RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 GABREP78334 506 aa6.4□□□□□ -1.38
SMAD1-202ENST00000394092 ZFP36L1Q07352 338 aaKnown RBP6.4□□□□□ -1.38
SMAD1-202ENST00000394092 SPOCK1Q08629 439 aa6.4□□□□□ -1.38
SMAD1-202ENST00000394092 EIF3IQ13347 325 aaKnown RBP6.4□□□□□ -1.38
SMAD1-202ENST00000394092 ZMYND11Q15326 602 aa6.4□□□□□ -1.38
SMAD1-202ENST00000394092 KCNMB1Q16558 191 aa6.4□□□□□ -1.38
SMAD1-202ENST00000394092 Q5BKY6 102 aa6.4□□□□□ -1.38
SMAD1-202ENST00000394092 TMEM255AQ5JRV8 349 aa6.4□□□□□ -1.38
SMAD1-202ENST00000394092 STPG1Q5TH74 334 aa6.4□□□□□ -1.38
SMAD1-202ENST00000394092 OTPQ5XKR4 325 aa6.4□□□□□ -1.38
SMAD1-202ENST00000394092 LAMTOR1Q6IAA8 161 aa6.4□□□□□ -1.38
SMAD1-202ENST00000394092 ASPHD2Q6ICH7 369 aa6.4□□□□□ -1.38
SMAD1-202ENST00000394092 LCN10Q6JVE6 187 aa6.4□□□□□ -1.38
SMAD1-202ENST00000394092 STEAP1BQ6NZ63 245 aa6.4□□□□□ -1.38
SMAD1-202ENST00000394092 PGAP1Q75T13 922 aa6.4□□□□□ -1.38
SMAD1-202ENST00000394092 ZNF627Q7L945 461 aa6.4□□□□□ -1.38
SMAD1-202ENST00000394092 GPAT4Q86UL3 456 aa6.4□□□□□ -1.38
SMAD1-202ENST00000394092 SLC22A24Q8N4F4 322 aa6.4□□□□□ -1.38
SMAD1-202ENST00000394092 BMPERQ8N8U9 685 aa6.4□□□□□ -1.38
SMAD1-202ENST00000394092 TMEM229BQ8NBD8 167 aa6.4□□□□□ -1.38
SMAD1-202ENST00000394092 BEST4Q8NFU0 473 aa6.4□□□□□ -1.38
SMAD1-202ENST00000394092 OR5D14Q8NGL3 314 aa6.4□□□□□ -1.38
SMAD1-202ENST00000394092 OR2Y1Q8NGV0 311 aa6.4□□□□□ -1.38
SMAD1-202ENST00000394092 OR2T35Q8NGX2 323 aa6.4□□□□□ -1.38
SMAD1-202ENST00000394092 MAFAQ8NHW3 353 aaPredicted RBP6.4□□□□□ -1.38
SMAD1-202ENST00000394092 RELTQ969Z4 430 aa6.4□□□□□ -1.38
SMAD1-202ENST00000394092 PNPLA2Q96AD5 504 aa6.4□□□□□ -1.38
SMAD1-202ENST00000394092 ZC3H10Q96K80 434 aaKnown RBP6.4□□□□□ -1.38
SMAD1-202ENST00000394092 NUDT16L1Q9BRJ7 211 aaKnown RBP6.4□□□□□ -1.38
SMAD1-202ENST00000394092 MESP1Q9BRJ9 268 aa6.4□□□□□ -1.38
SMAD1-202ENST00000394092 GINS4Q9BRT9 223 aa6.4□□□□□ -1.38
SMAD1-202ENST00000394092 NAA11Q9BSU3 229 aaPredicted RBP6.4□□□□□ -1.38
SMAD1-202ENST00000394092 EMC6Q9BV81 110 aa6.4□□□□□ -1.38
SMAD1-202ENST00000394092 ANGPTL4Q9BY76 406 aa6.4□□□□□ -1.38
SMAD1-202ENST00000394092 PBOV1Q9GZY1 135 aa6.4□□□□□ -1.38
SMAD1-202ENST00000394092 METTL17Q9H7H0 456 aaPredicted RBP6.4□□□□□ -1.38
SMAD1-202ENST00000394092 SEC61A2Q9H9S3 476 aa6.4□□□□□ -1.38
SMAD1-202ENST00000394092 TMEM138Q9NPI0 162 aa6.4□□□□□ -1.38
SMAD1-202ENST00000394092 FSCN3Q9NQT6 498 aa6.4□□□□□ -1.38
SMAD1-202ENST00000394092 NPDC1Q9NQX5 325 aaPredicted RBP6.4□□□□□ -1.38
SMAD1-202ENST00000394092 MGAT4CQ9UBM8 478 aa6.4□□□□□ -1.38
SMAD1-202ENST00000394092 GDF2Q9UK05 429 aaPredicted RBP6.4□□□□□ -1.38
SMAD1-202ENST00000394092 DKKL1Q9UK85 242 aa6.4□□□□□ -1.38
SMAD1-202ENST00000394092 FBXL2Q9UKC9 423 aa6.4□□□□□ -1.38
SMAD1-202ENST00000394092 RAB22AQ9UL26 194 aa6.4□□□□□ -1.38
SMAD1-202ENST00000394092 FLVCR2Q9UPI3 526 aa6.4□□□□□ -1.38
SMAD1-202ENST00000394092 NSG1A0A0A6YYJ2 146 aa6.39□□□□□ -1.39
SMAD1-202ENST00000394092 A0A1W2PNR3 127 aa6.39□□□□□ -1.39
SMAD1-202ENST00000394092 DCDC2BA2VCK2 349 aa6.39□□□□□ -1.39
SMAD1-202ENST00000394092 ANKRD34BA5PLL1 514 aa6.39□□□□□ -1.39
SMAD1-202ENST00000394092 LDLRAD4O15165 306 aa6.39□□□□□ -1.39
SMAD1-202ENST00000394092 EFNA2O43921 213 aa6.39□□□□□ -1.39
SMAD1-202ENST00000394092 KDM4BO94953 1096 aa6.39□□□□□ -1.39
SMAD1-202ENST00000394092 BPNT1O95861 308 aa6.39□□□□□ -1.39
SMAD1-202ENST00000394092 IFNA7P01567 189 aa6.39□□□□□ -1.39
SMAD1-202ENST00000394092 TTRP02766 147 aa6.39□□□□□ -1.39
SMAD1-202ENST00000394092 HPXP02790 462 aa6.39□□□□□ -1.39
SMAD1-202ENST00000394092 MELTFP08582 738 aa6.39□□□□□ -1.39
SMAD1-202ENST00000394092 PTHLHP12272 177 aa6.39□□□□□ -1.39
SMAD1-202ENST00000394092 RAB3AP20336 220 aa6.39□□□□□ -1.39
SMAD1-202ENST00000394092 SFTPDP35247 375 aa6.39□□□□□ -1.39
SMAD1-202ENST00000394092 EIF1AXP47813 144 aaKnown RBP6.39□□□□□ -1.39
SMAD1-202ENST00000394092 GSK3AP49840 483 aa6.39□□□□□ -1.39
SMAD1-202ENST00000394092 EFNB2P52799 333 aa6.39□□□□□ -1.39
SMAD1-202ENST00000394092 ZP1P60852 638 aa6.39□□□□□ -1.39
SMAD1-202ENST00000394092 SNRPD2P62316 118 aaKnown RBP6.39□□□□□ -1.39
SMAD1-202ENST00000394092 CAMK2DQ13557 499 aa6.39□□□□□ -1.39
SMAD1-202ENST00000394092 MEF2DQ14814 521 aa6.39□□□□□ -1.39
SMAD1-202ENST00000394092 POU4F3Q15319 338 aa6.39□□□□□ -1.39
SMAD1-202ENST00000394092 TMEM176BQ3YBM2 270 aaPredicted RBP6.39□□□□□ -1.39
SMAD1-202ENST00000394092 TRIM61Q5EBN2 209 aa6.39□□□□□ -1.39
SMAD1-202ENST00000394092 ZBTB37Q5TC79 503 aa6.39□□□□□ -1.39
SMAD1-202ENST00000394092 PRAMEF20Q5VT98 475 aa6.39□□□□□ -1.39
SMAD1-202ENST00000394092 SLC23A3Q6PIS1 610 aa6.39□□□□□ -1.39
SMAD1-202ENST00000394092 SLC25A47Q6Q0C1 308 aa6.39□□□□□ -1.39
SMAD1-202ENST00000394092 CORO6Q6QEF8 472 aa6.39□□□□□ -1.39
SMAD1-202ENST00000394092 SEZ6L2Q6UXD5 910 aa6.39□□□□□ -1.39
SMAD1-202ENST00000394092 NHLRC1Q6VVB1 395 aa6.39□□□□□ -1.39
SMAD1-202ENST00000394092 TMPPEQ6ZT21 453 aa6.39□□□□□ -1.39
SMAD1-202ENST00000394092 TMEM156Q8N614 296 aa6.39□□□□□ -1.39
SMAD1-202ENST00000394092 WDSUB1Q8N9V3 476 aa6.39□□□□□ -1.39
SMAD1-202ENST00000394092 OR1M1Q8NGA1 313 aa6.39□□□□□ -1.39
SMAD1-202ENST00000394092 PAQR8Q8TEZ7 354 aa6.39□□□□□ -1.39
SMAD1-202ENST00000394092 SNAPC3Q92966 411 aa6.39□□□□□ -1.39
SMAD1-202ENST00000394092 PPP1R14AQ96A00 147 aa6.39□□□□□ -1.39
SMAD1-202ENST00000394092 FAM46BQ96A09 425 aa6.39□□□□□ -1.39
SMAD1-202ENST00000394092 IMMP1LQ96LU5 166 aa6.39□□□□□ -1.39
SMAD1-202ENST00000394092 SLC25A21Q9BQT8 299 aaPredicted RBP6.39□□□□□ -1.39
SMAD1-202ENST00000394092 TMEM185BQ9H7F4 350 aa6.39□□□□□ -1.39
SMAD1-202ENST00000394092 BEX1Q9HBH7 125 aa6.39□□□□□ -1.39
SMAD1-202ENST00000394092 HPF1Q9NWY4 346 aa6.39□□□□□ -1.39
SMAD1-202ENST00000394092 EIF3KQ9UBQ5 218 aaKnown RBP6.39□□□□□ -1.39
SMAD1-202ENST00000394092 CGGBP1Q9UFW8 167 aaPredicted RBP6.39□□□□□ -1.39
SMAD1-202ENST00000394092 HRH3Q9Y5N1 445 aa6.39□□□□□ -1.39
SMAD1-202ENST00000394092 LAMA1P25391 3075 aa6.39□□□□□ -1.39
SMAD1-202ENST00000394092 TNRC18O15417 2968 aaPredicted RBP6.39□□□□□ -1.39
SMAD1-202ENST00000394092 A6NL46 340 aa6.39□□□□□ -1.39
SMAD1-202ENST00000394092 B4E171 279 aa6.39□□□□□ -1.39
SMAD1-202ENST00000394092 DISC1C4P0D8 188 aa6.39□□□□□ -1.39
SMAD1-202ENST00000394092 NPIPA2E9PIF3 369 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms