RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 A0A1B0GTQ1 180 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 YIF1AO95070 293 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 SCAF4O95104 1147 aaKnown RBP5.16□□□□□ -1.58
RFFL-202ENST00000394597 MMP11P24347 488 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 GRPRP30550 384 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 RBMXP38159 391 aaKnown RBP5.16□□□□□ -1.58
RFFL-202ENST00000394597 NPBWR1P48145 328 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 SPCS3P61009 180 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 MELKQ14680 651 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 PGGHGQ32M88 737 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 PLEKHN1Q494U1 663 aaPredicted RBP5.16□□□□□ -1.58
RFFL-202ENST00000394597 OR2T2Q6IF00 324 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 OR2A2Q6IF42 318 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 LCN10Q6JVE6 187 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 TCTN3Q6NUS6 607 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 STEAP1BQ6NZ63 245 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 SLC22A25Q6T423 547 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 MORN4Q8NDC4 146 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 OR1J1Q8NGS3 322 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 OR4K13Q8NH42 304 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 SLC2A12Q8TD20 617 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 THEM6Q8WUY1 208 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 DDIT4LQ96D03 193 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 RAB39BQ96DA2 213 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 DNAJA3Q96EY1 480 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 OR5B12Q96R08 314 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 SARGQ9BW04 601 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 JAM3Q9BX67 310 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 OR52D1Q9H346 318 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 MED20Q9H944 212 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 LUZP4Q9P127 313 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 OPN4Q9UHM6 478 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 GOLT1BQ9Y3E0 138 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 CCDC88CQ9P219 2028 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 RP1P56715 2156 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 A0A1W2PPH5 198 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 IDSB3KWA1 339 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 BHLHE40O14503 412 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 SEMA7AO75326 666 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 PPP1R3DO95685 299 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 IL5P05113 134 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 GYPBP06028 91 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 FOLR1P15328 257 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 ZNF16P17020 682 aaPredicted RBP5.16□□□□□ -1.58
RFFL-202ENST00000394597 MPLP40238 635 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 ZNF84P51523 738 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 TAS2R19P59542 299 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 LTBQ06643 244 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 ABHD17BQ5VST6 288 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 ZNF660Q6AZW8 331 aaPredicted RBP5.16□□□□□ -1.58
RFFL-202ENST00000394597 SSX7Q7RTT5 188 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 PRICKLE2Q7Z3G6 844 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 MISPQ8IVT2 679 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 SFTPA2Q8IWL1 248 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 CMTM4Q8IZR5 234 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 OR2L13Q8N349 312 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 OR1L3Q8NH93 324 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 C16orf52Q8NHV5 167 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 NUBPLQ8TB37 319 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 PPP1R1CQ8WVI7 109 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 DNASE2BQ8WZ79 361 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 TSLPQ969D9 159 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 PNPLA2Q96AD5 504 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 ZMYND19Q96E35 227 aaPredicted RBP5.16□□□□□ -1.58
RFFL-202ENST00000394597 OR14A2Q96R54 314 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 UBQLN3Q9H347 655 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 SEC61A2Q9H9S3 476 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 APMAPQ9HDC9 416 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 KCNK7Q9Y2U2 307 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 ZNF337Q9Y3M9 751 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 IER3IP1Q9Y5U9 82 aa5.16□□□□□ -1.58
RFFL-202ENST00000394597 COL4A6Q14031 1691 aa5.15□□□□□ -1.58
RFFL-202ENST00000394597 A0A1B0GWA3 101 aa5.15□□□□□ -1.58
RFFL-202ENST00000394597 TOX3O15405 576 aaPredicted RBP5.15□□□□□ -1.58
RFFL-202ENST00000394597 F10P00742 488 aa5.15□□□□□ -1.58
RFFL-202ENST00000394597 ARG1P05089 322 aa5.15□□□□□ -1.58
RFFL-202ENST00000394597 RPA2P15927 270 aa5.15□□□□□ -1.58
RFFL-202ENST00000394597 ZFP36L2P47974 494 aaKnown RBP5.15□□□□□ -1.58
RFFL-202ENST00000394597 TRA2AQ13595 282 aaKnown RBP eCLIP5.15□□□□□ -1.58
RFFL-202ENST00000394597 ALG10Q5BKT4 473 aa5.15□□□□□ -1.58
RFFL-202ENST00000394597 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.15□□□□□ -1.58
RFFL-202ENST00000394597 IL34Q6ZMJ4 242 aa5.15□□□□□ -1.58
RFFL-202ENST00000394597 MEPCEQ7L2J0 689 aaKnown RBP5.15□□□□□ -1.58
RFFL-202ENST00000394597 C10orf111Q8N326 155 aa5.15□□□□□ -1.58
RFFL-202ENST00000394597 BCORP1Q8N888 145 aa5.15□□□□□ -1.58
RFFL-202ENST00000394597 OR13C9Q8NGT0 318 aa5.15□□□□□ -1.58
RFFL-202ENST00000394597 OR6N1Q8NGY5 312 aa5.15□□□□□ -1.58
RFFL-202ENST00000394597 CLCC1Q96S66 551 aa5.15□□□□□ -1.58
RFFL-202ENST00000394597 ORAI3Q9BRQ5 295 aa5.15□□□□□ -1.58
RFFL-202ENST00000394597 SEC11CQ9BY50 192 aa5.15□□□□□ -1.58
RFFL-202ENST00000394597 POFUT1Q9H488 388 aa5.15□□□□□ -1.58
RFFL-202ENST00000394597 CA10Q9NS85 328 aa5.15□□□□□ -1.58
RFFL-202ENST00000394597 SIRT3Q9NTG7 399 aaPredicted RBP5.15□□□□□ -1.58
RFFL-202ENST00000394597 FAM212BQ9NTI7 297 aaPredicted RBP5.15□□□□□ -1.58
RFFL-202ENST00000394597 SEMA4GQ9NTN9 838 aa5.15□□□□□ -1.58
RFFL-202ENST00000394597 ALKBH4Q9NXW9 302 aa5.15□□□□□ -1.58
RFFL-202ENST00000394597 RASL12Q9NYN1 266 aa5.15□□□□□ -1.58
RFFL-202ENST00000394597 IL17BQ9UHF5 180 aa5.15□□□□□ -1.58
RFFL-202ENST00000394597 LAMP5Q9UJQ1 280 aa5.15□□□□□ -1.58
RFFL-202ENST00000394597 TINAGQ9UJW2 476 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms