RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 RAB22AQ9UL26 194 aa16.84■□□□□ 0.29
CBX1-202ENST00000393408 PRELID1Q9Y255 219 aa16.84■□□□□ 0.29
CBX1-202ENST00000393408 NOP16Q9Y3C1 178 aaKnown RBP16.84■□□□□ 0.29
CBX1-202ENST00000393408 TMEM200CA6NKL6 621 aa16.83■□□□□ 0.28
CBX1-202ENST00000393408 OR6C76A6NM76 312 aa16.83■□□□□ 0.28
CBX1-202ENST00000393408 RAB27BO00194 218 aa16.83■□□□□ 0.28
CBX1-202ENST00000393408 SMAD9O15198 467 aaKnown RBP16.83■□□□□ 0.28
CBX1-202ENST00000393408 CSN2P05814 226 aa16.83■□□□□ 0.28
CBX1-202ENST00000393408 ZBTB25P24278 435 aa16.83■□□□□ 0.28
CBX1-202ENST00000393408 CD38P28907 300 aa16.83■□□□□ 0.28
CBX1-202ENST00000393408 CAPZA1P52907 286 aa16.83■□□□□ 0.28
CBX1-202ENST00000393408 HSD11B2P80365 405 aa16.83■□□□□ 0.28
CBX1-202ENST00000393408 ZP4Q12836 540 aa16.83■□□□□ 0.28
CBX1-202ENST00000393408 SLC25A42Q86VD7 318 aa16.83■□□□□ 0.28
CBX1-202ENST00000393408 FJX1Q86VR8 437 aa16.83■□□□□ 0.28
CBX1-202ENST00000393408 ZBTB8AQ96BR9 441 aa16.83■□□□□ 0.28
CBX1-202ENST00000393408 KCNK17Q96T54 332 aa16.83■□□□□ 0.28
CBX1-202ENST00000393408 NPAS1Q99742 590 aa16.83■□□□□ 0.28
CBX1-202ENST00000393408 PRRT1Q99946 306 aa16.83■□□□□ 0.28
CBX1-202ENST00000393408 VN1R1Q9GZP7 353 aa16.83■□□□□ 0.28
CBX1-202ENST00000393408 CNTD2Q9H8S5 307 aa16.83■□□□□ 0.28
CBX1-202ENST00000393408 SLC2A4RGQ9NR83 387 aa16.83■□□□□ 0.28
CBX1-202ENST00000393408 IGKV1D-43A0A0B4J1Z2 117 aa16.82■□□□□ 0.28
CBX1-202ENST00000393408 CPED1A4D0V7 1026 aa16.82■□□□□ 0.28
CBX1-202ENST00000393408 METTL21EPA6NDL7 271 aa16.82■□□□□ 0.28
CBX1-202ENST00000393408 MPZP25189 248 aa16.82■□□□□ 0.28
CBX1-202ENST00000393408 RAB12Q6IQ22 244 aa16.82■□□□□ 0.28
CBX1-202ENST00000393408 LIN54Q6MZP7 749 aa16.82■□□□□ 0.28
CBX1-202ENST00000393408 C11orf87Q6NUJ2 197 aa16.82■□□□□ 0.28
CBX1-202ENST00000393408 CD163Q86VB7 1156 aa16.82■□□□□ 0.28
CBX1-202ENST00000393408 OR6S1Q8NH40 331 aa16.82■□□□□ 0.28
CBX1-202ENST00000393408 NKD1Q969G9 470 aa16.82■□□□□ 0.28
CBX1-202ENST00000393408 MRGPRFQ96AM1 343 aa16.82■□□□□ 0.28
CBX1-202ENST00000393408 TPSD1Q9BZJ3 242 aa16.82■□□□□ 0.28
CBX1-202ENST00000393408 ARID1BQ8NFD5 2236 aaPredicted RBP16.82■□□□□ 0.28
CBX1-202ENST00000393408 IGHV1OR15-9A0A0B4J2B8 117 aa16.82■□□□□ 0.28
CBX1-202ENST00000393408 NPIPA5E9PKD4 350 aa16.82■□□□□ 0.28
CBX1-202ENST00000393408 CCSO14618 274 aa16.82■□□□□ 0.28
CBX1-202ENST00000393408 OR2F2O95006 317 aa16.82■□□□□ 0.28
CBX1-202ENST00000393408 LIPCP11150 499 aa16.82■□□□□ 0.28
CBX1-202ENST00000393408 CTRB1P17538 263 aa16.82■□□□□ 0.28
CBX1-202ENST00000393408 OR2F1Q13607 317 aa16.82■□□□□ 0.28
CBX1-202ENST00000393408 CDNFQ49AH0 187 aa16.82■□□□□ 0.28
CBX1-202ENST00000393408 C14orf28Q4W4Y0 310 aa16.82■□□□□ 0.28
CBX1-202ENST00000393408 RNASE10Q5GAN6 216 aaKnown RBP16.82■□□□□ 0.28
CBX1-202ENST00000393408 CTRB2Q6GPI1 263 aa16.82■□□□□ 0.28
CBX1-202ENST00000393408 ZNF813Q6ZN06 617 aa16.82■□□□□ 0.28
CBX1-202ENST00000393408 LYG2Q86SG7 212 aa16.82■□□□□ 0.28
CBX1-202ENST00000393408 PAQR4Q8N4S7 273 aaPredicted RBP16.82■□□□□ 0.28
CBX1-202ENST00000393408 TMEM185BQ9H7F4 350 aa16.82■□□□□ 0.28
CBX1-202ENST00000393408 MKL2Q9ULH7 1088 aa16.82■□□□□ 0.28
CBX1-202ENST00000393408 NPIPA1Q9UND3 350 aa16.82■□□□□ 0.28
CBX1-202ENST00000393408 FER1L5A0AVI2 2057 aa16.82■□□□□ 0.28
CBX1-202ENST00000393408 RHPN2P1A8MT19 583 aa16.81■□□□□ 0.28
CBX1-202ENST00000393408 HLA-GP17693 338 aa16.81■□□□□ 0.28
CBX1-202ENST00000393408 BDKRB2P30411 391 aa16.81■□□□□ 0.28
CBX1-202ENST00000393408 ARL4DP49703 201 aa16.81■□□□□ 0.28
CBX1-202ENST00000393408 DAP3P51398 398 aaKnown RBP16.81■□□□□ 0.28
CBX1-202ENST00000393408 CXADRP78310 365 aa16.81■□□□□ 0.28
CBX1-202ENST00000393408 FAM74A1Q5RGS3 127 aa16.81■□□□□ 0.28
CBX1-202ENST00000393408 C3orf33Q6P1S2 294 aa16.81■□□□□ 0.28
CBX1-202ENST00000393408 OGFOD3Q6PK18 319 aa16.81■□□□□ 0.28
CBX1-202ENST00000393408 LANCL3Q6ZV70 420 aa16.81■□□□□ 0.28
CBX1-202ENST00000393408 TRAPPC6BQ86SZ2 158 aa16.81■□□□□ 0.28
CBX1-202ENST00000393408 OR10K1Q8NGX5 313 aa16.81■□□□□ 0.28
CBX1-202ENST00000393408 RNF133Q8WVZ7 376 aa16.81■□□□□ 0.28
CBX1-202ENST00000393408 TMEM234Q8WY98 164 aa16.81■□□□□ 0.28
CBX1-202ENST00000393408 FGGYQ96C11 551 aa16.81■□□□□ 0.28
CBX1-202ENST00000393408 CMBLQ96DG6 245 aa16.81■□□□□ 0.28
CBX1-202ENST00000393408 ARL5BQ96KC2 179 aa16.81■□□□□ 0.28
CBX1-202ENST00000393408 BARX1Q9HBU1 254 aaPredicted RBP16.81■□□□□ 0.28
CBX1-202ENST00000393408 A0A1B0GW55 424 aa16.81■□□□□ 0.28
CBX1-202ENST00000393408 KANTRA0A1W2PQU2 76 aa16.81■□□□□ 0.28
CBX1-202ENST00000393408 C2CD4DB7Z1M9 353 aa16.81■□□□□ 0.28
CBX1-202ENST00000393408 BCL2L11O43521 198 aa16.81■□□□□ 0.28
CBX1-202ENST00000393408 IL2RAP01589 272 aa16.81■□□□□ 0.28
CBX1-202ENST00000393408 H2BFMP0C1H6 154 aa16.81■□□□□ 0.28
CBX1-202ENST00000393408 DUX4L2P0CJ85 424 aa16.81■□□□□ 0.28
CBX1-202ENST00000393408 DUX4L3P0CJ86 424 aa16.81■□□□□ 0.28
CBX1-202ENST00000393408 DUX4L4P0CJ87 422 aa16.81■□□□□ 0.28
CBX1-202ENST00000393408 DUX4L5P0CJ88 424 aa16.81■□□□□ 0.28
CBX1-202ENST00000393408 DUX4L6P0CJ89 424 aa16.81■□□□□ 0.28
CBX1-202ENST00000393408 DUX4L7P0CJ90 424 aa16.81■□□□□ 0.28
CBX1-202ENST00000393408 MMP16P51512 607 aa16.81■□□□□ 0.28
CBX1-202ENST00000393408 UNC119Q13432 240 aa16.81■□□□□ 0.28
CBX1-202ENST00000393408 C1orf189Q5VU69 101 aa16.81■□□□□ 0.28
CBX1-202ENST00000393408 MOB3CQ70IA8 216 aa16.81■□□□□ 0.28
CBX1-202ENST00000393408 OR52H1Q8NGJ2 320 aa16.81■□□□□ 0.28
CBX1-202ENST00000393408 PDCD10Q9BUL8 212 aa16.81■□□□□ 0.28
CBX1-202ENST00000393408 CST11Q9H112 138 aa16.81■□□□□ 0.28
CBX1-202ENST00000393408 DNTTIP1Q9H147 329 aa16.81■□□□□ 0.28
CBX1-202ENST00000393408 CENPMQ9NSP4 180 aa16.81■□□□□ 0.28
CBX1-202ENST00000393408 FAM206AQ9NX38 181 aa16.81■□□□□ 0.28
CBX1-202ENST00000393408 COMMD9Q9P000 198 aa16.81■□□□□ 0.28
CBX1-202ENST00000393408 DUX4Q9UBX2 424 aa16.81■□□□□ 0.28
CBX1-202ENST00000393408 RNF222A6NCQ9 220 aa16.8■□□□□ 0.28
CBX1-202ENST00000393408 LMO7DNF2Z398 122 aa16.8■□□□□ 0.28
CBX1-202ENST00000393408 GLULP15104 373 aa16.8■□□□□ 0.28
CBX1-202ENST00000393408 CD27P26842 260 aa16.8■□□□□ 0.28
CBX1-202ENST00000393408 HSD11B1P28845 292 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms