RNA–Protein interactions for RNA: ENST00000393824.7

CUX1-204, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-204ENST00000393824 BAP18Q8IXM2 172 aa10.01□□□□□ -0.81
CUX1-204ENST00000393824 LRRC25Q8N386 305 aaPredicted RBP10.01□□□□□ -0.81
CUX1-204ENST00000393824 ARHGEF39Q8N4T4 335 aa10.01□□□□□ -0.81
CUX1-204ENST00000393824 OR51A7Q8NH64 312 aa10.01□□□□□ -0.81
CUX1-204ENST00000393824 ZNF559Q9BR84 538 aa10.01□□□□□ -0.81
CUX1-204ENST00000393824 MEPEQ9NQ76 525 aaPredicted RBP10.01□□□□□ -0.81
CUX1-204ENST00000393824 MT-ND4LP03901 98 aa10.01□□□□□ -0.81
CUX1-204ENST00000393824 CFPP27918 469 aa10.01□□□□□ -0.81
CUX1-204ENST00000393824 CD34P28906 385 aa10.01□□□□□ -0.81
CUX1-204ENST00000393824 SDHAP31040 664 aa10.01□□□□□ -0.81
CUX1-204ENST00000393824 NAA10P41227 235 aaPredicted RBP10.01□□□□□ -0.81
CUX1-204ENST00000393824 RBM34P42696 430 aaKnown RBP10.01□□□□□ -0.81
CUX1-204ENST00000393824 GPR3P46089 330 aa10.01□□□□□ -0.81
CUX1-204ENST00000393824 DIO1P49895 249 aa10.01□□□□□ -0.81
CUX1-204ENST00000393824 PPT1P50897 306 aa10.01□□□□□ -0.81
CUX1-204ENST00000393824 ACTBP60709 375 aa10.01□□□□□ -0.81
CUX1-204ENST00000393824 RPS15AP62244 130 aaKnown RBP10.01□□□□□ -0.81
CUX1-204ENST00000393824 ACTG1P63261 375 aa10.01□□□□□ -0.81
CUX1-204ENST00000393824 GUCA2AQ02747 115 aa10.01□□□□□ -0.81
CUX1-204ENST00000393824 ALKBH1Q13686 389 aaKnown RBP10.01□□□□□ -0.81
CUX1-204ENST00000393824 SSX2Q16385 188 aa10.01□□□□□ -0.81
CUX1-204ENST00000393824 MST1LQ2TV78 715 aa10.01□□□□□ -0.81
CUX1-204ENST00000393824 DEFB134Q4QY38 66 aa10.01□□□□□ -0.81
CUX1-204ENST00000393824 ZCCHC12Q6PEW1 402 aa10.01□□□□□ -0.81
CUX1-204ENST00000393824 UNQ6126/PRO20091Q6UXV3 157 aa10.01□□□□□ -0.81
CUX1-204ENST00000393824 GABRG1Q8N1C3 465 aa10.01□□□□□ -0.81
CUX1-204ENST00000393824 PAQR4Q8N4S7 273 aaPredicted RBP10.01□□□□□ -0.81
CUX1-204ENST00000393824 OR7G2Q8NG99 324 aa10.01□□□□□ -0.81
CUX1-204ENST00000393824 OR5T3Q8NGG3 340 aa10.01□□□□□ -0.81
CUX1-204ENST00000393824 IFI44Q8TCB0 444 aa10.01□□□□□ -0.81
CUX1-204ENST00000393824 GPX8Q8TED1 209 aa10.01□□□□□ -0.81
CUX1-204ENST00000393824 TCTEX1D2Q8WW35 142 aa10.01□□□□□ -0.81
CUX1-204ENST00000393824 HIST1H2BAQ96A08 127 aa10.01□□□□□ -0.81
CUX1-204ENST00000393824 SEC61A2Q9H9S3 476 aa10.01□□□□□ -0.81
CUX1-204ENST00000393824 STEAP1Q9UHE8 339 aa10.01□□□□□ -0.81
CUX1-204ENST00000393824 PCNX2A6NKB5 2137 aa10.01□□□□□ -0.81
CUX1-204ENST00000393824 KNTC1P50748 2209 aa10.01□□□□□ -0.81
CUX1-204ENST00000393824 TLCD2A6NGC4 264 aa10□□□□□ -0.81
CUX1-204ENST00000393824 DUX1O43812 170 aa10□□□□□ -0.81
CUX1-204ENST00000393824 WNT11O96014 354 aa10□□□□□ -0.81
CUX1-204ENST00000393824 AK1P00568 194 aa10□□□□□ -0.81
CUX1-204ENST00000393824 IFI6P09912 130 aa10□□□□□ -0.81
CUX1-204ENST00000393824 APEHP13798 732 aaKnown RBP10□□□□□ -0.81
CUX1-204ENST00000393824 FOLR1P15328 257 aa10□□□□□ -0.81
CUX1-204ENST00000393824 PCP4P48539 62 aa10□□□□□ -0.81
CUX1-204ENST00000393824 PRKXP51817 358 aa10□□□□□ -0.81
CUX1-204ENST00000393824 TAS2R19P59542 299 aa10□□□□□ -0.81
CUX1-204ENST00000393824 BPIFB3P59826 476 aa10□□□□□ -0.81
CUX1-204ENST00000393824 FHL1Q13642 323 aa10□□□□□ -0.81
CUX1-204ENST00000393824 LRRC37A5PQ49AS3 106 aa10□□□□□ -0.81
CUX1-204ENST00000393824 ZNF684Q5T5D7 378 aa10□□□□□ -0.81
CUX1-204ENST00000393824 ATPAF1Q5TC12 328 aaPredicted RBP10□□□□□ -0.81
CUX1-204ENST00000393824 YOD1Q5VVQ6 348 aaPredicted RBP10□□□□□ -0.81
CUX1-204ENST00000393824 TMPRSS12Q86WS5 348 aa10□□□□□ -0.81
CUX1-204ENST00000393824 TMEM229BQ8NBD8 167 aa10□□□□□ -0.81
CUX1-204ENST00000393824 OR52E2Q8NGJ4 325 aa10□□□□□ -0.81
CUX1-204ENST00000393824 SEC22AQ96IW7 307 aa10□□□□□ -0.81
CUX1-204ENST00000393824 TNFRSF13CQ96RJ3 184 aa10□□□□□ -0.81
CUX1-204ENST00000393824 TSPAN10Q9H1Z9 355 aaPredicted RBP10□□□□□ -0.81
CUX1-204ENST00000393824 TMEM231Q9H6L2 316 aa10□□□□□ -0.81
CUX1-204ENST00000393824 SOHLH2Q9NX45 425 aa10□□□□□ -0.81
CUX1-204ENST00000393824 TREM2Q9NZC2 230 aa10□□□□□ -0.81
CUX1-204ENST00000393824 ASH2LQ9UBL3 628 aa10□□□□□ -0.81
CUX1-204ENST00000393824 CHRNA9Q9UGM1 479 aa10□□□□□ -0.81
CUX1-204ENST00000393824 SCN2AQ99250 2005 aa10□□□□□ -0.81
CUX1-204ENST00000393824 TRBV5-5A0A0J9YX44 114 aa10□□□□□ -0.81
CUX1-204ENST00000393824 TEX13DA0A0J9YY54 714 aaPredicted RBP10□□□□□ -0.81
CUX1-204ENST00000393824 A0A1W2PPE3 182 aa10□□□□□ -0.81
CUX1-204ENST00000393824 ZNF705EA8MWA4 302 aaPredicted RBP10□□□□□ -0.81
CUX1-204ENST00000393824 H3BMH7 237 aa10□□□□□ -0.81
CUX1-204ENST00000393824 SLC31A2O15432 143 aa10□□□□□ -0.81
CUX1-204ENST00000393824 CD14P08571 375 aa10□□□□□ -0.81
CUX1-204ENST00000393824 LAP3P28838 519 aa10□□□□□ -0.81
CUX1-204ENST00000393824 CAV2P51636 162 aa10□□□□□ -0.81
CUX1-204ENST00000393824 BTN3A2P78410 334 aa10□□□□□ -0.81
CUX1-204ENST00000393824 DUSP5Q16690 384 aa10□□□□□ -0.81
CUX1-204ENST00000393824 C9orf152Q5JTZ5 239 aa10□□□□□ -0.81
CUX1-204ENST00000393824 SLC35D3Q5M8T2 416 aa10□□□□□ -0.81
CUX1-204ENST00000393824 FAM111BQ6SJ93 734 aa10□□□□□ -0.81
CUX1-204ENST00000393824 TMEM205Q6UW68 189 aa10□□□□□ -0.81
CUX1-204ENST00000393824 TMED4Q7Z7H5 227 aa10□□□□□ -0.81
CUX1-204ENST00000393824 ZNF227Q86WZ6 799 aa10□□□□□ -0.81
CUX1-204ENST00000393824 METTL27Q8N6F8 245 aaPredicted RBP10□□□□□ -0.81
CUX1-204ENST00000393824 CSNK1A1LQ8N752 337 aa10□□□□□ -0.81
CUX1-204ENST00000393824 OR1J2Q8NGS2 313 aa10□□□□□ -0.81
CUX1-204ENST00000393824 DVL3Q92997 716 aaPredicted RBP10□□□□□ -0.81
CUX1-204ENST00000393824 GAL3ST3Q96A11 431 aa10□□□□□ -0.81
CUX1-204ENST00000393824 ZBTB8AQ96BR9 441 aa10□□□□□ -0.81
CUX1-204ENST00000393824 RBM18Q96H35 190 aaKnown RBP10□□□□□ -0.81
CUX1-204ENST00000393824 TMPRSS5Q9H3S3 457 aa10□□□□□ -0.81
CUX1-204ENST00000393824 TUBA4BQ9H853 241 aa10□□□□□ -0.81
CUX1-204ENST00000393824 DUSP22Q9NRW4 184 aa10□□□□□ -0.81
CUX1-204ENST00000393824 TMEM184BQ9Y519 407 aaPredicted RBP10□□□□□ -0.81
CUX1-204ENST00000393824 KIF26BQ2KJY2 2108 aa10□□□□□ -0.81
CUX1-204ENST00000393824 FRYQ5TBA9 3013 aa9.99□□□□□ -0.81
CUX1-204ENST00000393824 TRAV18A0A075B6X5 111 aa9.99□□□□□ -0.81
CUX1-204ENST00000393824 TRBV6-7A0A0A0MS04 114 aa9.99□□□□□ -0.81
CUX1-204ENST00000393824 IDSB3KWA1 339 aa9.99□□□□□ -0.81
CUX1-204ENST00000393824 NPIPB9F8W1W9 429 aa9.99□□□□□ -0.81
CUX1-204ENST00000393824 RAB3DO95716 219 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms