RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 GPR4P46093 362 aa14.67□□□□□ -0.06
SNRPA1-202ENST00000394082 MTNR1AP48039 350 aa14.67□□□□□ -0.06
SNRPA1-202ENST00000394082 SRP9P49458 86 aaKnown RBP14.67□□□□□ -0.06
SNRPA1-202ENST00000394082 HIST1H3AP68431 136 aa14.67□□□□□ -0.06
SNRPA1-202ENST00000394082 IL13RA1P78552 427 aa14.67□□□□□ -0.06
SNRPA1-202ENST00000394082 KRR1Q13601 381 aaKnown RBP14.67□□□□□ -0.06
SNRPA1-202ENST00000394082 CCDC92Q53HC0 331 aaPredicted RBP14.67□□□□□ -0.06
SNRPA1-202ENST00000394082 HIST2H3PS2Q5TEC6 136 aa14.67□□□□□ -0.06
SNRPA1-202ENST00000394082 TBPL2Q6SJ96 375 aa14.67□□□□□ -0.06
SNRPA1-202ENST00000394082 HIST2H3AQ71DI3 136 aa14.67□□□□□ -0.06
SNRPA1-202ENST00000394082 CYP4Z1Q86W10 505 aa14.67□□□□□ -0.06
SNRPA1-202ENST00000394082 SLC7A13Q8TCU3 470 aa14.67□□□□□ -0.06
SNRPA1-202ENST00000394082 SLC25A28Q96A46 364 aa14.67□□□□□ -0.06
SNRPA1-202ENST00000394082 APOBEC3DQ96AK3 386 aaPredicted RBP14.67□□□□□ -0.06
SNRPA1-202ENST00000394082 DACT3Q96B18 629 aaPredicted RBP14.67□□□□□ -0.06
SNRPA1-202ENST00000394082 UPRTQ96BW1 309 aa14.67□□□□□ -0.06
SNRPA1-202ENST00000394082 ZNF48Q96MX3 618 aaPredicted RBP14.67□□□□□ -0.06
SNRPA1-202ENST00000394082 COQ7Q99807 217 aa14.67□□□□□ -0.06
SNRPA1-202ENST00000394082 HOPXQ9BPY8 73 aaPredicted RBP14.67□□□□□ -0.06
SNRPA1-202ENST00000394082 SSBP3Q9BWW4 388 aaPredicted RBP14.67□□□□□ -0.06
SNRPA1-202ENST00000394082 SYT4Q9H2B2 425 aa14.67□□□□□ -0.06
SNRPA1-202ENST00000394082 MIOXQ9UGB7 285 aa14.67□□□□□ -0.06
SNRPA1-202ENST00000394082 SLC16A7O60669 478 aa14.66□□□□□ -0.06
SNRPA1-202ENST00000394082 ZNF682O95780 498 aa14.66□□□□□ -0.06
SNRPA1-202ENST00000394082 TXNDC12O95881 172 aa14.66□□□□□ -0.06
SNRPA1-202ENST00000394082 PLATP00750 562 aa14.66□□□□□ -0.06
SNRPA1-202ENST00000394082 CD80P33681 288 aa14.66□□□□□ -0.06
SNRPA1-202ENST00000394082 LIPEQ05469 1076 aa14.66□□□□□ -0.06
SNRPA1-202ENST00000394082 BAMBIQ13145 260 aa14.66□□□□□ -0.06
SNRPA1-202ENST00000394082 CGB2Q6NT52 195 aa14.66□□□□□ -0.06
SNRPA1-202ENST00000394082 C8orf82Q6P1X6 216 aaPredicted RBP14.66□□□□□ -0.06
SNRPA1-202ENST00000394082 BTNL3Q6UXE8 466 aa14.66□□□□□ -0.06
SNRPA1-202ENST00000394082 FKBP9P1Q75LS8 142 aa14.66□□□□□ -0.06
SNRPA1-202ENST00000394082 ATG16L2Q8NAA4 619 aa14.66□□□□□ -0.06
SNRPA1-202ENST00000394082 GJC3Q8NFK1 279 aa14.66□□□□□ -0.06
SNRPA1-202ENST00000394082 OR52E2Q8NGJ4 325 aa14.66□□□□□ -0.06
SNRPA1-202ENST00000394082 RCN3Q96D15 328 aa14.66□□□□□ -0.06
SNRPA1-202ENST00000394082 PLEKHA8Q96JA3 519 aa14.66□□□□□ -0.06
SNRPA1-202ENST00000394082 MEGF10Q96KG7 1140 aa14.66□□□□□ -0.06
SNRPA1-202ENST00000394082 ZNF582Q96NG8 517 aaPredicted RBP14.66□□□□□ -0.06
SNRPA1-202ENST00000394082 SLC30A2Q9BRI3 323 aa14.66□□□□□ -0.06
SNRPA1-202ENST00000394082 MS4A7Q9GZW8 240 aaPredicted RBP14.66□□□□□ -0.06
SNRPA1-202ENST00000394082 HDHD2Q9H0R4 259 aa14.66□□□□□ -0.06
SNRPA1-202ENST00000394082 SLITRK2Q9H156 845 aa14.66□□□□□ -0.06
SNRPA1-202ENST00000394082 TMEM165Q9HC07 324 aa14.66□□□□□ -0.06
SNRPA1-202ENST00000394082 FGFR1OP2Q9NVK5 253 aa14.66□□□□□ -0.06
SNRPA1-202ENST00000394082 COA3Q9Y2R0 106 aaPredicted RBP14.66□□□□□ -0.06
SNRPA1-202ENST00000394082 ENPP4Q9Y6X5 453 aa14.66□□□□□ -0.06
SNRPA1-202ENST00000394082 IQCF6A8MYZ5 107 aa14.65□□□□□ -0.06
SNRPA1-202ENST00000394082 CRABP1P29762 137 aa14.65□□□□□ -0.06
SNRPA1-202ENST00000394082 GATA4P43694 442 aa14.65□□□□□ -0.06
SNRPA1-202ENST00000394082 ERFP50548 548 aa14.65□□□□□ -0.06
SNRPA1-202ENST00000394082 BPIFB3P59826 476 aa14.65□□□□□ -0.06
SNRPA1-202ENST00000394082 DPY19L2P2Q6ZN68 376 aa14.65□□□□□ -0.06
SNRPA1-202ENST00000394082 COLCA1Q6ZS62 124 aa14.65□□□□□ -0.06
SNRPA1-202ENST00000394082 TSEN54Q7Z6J9 526 aaKnown RBP14.65□□□□□ -0.06
SNRPA1-202ENST00000394082 C1orf87Q8N0U7 546 aa14.65□□□□□ -0.06
SNRPA1-202ENST00000394082 BCL6BQ8N143 479 aaPredicted RBP14.65□□□□□ -0.06
SNRPA1-202ENST00000394082 PARP8Q8N3A8 854 aa14.65□□□□□ -0.06
SNRPA1-202ENST00000394082 CELF2-AS1Q8N7Q2 184 aa14.65□□□□□ -0.06
SNRPA1-202ENST00000394082 RAB40AQ8WXH6 277 aa14.65□□□□□ -0.06
SNRPA1-202ENST00000394082 SLC7A6Q92536 515 aa14.65□□□□□ -0.06
SNRPA1-202ENST00000394082 ERGIC1Q969X5 290 aa14.65□□□□□ -0.06
SNRPA1-202ENST00000394082 HSH2DQ96JZ2 352 aa14.65□□□□□ -0.06
SNRPA1-202ENST00000394082 PRDM13Q9H4Q3 707 aa14.65□□□□□ -0.06
SNRPA1-202ENST00000394082 IGHV2-70DA0A0C4DH43 119 aa14.64□□□□□ -0.07
SNRPA1-202ENST00000394082 KIR2DS1A0A191URI9 304 aa14.64□□□□□ -0.07
SNRPA1-202ENST00000394082 LRRC30A6NM36 301 aa14.64□□□□□ -0.07
SNRPA1-202ENST00000394082 RER1O15258 196 aa14.64□□□□□ -0.07
SNRPA1-202ENST00000394082 H1F0P07305 194 aaKnown RBP14.64□□□□□ -0.07
SNRPA1-202ENST00000394082 RPS2P15880 293 aaKnown RBP14.64□□□□□ -0.07
SNRPA1-202ENST00000394082 SELEP16581 610 aa14.64□□□□□ -0.07
SNRPA1-202ENST00000394082 OMPP47874 163 aa14.64□□□□□ -0.07
SNRPA1-202ENST00000394082 RPS6KA3P51812 740 aa14.64□□□□□ -0.07
SNRPA1-202ENST00000394082 COX10Q12887 443 aa14.64□□□□□ -0.07
SNRPA1-202ENST00000394082 HNRNPA0Q13151 305 aaKnown RBP14.64□□□□□ -0.07
SNRPA1-202ENST00000394082 SLC9A3R2Q15599 337 aa14.64□□□□□ -0.07
SNRPA1-202ENST00000394082 KRTAP27-1Q3LI81 207 aa14.64□□□□□ -0.07
SNRPA1-202ENST00000394082 ZNF404Q494X3 552 aa14.64□□□□□ -0.07
SNRPA1-202ENST00000394082 HSP90B2PQ58FF3 399 aa14.64□□□□□ -0.07
SNRPA1-202ENST00000394082 LEG1Q6P5S2 330 aa14.64□□□□□ -0.07
SNRPA1-202ENST00000394082 DNM1P34Q6PK57 102 aa14.64□□□□□ -0.07
SNRPA1-202ENST00000394082 KLBQ86Z14 1044 aa14.64□□□□□ -0.07
SNRPA1-202ENST00000394082 NEIL1Q96FI4 390 aaPredicted RBP14.64□□□□□ -0.07
SNRPA1-202ENST00000394082 FAM46AQ96IP4 442 aaKnown RBP14.64□□□□□ -0.07
SNRPA1-202ENST00000394082 NUAK2Q9H093 628 aa14.64□□□□□ -0.07
SNRPA1-202ENST00000394082 KRCC1Q9NPI7 259 aaPredicted RBP14.64□□□□□ -0.07
SNRPA1-202ENST00000394082 NME4O00746 187 aa14.63□□□□□ -0.07
SNRPA1-202ENST00000394082 IMPA2O14732 288 aa14.63□□□□□ -0.07
SNRPA1-202ENST00000394082 GSTA4O15217 222 aa14.63□□□□□ -0.07
SNRPA1-202ENST00000394082 SERPINA1P01009 418 aa14.63□□□□□ -0.07
SNRPA1-202ENST00000394082 DBHP09172 617 aa14.63□□□□□ -0.07
SNRPA1-202ENST00000394082 RHCEP18577 417 aa14.63□□□□□ -0.07
SNRPA1-202ENST00000394082 GNB2P62879 340 aa14.63□□□□□ -0.07
SNRPA1-202ENST00000394082 HLXQ14774 488 aaPredicted RBP14.63□□□□□ -0.07
SNRPA1-202ENST00000394082 OR2T2Q6IF00 324 aa14.63□□□□□ -0.07
SNRPA1-202ENST00000394082 C1orf94Q6P1W5 598 aa14.63□□□□□ -0.07
SNRPA1-202ENST00000394082 HACD2Q6Y1H2 254 aa14.63□□□□□ -0.07
SNRPA1-202ENST00000394082 NLRC3Q7RTR2 1065 aa14.63□□□□□ -0.07
SNRPA1-202ENST00000394082 Q8TCH9 128 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms