnown RBP eCLIP13.17□□□□□ -0.3
PTPN20-206ENST00000395722 RAB1AP62820 205 aa13.17□□□□□ -0.3
PTPN20-206ENST00000395722 TSC22D1Q15714 1073 aa13.17□□□□□ -0.3
PTPN20-206ENST00000395722 MS4A15Q8N5U1 240 aa13.17□□□□□ -0.3
PTPN20-206ENST00000395722 CPEB3Q8NE35 698 aaKnown RBP13.17□□□□□ -0.3
PTPN20-206ENST00000395722 RGP1Q92546 391 aaPredicted RBP13.17□□□□□ -0.3
PTPN20-206ENST00000395722 TRMT61AQ96FX7 289 aaKnown RBP13.17□□□□□ -0.3
PTPN20-206ENST00000395722 MOB1AQ9H8S9 216 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms