RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 NKX6-2Q9C056 277 aaPredicted RBP14.53□□□□□ -0.08
PCDH1-203ENST00000394536 CRISPLD2Q9H0B8 497 aa14.53□□□□□ -0.08
PCDH1-203ENST00000394536 C1orf198Q9H425 327 aa14.53□□□□□ -0.08
PCDH1-203ENST00000394536 HEXA-AS1Q9H8Q6 139 aa14.53□□□□□ -0.08
PCDH1-203ENST00000394536 CA14Q9ULX7 337 aa14.53□□□□□ -0.08
PCDH1-203ENST00000394536 A6NIZ1 184 aa14.52□□□□□ -0.08
PCDH1-203ENST00000394536 ZNF850A8MQ14 1090 aa14.52□□□□□ -0.08
PCDH1-203ENST00000394536 SERPINA5P05154 406 aa14.52□□□□□ -0.08
PCDH1-203ENST00000394536 GABRR1P24046 479 aa14.52□□□□□ -0.08
PCDH1-203ENST00000394536 MNX1P50219 401 aaPredicted RBP14.52□□□□□ -0.08
PCDH1-203ENST00000394536 RAP1BP61224 184 aa14.52□□□□□ -0.08
PCDH1-203ENST00000394536 RAP1AP62834 184 aa14.52□□□□□ -0.08
PCDH1-203ENST00000394536 PPP1R1AQ13522 171 aa14.52□□□□□ -0.08
PCDH1-203ENST00000394536 EBPQ15125 230 aaKnown RBP14.52□□□□□ -0.08
PCDH1-203ENST00000394536 H3F3CQ6NXT2 135 aa14.52□□□□□ -0.08
PCDH1-203ENST00000394536 SVBPQ8N300 66 aa14.52□□□□□ -0.08
PCDH1-203ENST00000394536 MRPS28Q9Y2Q9 187 aaKnown RBP14.52□□□□□ -0.08
PCDH1-203ENST00000394536 HS3ST3A1Q9Y663 406 aa14.52□□□□□ -0.08
PCDH1-203ENST00000394536 RNF215Q9Y6U7 377 aa14.52□□□□□ -0.08
PCDH1-203ENST00000394536 A0A0A6YYH2 397 aa14.52□□□□□ -0.09
PCDH1-203ENST00000394536 LOC105371267A0A1B0GV96 52 aa14.52□□□□□ -0.09
PCDH1-203ENST00000394536 A6NJ64 397 aa14.52□□□□□ -0.09
PCDH1-203ENST00000394536 SLC33A1O00400 549 aaPredicted RBP14.52□□□□□ -0.09
PCDH1-203ENST00000394536 FOXS1O43638 330 aa14.52□□□□□ -0.09
PCDH1-203ENST00000394536 MGMTP16455 207 aa14.52□□□□□ -0.09
PCDH1-203ENST00000394536 SNU13P55769 128 aaKnown RBP14.52□□□□□ -0.09
PCDH1-203ENST00000394536 MFGE8Q08431 387 aaPredicted RBP14.52□□□□□ -0.09
PCDH1-203ENST00000394536 ACOT7LQ6ZUV0 252 aa14.52□□□□□ -0.09
PCDH1-203ENST00000394536 CDC20BQ86Y33 519 aa14.52□□□□□ -0.09
PCDH1-203ENST00000394536 C2CD4CQ8TF44 421 aa14.52□□□□□ -0.09
PCDH1-203ENST00000394536 ZNF578Q96N58 590 aaPredicted RBP14.52□□□□□ -0.09
PCDH1-203ENST00000394536 TMEM59Q9BXS4 323 aa14.52□□□□□ -0.09
PCDH1-203ENST00000394536 EIF5A2Q9GZV4 153 aaKnown RBP14.52□□□□□ -0.09
PCDH1-203ENST00000394536 TXNIPQ9H3M7 391 aa14.52□□□□□ -0.09
PCDH1-203ENST00000394536 GAREM1Q9H706 876 aa14.52□□□□□ -0.09
PCDH1-203ENST00000394536 FGF21Q9NSA1 209 aa14.52□□□□□ -0.09
PCDH1-203ENST00000394536 PRR13Q9NZ81 148 aa14.52□□□□□ -0.09
PCDH1-203ENST00000394536 RAB22AQ9UL26 194 aa14.52□□□□□ -0.09
PCDH1-203ENST00000394536 RPS10-NUDT3A0A1W2PQS6 291 aa14.52□□□□□ -0.09
PCDH1-203ENST00000394536 IL33O95760 270 aa14.52□□□□□ -0.09
PCDH1-203ENST00000394536 PNPP00491 289 aa14.52□□□□□ -0.09
PCDH1-203ENST00000394536 CYCSP99999 105 aaKnown RBP14.52□□□□□ -0.09
PCDH1-203ENST00000394536 PLXDC1Q8IUK5 500 aa14.52□□□□□ -0.09
PCDH1-203ENST00000394536 STPG2Q8N412 459 aa14.52□□□□□ -0.09
PCDH1-203ENST00000394536 SLC22A24Q8N4F4 322 aa14.52□□□□□ -0.09
PCDH1-203ENST00000394536 ZC3H10Q96K80 434 aaKnown RBP14.52□□□□□ -0.09
PCDH1-203ENST00000394536 DEFB126Q9BYW3 111 aa14.52□□□□□ -0.09
PCDH1-203ENST00000394536 LAT2Q9GZY6 243 aa14.52□□□□□ -0.09
PCDH1-203ENST00000394536 SLCO5A1Q9H2Y9 848 aa14.52□□□□□ -0.09
PCDH1-203ENST00000394536 ABCA7Q8IZY2 2146 aa14.51□□□□□ -0.09
PCDH1-203ENST00000394536 DUX1O43812 170 aa14.51□□□□□ -0.09
PCDH1-203ENST00000394536 NAT2P11245 290 aa14.51□□□□□ -0.09
PCDH1-203ENST00000394536 FCARP24071 287 aa14.51□□□□□ -0.09
PCDH1-203ENST00000394536 PRAMEF20Q5VT98 475 aa14.51□□□□□ -0.09
PCDH1-203ENST00000394536 GRINAQ7Z429 371 aa14.51□□□□□ -0.09
PCDH1-203ENST00000394536 DDIT4LQ96D03 193 aa14.51□□□□□ -0.09
PCDH1-203ENST00000394536 NAGAP17050 411 aa14.51□□□□□ -0.09
PCDH1-203ENST00000394536 KRBOX4Q5JUW0 171 aa14.51□□□□□ -0.09
PCDH1-203ENST00000394536 BVESQ8NE79 360 aa14.51□□□□□ -0.09
PCDH1-203ENST00000394536 OR5M9Q8NGP3 310 aa14.51□□□□□ -0.09
PCDH1-203ENST00000394536 CTHRC1Q96CG8 243 aa14.51□□□□□ -0.09
PCDH1-203ENST00000394536 SEH1LQ96EE3 360 aa14.51□□□□□ -0.09
PCDH1-203ENST00000394536 COL4A6Q14031 1691 aa14.51□□□□□ -0.09
PCDH1-203ENST00000394536 A0A1W2PNR3 127 aa14.51□□□□□ -0.09
PCDH1-203ENST00000394536 LYPD3O95274 346 aa14.51□□□□□ -0.09
PCDH1-203ENST00000394536 KIR3DL2P43630 455 aa14.51□□□□□ -0.09
PCDH1-203ENST00000394536 ELAVL1Q15717 326 aaKnown RBP14.51□□□□□ -0.09
PCDH1-203ENST00000394536 CACNA1EQ15878 2313 aa14.51□□□□□ -0.09
PCDH1-203ENST00000394536 UNQ9370/PRO34162Q6UXP9 181 aa14.51□□□□□ -0.09
PCDH1-203ENST00000394536 HEATR5AQ86XA9 2040 aa14.51□□□□□ -0.09
PCDH1-203ENST00000394536 PRSS35Q8N3Z0 413 aa14.51□□□□□ -0.09
PCDH1-203ENST00000394536 BPIFCQ8NFQ6 507 aa14.51□□□□□ -0.09
PCDH1-203ENST00000394536 LRRC61Q9BV99 259 aa14.51□□□□□ -0.09
PCDH1-203ENST00000394536 NPDC1Q9NQX5 325 aaPredicted RBP14.51□□□□□ -0.09
PCDH1-203ENST00000394536 ASH2LQ9UBL3 628 aa14.51□□□□□ -0.09
PCDH1-203ENST00000394536 PCDHB10Q9UN67 800 aa14.51□□□□□ -0.09
PCDH1-203ENST00000394536 TLCD2A6NGC4 264 aa14.5□□□□□ -0.09
PCDH1-203ENST00000394536 HMSDA8MTL9 139 aa14.5□□□□□ -0.09
PCDH1-203ENST00000394536 BLVRBP30043 206 aaPredicted RBP14.5□□□□□ -0.09
PCDH1-203ENST00000394536 CAPZBP47756 277 aa14.5□□□□□ -0.09
PCDH1-203ENST00000394536 DHPSP49366 369 aaPredicted RBP14.5□□□□□ -0.09
PCDH1-203ENST00000394536 FZD2Q14332 565 aa14.5□□□□□ -0.09
PCDH1-203ENST00000394536 SGCBQ16585 318 aa14.5□□□□□ -0.09
PCDH1-203ENST00000394536 TMEM176BQ3YBM2 270 aaPredicted RBP14.5□□□□□ -0.09
PCDH1-203ENST00000394536 C11orf87Q6NUJ2 197 aa14.5□□□□□ -0.09
PCDH1-203ENST00000394536 TMEM71Q6P5X7 295 aa14.5□□□□□ -0.09
PCDH1-203ENST00000394536 LANCL3Q6ZV70 420 aa14.5□□□□□ -0.09
PCDH1-203ENST00000394536 OR2W3Q7Z3T1 314 aa14.5□□□□□ -0.09
PCDH1-203ENST00000394536 LRRC18Q8N456 261 aa14.5□□□□□ -0.09
PCDH1-203ENST00000394536 RNF128Q8TEB7 428 aa14.5□□□□□ -0.09
PCDH1-203ENST00000394536 ZNF700Q9H0M5 742 aa14.5□□□□□ -0.09
PCDH1-203ENST00000394536 PIPOXQ9P0Z9 390 aa14.5□□□□□ -0.09
PCDH1-203ENST00000394536 HELZP42694 1942 aaKnown RBP14.5□□□□□ -0.09
PCDH1-203ENST00000394536 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.5□□□□□ -0.09
PCDH1-203ENST00000394536 MED6O75586 246 aa14.5□□□□□ -0.09
PCDH1-203ENST00000394536 MT-ATP6P00846 226 aa14.5□□□□□ -0.09
PCDH1-203ENST00000394536 HLA-DOBP13765 273 aa14.5□□□□□ -0.09
PCDH1-203ENST00000394536 CCNOP22674 350 aa14.5□□□□□ -0.09
PCDH1-203ENST00000394536 PSMB6P28072 239 aa14.5□□□□□ -0.09
PCDH1-203ENST00000394536 CD96P40200 585 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms