RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 GPR84Q9NQS5 396 aa9.45□□□□□ -0.9
COL4A6-203ENST00000394872 OSGIN2Q9Y236 505 aa9.45□□□□□ -0.9
COL4A6-203ENST00000394872 FITM1A5D6W6 292 aa9.44□□□□□ -0.9
COL4A6-203ENST00000394872 CBR3O75828 277 aa9.44□□□□□ -0.9
COL4A6-203ENST00000394872 DFFBO76075 338 aa9.44□□□□□ -0.9
COL4A6-203ENST00000394872 IGLV3-25P01717 112 aa9.44□□□□□ -0.9
COL4A6-203ENST00000394872 CPEP16870 476 aa9.44□□□□□ -0.9
COL4A6-203ENST00000394872 CSN1S1P47710 185 aa9.44□□□□□ -0.9
COL4A6-203ENST00000394872 ETV1P50549 477 aa9.44□□□□□ -0.9
COL4A6-203ENST00000394872 ELLP55199 621 aaPredicted RBP9.44□□□□□ -0.9
COL4A6-203ENST00000394872 RPS16P62249 146 aaKnown RBP9.44□□□□□ -0.9
COL4A6-203ENST00000394872 SYT14P1Q58G82 188 aa9.44□□□□□ -0.9
COL4A6-203ENST00000394872 ACER3Q9NUN7 267 aa9.44□□□□□ -0.9
COL4A6-203ENST00000394872 SLC23A1Q9UHI7 598 aa9.44□□□□□ -0.9
COL4A6-203ENST00000394872 CACNA1SQ13698 1873 aa9.44□□□□□ -0.9
COL4A6-203ENST00000394872 SDK1Q7Z5N4 2213 aa9.44□□□□□ -0.9
COL4A6-203ENST00000394872 HLA-HP01893 362 aa9.44□□□□□ -0.9
COL4A6-203ENST00000394872 BSGP35613 385 aa9.44□□□□□ -0.9
COL4A6-203ENST00000394872 RGS7BPQ6MZT1 257 aaPredicted RBP9.44□□□□□ -0.9
COL4A6-203ENST00000394872 THNSL2Q86YJ6 484 aa9.44□□□□□ -0.9
COL4A6-203ENST00000394872 OR2V1Q8NHB1 315 aa9.44□□□□□ -0.9
COL4A6-203ENST00000394872 RNF32Q9H0A6 362 aa9.44□□□□□ -0.9
COL4A6-203ENST00000394872 SPTY2D1-AS1A0A0U1RR47 76 aa9.44□□□□□ -0.9
COL4A6-203ENST00000394872 TRABD2BA6NFA1 517 aa9.44□□□□□ -0.9
COL4A6-203ENST00000394872 ACOT8O14734 319 aa9.44□□□□□ -0.9
COL4A6-203ENST00000394872 SRP9P49458 86 aaKnown RBP9.44□□□□□ -0.9
COL4A6-203ENST00000394872 OR1C1Q15619 314 aa9.44□□□□□ -0.9
COL4A6-203ENST00000394872 LSRQ86X29 649 aaPredicted RBP9.44□□□□□ -0.9
COL4A6-203ENST00000394872 TMEM104Q8NE00 496 aa9.44□□□□□ -0.9
COL4A6-203ENST00000394872 RDH5Q92781 318 aa9.44□□□□□ -0.9
COL4A6-203ENST00000394872 CORO2AQ92828 525 aa9.44□□□□□ -0.9
COL4A6-203ENST00000394872 MBOAT4Q96T53 435 aa9.44□□□□□ -0.9
COL4A6-203ENST00000394872 SLC25A21Q9BQT8 299 aaPredicted RBP9.44□□□□□ -0.9
COL4A6-203ENST00000394872 SARGQ9BW04 601 aa9.44□□□□□ -0.9
COL4A6-203ENST00000394872 NPAP1Q9NZP6 1156 aa9.44□□□□□ -0.9
COL4A6-203ENST00000394872 SLC17A4Q9Y2C5 497 aa9.44□□□□□ -0.9
COL4A6-203ENST00000394872 C20orf202A1L168 122 aa9.44□□□□□ -0.9
COL4A6-203ENST00000394872 PRSS37A4D1T9 235 aa9.44□□□□□ -0.9
COL4A6-203ENST00000394872 FABP7O15540 132 aa9.44□□□□□ -0.9
COL4A6-203ENST00000394872 FABP6P51161 128 aa9.44□□□□□ -0.9
COL4A6-203ENST00000394872 TLE1Q04724 770 aa9.44□□□□□ -0.9
COL4A6-203ENST00000394872 HSD17B11Q8NBQ5 300 aa9.44□□□□□ -0.9
COL4A6-203ENST00000394872 OR51S1Q8NGJ8 323 aa9.44□□□□□ -0.9
COL4A6-203ENST00000394872 OR13F1Q8NGS4 319 aa9.44□□□□□ -0.9
COL4A6-203ENST00000394872 UBE2FQ969M7 185 aa9.44□□□□□ -0.9
COL4A6-203ENST00000394872 OR2A14Q96R47 310 aa9.44□□□□□ -0.9
COL4A6-203ENST00000394872 TCEAL7Q9BRU2 100 aa9.44□□□□□ -0.9
COL4A6-203ENST00000394872 ADAM19Q9H013 955 aa9.44□□□□□ -0.9
COL4A6-203ENST00000394872 PATZ1Q9HBE1 687 aaKnown RBP9.44□□□□□ -0.9
COL4A6-203ENST00000394872 BHLHE40O14503 412 aa9.44□□□□□ -0.9
COL4A6-203ENST00000394872 HPNP05981 417 aa9.44□□□□□ -0.9
COL4A6-203ENST00000394872 DUSP1P28562 367 aa9.44□□□□□ -0.9
COL4A6-203ENST00000394872 DSCR4P56555 118 aaPredicted RBP9.44□□□□□ -0.9
COL4A6-203ENST00000394872 FLI1Q01543 452 aaPredicted RBP9.44□□□□□ -0.9
COL4A6-203ENST00000394872 DOC2BQ14184 412 aa9.44□□□□□ -0.9
COL4A6-203ENST00000394872 MPPED2Q15777 294 aa9.44□□□□□ -0.9
COL4A6-203ENST00000394872 OTUD1Q5VV17 481 aaPredicted RBP9.44□□□□□ -0.9
COL4A6-203ENST00000394872 ZNF620Q6ZNG0 422 aa9.44□□□□□ -0.9
COL4A6-203ENST00000394872 CCDC71Q8IV32 467 aaPredicted RBP9.44□□□□□ -0.9
COL4A6-203ENST00000394872 FBXL6Q8N531 539 aa9.44□□□□□ -0.9
COL4A6-203ENST00000394872 ATF6BQ99941 703 aa9.44□□□□□ -0.9
COL4A6-203ENST00000394872 C11orf54Q9H0W9 315 aaPredicted RBP9.44□□□□□ -0.9
COL4A6-203ENST00000394872 CMC2Q9NRP2 79 aa9.44□□□□□ -0.9
COL4A6-203ENST00000394872 LILRA5A6NI73 299 aa9.43□□□□□ -0.9
COL4A6-203ENST00000394872 RFX2P48378 723 aa9.43□□□□□ -0.9
COL4A6-203ENST00000394872 DEFA6Q01524 100 aa9.43□□□□□ -0.9
COL4A6-203ENST00000394872 SNTB1Q13884 538 aaKnown RBP9.43□□□□□ -0.9
COL4A6-203ENST00000394872 FZD2Q14332 565 aa9.43□□□□□ -0.9
COL4A6-203ENST00000394872 SHBQ15464 509 aa9.43□□□□□ -0.9
COL4A6-203ENST00000394872 SOWAHCQ53LP3 525 aaPredicted RBP9.43□□□□□ -0.9
COL4A6-203ENST00000394872 TMEM200AQ86VY9 491 aa9.43□□□□□ -0.9
COL4A6-203ENST00000394872 LINC00615Q96LM1 132 aaPredicted RBP9.43□□□□□ -0.9
COL4A6-203ENST00000394872 S1PR3Q99500 378 aa9.43□□□□□ -0.9
COL4A6-203ENST00000394872 ZNF2Q9BSG1 426 aaPredicted RBP9.43□□□□□ -0.9
COL4A6-203ENST00000394872 B3GALT5Q9Y2C3 310 aa9.43□□□□□ -0.9
COL4A6-203ENST00000394872 TAF1P21675 1872 aa9.43□□□□□ -0.9
COL4A6-203ENST00000394872 OR2A25A4D2G3 310 aa9.43□□□□□ -0.9
COL4A6-203ENST00000394872 TMEM200CA6NKL6 621 aa9.43□□□□□ -0.9
COL4A6-203ENST00000394872 ZFP92A6NM28 416 aa9.43□□□□□ -0.9
COL4A6-203ENST00000394872 UPK1AO00322 258 aa9.43□□□□□ -0.9
COL4A6-203ENST00000394872 IGFBP1P08833 259 aaPredicted RBP9.43□□□□□ -0.9
COL4A6-203ENST00000394872 B4GALT1P15291 398 aa9.43□□□□□ -0.9
COL4A6-203ENST00000394872 MPLP40238 635 aa9.43□□□□□ -0.9
COL4A6-203ENST00000394872 DHRS13Q6UX07 377 aa9.43□□□□□ -0.9
COL4A6-203ENST00000394872 PXT1Q8NFP0 134 aa9.43□□□□□ -0.9
COL4A6-203ENST00000394872 OR11G2Q8NGC1 345 aa9.43□□□□□ -0.9
COL4A6-203ENST00000394872 SEC22CQ9BRL7 303 aa9.43□□□□□ -0.9
COL4A6-203ENST00000394872 PLA2G3Q9NZ20 509 aa9.43□□□□□ -0.9
COL4A6-203ENST00000394872 A0A1B0GVG6 124 aa9.43□□□□□ -0.9
COL4A6-203ENST00000394872 FOXF1Q12946 379 aa9.43□□□□□ -0.9
COL4A6-203ENST00000394872 ADIRFQ15847 76 aa9.43□□□□□ -0.9
COL4A6-203ENST00000394872 ZNF766Q5HY98 468 aa9.43□□□□□ -0.9
COL4A6-203ENST00000394872 GUSBP11Q6P575 273 aa9.43□□□□□ -0.9
COL4A6-203ENST00000394872 FBXL14Q8N1E6 418 aa9.43□□□□□ -0.9
COL4A6-203ENST00000394872 MZB1Q8WU39 189 aa9.43□□□□□ -0.9
COL4A6-203ENST00000394872 TRGV5A0A0B4J1U4 118 aa9.43□□□□□ -0.9
COL4A6-203ENST00000394872 ZNF816-ZNF321PA0A0X1KG74 233 aa9.43□□□□□ -0.9
COL4A6-203ENST00000394872 EGR3Q06889 387 aa9.43□□□□□ -0.9
COL4A6-203ENST00000394872 ZNF321PQ8N8H1 164 aa9.43□□□□□ -0.9
COL4A6-203ENST00000394872 OR52H1Q8NGJ2 320 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms